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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0161900 |
| Transcript ID | LotjaGi5g1v0161900.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Pentatricopeptide repeat-containing protein family; TAIR: AT5G39710.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710; TrEMBL-Plants: tr|A0A1J7GN86|A0A1J7GN86_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0161900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:41532639..41544755) extracted from Lotus japonicus Gifu genome v1.2.
CTTTGACTTTGAGTGGTGTTGGATCTCAAGTTCACTTGAGAACACAAACACAAACAAGCGAGGGTTGTAGAGAGAGAAAG CCAGAGGAAAGGTAACATTTTCGCCGCCACAACACAATGAGTCTCCTTCTCCGTGCCTTTCGCCGCCACATCGTCCGGAA CAGCGGCATGACCCGCGGCTTCACCGCCGCCGCCGCCGCCGGGAGCTTGGAATCAGAACCGAAGAAGGTGACATCTGGGG GGTTGTTGAAGACAACAACGACTGTGTCGGAGATGAATCGGAAGGGTTTGGACCCTGCTCGTGAGTCTCTGATTCATTTG TTATGCTGCGACCAGTTGCAGAATGATAATGCTTATAAGGTGTTGAGTGAAATGGTTAATAGTGGGTTTTTGCCCTCGGT TGCTACATACAACGTGCTTCTTCATGCATATTGCCGTGATAAGAGGGTTGATGAGGCCATGGGGATTTTGAGGGGCATGG CAGTGGAACCAAATGTGGTTTCTTTCAATACCGTTATTGACGGGCTTTGCGCGAAAAGGAGGATCAAAGAGGCTGAGGAG CTGCTTCAGGAGATGAATTCCAAGGGTTTGGCCCCTGATTCTGTCACTTACAACACCTTGATCACTGCCATGAGTAAAAA TACTAACCTTGTCATTCGTGCTATTGCGCTTTACGATCAGATGAAACAACAACGCATCCCTGTTCCCTGGACCACTTACA CGTCTCTCATTCATTTGCTCTGCACTTACAATGTAGATAAGGCTTATAAGGTTTTCACTGAAATGATTGCTAGTGGCTTT GAGCCCTCGCTTGTTACATACAACGAGCTTATTCATGCATATTGCTGTAGGGACAGGGTTCAGGATGCTATGGGGATTTT TAGGGGTATGCCTGACAGGGGTTTGACCCCTGATGCTGTTATTTGTAACACTCTAATTACTTTTTTTTGCAAATACGGGG AGCTGGAAAAGGCCTTTGAAATGAGGGCTGAGATGGTTGAGAGGGGCATCTTGCCTAATGCTGACACGTATTCAAAGCTT ATAGATTGCCTGTGCCCACAGCGAAGACTGTCAGAAGCTTTTGATCTCTTCCGAGAAATGCTAGGTGGGGGGCTGTCGCC ACGTGAATATGCTTATTTTAATTTGGTCGGTGCTTATTGTCTTGTAGGTGAATTCAGTAAGGCTTTTCATTTGCGTGATG AAATGATACACAAGGGGTTTTTGCCTGATTTTGTTACTGAGTTTTCACCATCTCTTGTTACATACAACGCCCTTATTTAT GGGAATTGCTTGTTGGGAAGGGTTGAGGAGGCTCTGGGGATTTTGAGGGGCATGGCTGAGATGAGCTTGTCCCCTGATGA TGTTAGTTATAACATTGTTATTTCCGGGTTTTGCAAACTCGGGGAGTTGGGGAAGGCGTTTGAATTGATGGTGGAGATGG ATGAAGCAGGGGGTATAAGGGGGGTGGATCTAGCCGTGTTTTCATCACTTATGAAAGGCCTGTCGGATGAGGTTAATTAT AATAGTGTGATAAATGCTTATTGTGCTGAAGGTGAAGTGTCTAAGGCTCTAATATTGCATGATGAAATGGAACACCATGG TTCTTTGCGAGCTTCTGTTCTCTATATTATGCTTTTTGATGGATTTGATAAGAAAGCTAGGACAAGGGGAGCTAAGGAGT CCCTTCTGAGGATGTTTTATGATTTGTGTACGAGTCTGCCAACTTTCACATATGATACTCTGATAGAGAACTGCAGTAAT