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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0139800 |
| Transcript ID | LotjaGi5g1v0139800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Lectin receptor kinase; TAIR: AT5G06740.1 Concanavalin A-like lectin protein kinase family protein; Swiss-Prot: sp|Q9FG33|LRKS5_ARATH Probable L-type lectin-domain containing receptor kinase S.5; TrEMBL-Plants: tr|K7LD58|K7LD58_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0139800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:34369183..34371804) extracted from Lotus japonicus Gifu genome v1.2.
CCAGGAATCATCCAAGAAAGAGAGGGTTTAAAAATCAGGGAAATGTCAAACATATACAAAAATATTTAATTCATTCCATT CTACCAAACTTCCCATATATATGTGGTTTATTGAAACAAAGAATGATCATGTATTTCATTAACATTCCACAAGTCAGAAT TGCCTTCAATTATCATCACAAATTCTCCAAATTAATTAGGCCATTTTTTGCCATTTCCACCTCCAAAACATGCACTTGTC TTGGCTAATCCGATATCAGTTATTAGCACTAATCTTCATTTTCATCACCCTCACCCAAGTTACCTCCTTATATTTCAACT TCCCTACCTTCAAACCAGAGGATGAAACTTCCCATTTACTCCTGAGCAAGAACTCAAAAATCTACCTAGATGCCATCCAA ATAACCCCTGATATTCGCGGCGCGATCGTGGATTATTCCGGACGCGCTTTCTACAAAAAGCCATTCAGACTTTGGAGCAA GAACAACAACAACAAAGTAGCTGCCTTCAACACCACTTTTGTTCTCAACATAACCCCCCAAACCTCCCCTGGTGGAGAAG GCATAGCCTTCATCTTAACCGCGGATCGCACTCTACCGCAAAACAGTGAAGGACAATGGCTTGGTATTGTGAATTCCACA ACCAATGGAACTTCACAATCTGCAATTCTCGCGGTGGAGTTTGACACCAGAAAAAGTTCCACAGATGATGGCCCTGACAA CCATGTTGGGATCAACATAAACAGCATACATTCCATCATACAGGTTCCACTCATAAACACTAGGGTCAATATTTCATCTG GTATAAATGTAACTATCAGAATTCAGTATGAAAATGATGTAATAACCGTTTTTGGTTCCATGACTGGAGCTTCAAACGGT TCCATGGAGACCCTCTTGGTATCTCCACCTCTTAATCTATCTTCCTATCTTCAAGAAGAGGTTTACTTGGGTTTCTCTGC TTCAACAAGTAATTACACACAGTTGAACTGTGTAAGAGCATGGGAATTCAACGGTGTAGATATTGCAGACGGTGATAAAA ACCTGGTTTGGGTTTGGATCACAGTACCAATTATTACAGTGATTGTCATAGGTGGATTGATCTTGTTCTTGGTTTTTCGC CAAAGGAAACGCCGCGCGGAGAATCCAGAAGATGCATATCCAAGAATAGAGGATCAAATTCAACATTCCTCATTTTCTCC AAAGAAGTTTCAGCTGAAGGAGATGAAAAAAGCAACAGGTGGATTCAGCCCTCAAAATAAACTTGGGGAAGGTGGATTTG GAACTGTCTACAAGGGGGTATTAGGAAACAATATGGAGGTAGCAGTGAAGAGAGTGTCCGAAAACTCGCGGCAAGGGAAG CAAGAATTCATAGCAGAAGTGACAACAATTGGAAGACTTCACCACAGAAACTTGGTGAAACTCATTGGCTGGTGCTACGA GAGCAAAGAGCTTCTACTAGTCTATGAGTTCATGCCTAATGGGAGCTTGGACAAGTACCTATTTGGCGATCAAAAACTCG GTAATAACAGCATCGGATGGGGACTTTCTTCAACACTGAATTGGGAAACTCGACATGGTGTGATTCATGGTGTGGCACAA GCACTGGACTATCTCCACAACGGTTGCGAAAAGCGGGTGCTTCATAGAGATATCAAGGCAAGCAACATCATGTTGGACAC CGATTACAACGCGAAATTGGGGGATTTTGGACTAGCGCGTACAATTCAAAAGAGAAATGAGACTCACCACTCCACCAAGG AAATTGCGGGGACACCGGGTTACATGGCGCCGGAGACTTTTCTCACGGGGAGGGCGACCGTAGAGACCGATGTTTACGCG TTTGGGGTTCTTGTGTTGGAGGTAGTTTGTGGAAAGAGGCCAGGGAGTATGTTTGCACAAGATGACTATAAAAACAGCAT TGTGTATTGGGTTTGGGAGCTTTATGGAAAGGGGAGAATAGTTAGTGCTGTTGATTCAAGGGTAAGTAAGGAGGAGGAGG AGGTGATCAAGGAGGAGGAAGTGGAGGATTTGCTTGTTCTTGGGCTGGCTTGTTGTCATCCGAACCCACACCGGCGGCCG TCGATGAGAACTGTTCTGCAGGTTCTTAACGGGGAAGCGCCGCCGCCGGAGGTGCCGCAGGATAGACCTGCTTTTATGTG GCCCGCTATGCCTCCATCTTTCAAAGAAAATGAAGATAGCTCCCTCATACAAGGATCACTTACAGCATTCACTGATATCT CTGGGAGATAATTAAAGTTACTTAGGTTCATGACCAGAACTGGTTTTAGTTGGAATATATAGTTCTTGTATTTGCTGATA AGTTTTTATACATCAGTGTGTAGTTCAGCTTTGATATATATTTGCAAACAATTTTTCTTTTGTGTAAATTTTAGATCGTC ATCATCATCATTGGATCCTTGTACATATAGAATTATAGATCCTATTGATTTGAAATTGATCTCTACACTCCACCCATGTA TCTGAGAAATTAAATGAATTTGTTCTTGGACATTTCTATATATGGATGACCTCGTTCAGTATATTTGAGGCTGTTAAATC TACAAAAGTAAGCATATATAGATGGGAAATTATTAGTTGAACGATCAGAACACAAACGAAAC
CDS sequence (LotjaGi5g1v0139800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCACTTGTCTTGGCTAATCCGATATCAGTTATTAGCACTAATCTTCATTTTCATCACCCTCACCCAAGTTACCTCCTT ATATTTCAACTTCCCTACCTTCAAACCAGAGGATGAAACTTCCCATTTACTCCTGAGCAAGAACTCAAAAATCTACCTAG ATGCCATCCAAATAACCCCTGATATTCGCGGCGCGATCGTGGATTATTCCGGACGCGCTTTCTACAAAAAGCCATTCAGA CTTTGGAGCAAGAACAACAACAACAAAGTAGCTGCCTTCAACACCACTTTTGTTCTCAACATAACCCCCCAAACCTCCCC TGGTGGAGAAGGCATAGCCTTCATCTTAACCGCGGATCGCACTCTACCGCAAAACAGTGAAGGACAATGGCTTGGTATTG TGAATTCCACAACCAATGGAACTTCACAATCTGCAATTCTCGCGGTGGAGTTTGACACCAGAAAAAGTTCCACAGATGAT GGCCCTGACAACCATGTTGGGATCAACATAAACAGCATACATTCCATCATACAGGTTCCACTCATAAACACTAGGGTCAA TATTTCATCTGGTATAAATGTAACTATCAGAATTCAGTATGAAAATGATGTAATAACCGTTTTTGGTTCCATGACTGGAG CTTCAAACGGTTCCATGGAGACCCTCTTGGTATCTCCACCTCTTAATCTATCTTCCTATCTTCAAGAAGAGGTTTACTTG GGTTTCTCTGCTTCAACAAGTAATTACACACAGTTGAACTGTGTAAGAGCATGGGAATTCAACGGTGTAGATATTGCAGA CGGTGATAAAAACCTGGTTTGGGTTTGGATCACAGTACCAATTATTACAGTGATTGTCATAGGTGGATTGATCTTGTTCT TGGTTTTTCGCCAAAGGAAACGCCGCGCGGAGAATCCAGAAGATGCATATCCAAGAATAGAGGATCAAATTCAACATTCC TCATTTTCTCCAAAGAAGTTTCAGCTGAAGGAGATGAAAAAAGCAACAGGTGGATTCAGCCCTCAAAATAAACTTGGGGA AGGTGGATTTGGAACTGTCTACAAGGGGGTATTAGGAAACAATATGGAGGTAGCAGTGAAGAGAGTGTCCGAAAACTCGC GGCAAGGGAAGCAAGAATTCATAGCAGAAGTGACAACAATTGGAAGACTTCACCACAGAAACTTGGTGAAACTCATTGGC TGGTGCTACGAGAGCAAAGAGCTTCTACTAGTCTATGAGTTCATGCCTAATGGGAGCTTGGACAAGTACCTATTTGGCGA TCAAAAACTCGGTAATAACAGCATCGGATGGGGACTTTCTTCAACACTGAATTGGGAAACTCGACATGGTGTGATTCATG GTGTGGCACAAGCACTGGACTATCTCCACAACGGTTGCGAAAAGCGGGTGCTTCATAGAGATATCAAGGCAAGCAACATC ATGTTGGACACCGATTACAACGCGAAATTGGGGGATTTTGGACTAGCGCGTACAATTCAAAAGAGAAATGAGACTCACCA CTCCACCAAGGAAATTGCGGGGACACCGGGTTACATGGCGCCGGAGACTTTTCTCACGGGGAGGGCGACCGTAGAGACCG