AATGAATTTAAGAGTGTGGTAGAGCTTGCCAAAGGTTTCGGGATGAGGGGTTTAAAGAATGAAGCTGCCAGTGTTTTGAA CACAGTGCTTCAATGGAATTATAAGCCAGATGGAGCAGTTTATAATTTTTTAATTGTTGAACATTGTAGGCGTCGTAATG TTGATAAGGCGTATAATATGTACATGGAGATGGTACATTATGGTTTTGCTTCTCATATGTTCTCTGTACTTGCTCTTATT AAAGCCCTATTTCATGTTGGAAGGCACAATGAGGTAAGGAGGGTCATTCAAAATGTATTGAGGAGTTGTAATATCAATGG TTTTGAGCTACATAAAGCACTTAGTGAAACTGGTGTCATCGTCAGGGAAGATAAAGTGAAAGATGTTCTTTTGAATGTGC TAGCTGAAATAGCGATGGATGGCCTGCTACTTAATGGTGGAAAGTGCTCATATGCTCCAGCAAACTCTGTTGCCATAAAC TTTAAGTAGAAAACTAGGAATTGTTTTCATGACTGGACAATTGCTGCTGCAGGCAGTTAGAGGGCAGGTGGGTGTAGTTA GTTATTAGAAGTTATTTGCCTTGATGTATAATTATGTTTGAATTTTAAATTAACTGCACCAGGGTATTTATAAGTAAGGT CTGGAGAGATTCATGCAACTCTAGAATTTCCTGCTATGTAACATATTTCTGTGGAGATTCTTCATCTCTACTACAACTAT AATGAGTATTTCCCTTCAACTCTAGAATTTCCCAGCTATGTAATATCAAAGTGCCATGTAAATGTAAGTGAGAACTTAAA GCAGACAGAGGCTGCTGCATTCCACTTAGGCGCAATAACGACATGATTTGCTCCAATTACATCATTTTGGAACTTAAAGC AGACAAAGGCTGTTCCATTCCACATAGCCGCAATAACCACATGATTTTCTCCAATTAAGTCATTTTTCTTAGTACTCAGA TAAAAAGAAGATGAAGGAAGTAGTTTAGAGTGTTGTAAAGACAAGAAAAACTACCTCACATGAAATGTTATTATGTCTTT AAAGGAAATTATTAATCCACTTTGGAGTTAATTGGGGCAAAAATAAACAAGTACAAGAAATTGGGGAGGTTTGTTAATGA TGTGCACAAGAAAGTTAGAGGGCAGTTGGGTGTAGTTAGTTATTAGAAGTTATTTGTCTTGATGTATAATTATGTTTGAG TTTTAAATAAACTGCACCAGGGTAGTTAGTTATATGTAAGTTGTGCGGAATTTAGATAACTATTCAGAAGTTAAGTTGCT GGGTTGTTATGAAGAGATGCAGACAACTCTCAAATTTCCTGCTATGTCATATTTTCAAGCCAGCCATGAAGAAAAGACAT TATAAAGAGCTAGAAGCTGAAGAGAGAGCTTCAGAACTCAGATTGGCATCCGTTCAAACAAAGGTGCTATAATTGAAGGG AAAGAAAAGGTATATATGTATTTGTTAAACATAATCGTCCCTCTGAAATTATCCTCAACTCTAGCTAGCTGTACTTTGCA TTGCATATCCCTCTTCTTAATCAAATTTGGTCTGTCTGCTATTATGTTTCATTCCCTCTTCATGAAGACAATGGATTTGT TGATGACCACTGTACTTTAGATTAAAGCCATTGGGCCTGTTTTCACCTAGTGTAAACTATATAAAGAACTTCCATACTTG ATTTTGGTCAAATCCTTGCAAAATCTTAATCGGGGTAGTTTTGGTTTTTTGGGTGTATTAACTTTGAGCTTAATTGTTTT GTTTTGTTGGTTTACTTGAATGAGAACCAATTATGGTGTCCGTCATTCCTTTCCTCTGTTTCTACTTTCTATCTTCTTCT TCCCTCTCTCAGATTCTGACCTATCACAAATTATCCTTGATCATGCCTGTTGGAGCTGTGGGCTTATTTTTTAATTTTTT TCTTTTGCAAGTGGTGATCTTCCCTCCTTTTTTTTAACATAATCCATTTTTTTGCTTTGAATTGCTATACAAGTTTGATT GTAGATTTAGCTTTCTTTGATAGCTAAGTAGTCATGGCTGGCCGACATTCATGATGGATTTAGTATTAAGTTACTCAGTT CGGTTGCATTTTTACATTTATATGTATTGTTATTTGTTTGTTTGTGGCTATAACCTATCAAACAAGACTACTTAACTGAG AAGTAGTAGATTAGGTCACTTGCTACTACTATAAAATCCAAGAATTTAAATCCTCAATCCTGAATGAGTTTGTTTCATGA CCAGCAAGTTTTTCAGCATGTTGACAAAATCATGTCAAATCTCTTCAATCCTGAATTAAGTACATATATTTTCAGGATGG