ATGTTTACGCGTTTGGGGTTCTTGTGTTGGAGGTAGTTTGTGGAAAGAGGCCAGGGAGTATGTTTGCACAAGATGACTAT AAAAACAGCATTGTGTATTGGGTTTGGGAGCTTTATGGAAAGGGGAGAATAGTTAGTGCTGTTGATTCAAGGGTAAGTAA GGAGGAGGAGGAGGTGATCAAGGAGGAGGAAGTGGAGGATTTGCTTGTTCTTGGGCTGGCTTGTTGTCATCCGAACCCAC ACCGGCGGCCGTCGATGAGAACTGTTCTGCAGGTTCTTAACGGGGAAGCGCCGCCGCCGGAGGTGCCGCAGGATAGACCT GCTTTTATGTGGCCCGCTATGCCTCCATCTTTCAAAGAAAATGAAGATAGCTCCCTCATACAAGGATCACTTACAGCATT CACTGATATCTCTGGGAGATAA
Protein sequence (LotjaGi5g1v0139800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MHLSWLIRYQLLALIFIFITLTQVTSLYFNFPTFKPEDETSHLLLSKNSKIYLDAIQITPDIRGAIVDYSGRAFYKKPFR LWSKNNNNKVAAFNTTFVLNITPQTSPGGEGIAFILTADRTLPQNSEGQWLGIVNSTTNGTSQSAILAVEFDTRKSSTDD GPDNHVGININSIHSIIQVPLINTRVNISSGINVTIRIQYENDVITVFGSMTGASNGSMETLLVSPPLNLSSYLQEEVYL GFSASTSNYTQLNCVRAWEFNGVDIADGDKNLVWVWITVPIITVIVIGGLILFLVFRQRKRRAENPEDAYPRIEDQIQHS SFSPKKFQLKEMKKATGGFSPQNKLGEGGFGTVYKGVLGNNMEVAVKRVSENSRQGKQEFIAEVTTIGRLHHRNLVKLIG WCYESKELLLVYEFMPNGSLDKYLFGDQKLGNNSIGWGLSSTLNWETRHGVIHGVAQALDYLHNGCEKRVLHRDIKASNI MLDTDYNAKLGDFGLARTIQKRNETHHSTKEIAGTPGYMAPETFLTGRATVETDVYAFGVLVLEVVCGKRPGSMFAQDDY KNSIVYWVWELYGKGRIVSAVDSRVSKEEEEVIKEEEVEDLLVLGLACCHPNPHRRPSMRTVLQVLNGEAPPPEVPQDRP AFMWPAMPPSFKENEDSSLIQGSLTAFTDISGR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 10 | 10 | - | – | |
| Phobius | 1 | 26 | 26 | - | – | |
| TMHMM | 5 | 27 | 23 | - | – | |
| PANTHER | 10 | 661 | 652 | 7.9E-285 | – | |
| PANTHER | 10 | 661 | 652 | 7.9E-285 | – | |
| Phobius | 11 | 21 | 11 | - | – | |
| Phobius | 22 | 26 | 5 | - | – | |
| Gene3D | 24 | 271 | 248 | 2.4E-60 | – | |
| SUPERFAMILY | 25 | 263 | 239 | 8.86E-51 | ||
| Phobius | 27 | 272 | 246 | - | – | |
| Pfam | 27 | 266 | 240 | 1.3E-61 | ||
| CDD | 27 | 261 | 235 | 1.07673E-62 | ||
| Phobius | 273 | 296 | 24 | - | – | |
| TMHMM | 274 | 296 | 23 | - | – | |
| Phobius | 297 | 673 | 377 | - | – | |
| Gene3D | 313 | 414 | 102 | 4.5E-37 | – | |
| SUPERFAMILY | 320 | 626 | 307 | 5.8E-81 | ||
| ProSiteProfiles | 339 | 642 | 304 | 39.17 | ||
| SMART | 339 | 626 | 288 | 9.7E-41 | ||
| Pfam | 342 | 624 | 283 | 9.7E-51 | ||
| CDD | 345 | 628 | 284 | 2.80839E-92 | – | |
| ProSitePatterns | 345 | 367 | 23 | - | ||
| Gene3D | 415 | 632 | 218 | 3.4E-60 | – | |
| ProSitePatterns | 470 | 482 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. | ||
| Molecular function | Carbohydrate binding | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates. |
Expression pattern of LotjaGi5g1v0139800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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