CTCTATGATTTACTAAGTTTGAGCACAGGCAGGTTCCCCTTTGTTGCATTTCTTCTCCAACCTTCTGAATTTATTTTCTT GTATGTGGATGTTTAGAGATGATGTAGATCCCCCCCCCCCTGGAGTCATTTGCCTCAAAACAGGGAGGCTGCAAGACATT CTATATATTTCTAACTAATTCAGAAATTGTTTAGAAGTGAATGATATTATAGCTCAAATTGGAAGTAAAAAATTGTCAAG TTTATTTGTATTTTCTTCTTGTCTGTGAAATAGGCTTATGTGCAGCAATAAGAATCAAGTAGATTAAAGTTGACCCAACT TAAACAAAGACCTCGCATAGTTCTTTGTTTTCAATAAGTGATATTCCATGCCTTTTATAGATTAGTATGTTTGTTATATG TATAAGGTGTTTGTTCATTCTCGTGGTCAATTTCGTACTTACAAATATTCTTTGTCTATTCCAGCAAAATGTCGGAATAC ATAACCGTTTGTCCCCTGATGCTGTTACTTATAACACTGTAATTGCTAACTTTTGAAATGAAGACGGAGATGGTTGAGAA GGGCATCTTGCCTGATGCTGTCACGTATTGGAATCTTATACAGGCCCTGTACCCGCAGCGAAGACTGTTGGAAGCTTTTG ATCTCTTCCGAGAGATAGGCTTATCCCCTGATGCTGCTAGTTATAGCAGTATTATTTCTGAGTTTTGCAAACTTGAGGAG CTGGGAAAGGCGTTTGAATTGAACATGGATATGGATGATGGTATCTCGGGGAGCCGTGTATTCATCACTTTTGAAATTGA CAACCTCTGGGCGTGGGAAGGTAAAATTAAAGATGCTCTTTTTAATGTGCTAGCCGAAATAGCAATGGATGGCTTGCCAC TTAAGGGTGGAATGTGTTCATAAGCTCCAGTGAACTCTGTTACCATAAACTTTAAGTAGAAATTGTTTTCTGTGTGTTTT TTAAATCAGAAGGTCTTTCTTACTGTTGCTAATTTGCTTTCAGGACTACAAAACTGCTGCTGCAGGCAGTTAGAGGGCAG TTGGGTGTAGTTAGTTATTAGAAATTATTTGTATTGATGTATATTCTGTTTGAATTTTAAATAATTAAACTGCACCAAGG TAGTTATAAGTAAGTTGTGCAGAATTTAGATAACTATTCAGAAGTTAAGTTGCTGGTTTGTTATGGAGAGATTCAGGCAA CTCTAGAATTTCCTGCTATGTGACATATTTCTGTAGAGATTCTTCTTCCCTACTACCACTATACATAATGAGTTTTTCCC TTCTATCTCTTCTTTATCTTATTGAAGTGCCAAGTAACAGAGAACTTAAAGCAGACAAATGCTGTTCCATTCCACATAGC CGCAATAACCACATGATTTGCTCCAATTAAGTCATTTTTCTTAGTACTCAGATAAAAAGAAGATGAAGGAAGTAGTTTAG AGTGTTGTAAAGACAAGCAAAACTACCTCACATGAAATATTATTATATCTTTTAAAGGAAATTAATTCACTTGGGAGCTG GGGCAAAAATAAACAAGTACAAGGCATTGGGGAGGTTTGTGAATGATGTGTTCGAGAAGATTTTGGCCTTTACTACAAGT AAGTTGTGGCAGAGCCACAGATTACGAGCATGTTTAGTATATATAGTTAGAGTAATGCCCCAAAAGTTCCACTATATTAA AGTTTCAGCTGCTTTACTTGCTAGTCTCTCATGAATGATAATTAGGGAAACAGAACTTGCATGGCCAGATATTGCCATTA TTCCACATAATGCTATAATCAGGGGAAATTTTATTTGAAGTTCCATATATTTTCATTGAAGAAAATTATTCAGACAAAAG CTAGGTGGTTACACTGCTTTAGAGTCGACCATGCATTGCTGCCATTAGAGTAGCTTAATATTATTTGAATATTTGTATAT ATATATATATATATATTGATATAAACCTCAATGCTAAAATCATTCAGCTTAAAAAACATATATATATATATATATTGATA TAAACCTCAATGCTAAAATCATTCAGCTTAAAAAACAACAGGATATGAAACAAAAGCTGGAATTGGAGATTCTACTGCTA AGAGGATCACTAAGTGTGTTGAAGCACATAGAAGATGATGATGCAGAAGTTCTGAGAGAAGAGGAGGAGTCAGTTCAAGT CATAGATGCATTGAACCAAGCACTAATCATCAGAGAGATCGAGGAAGAGTAATTTTGAGCTTCGAAAGGAATTGATGGAT GTAAGTGTACTTTTTCTGATATTTCTTCTCTTAATTTCCACTTTACTGGTTCTTTATATTATTTTGGAAATTCAAAGAGC TAGCCCCTGTTCAACAATGTCCAGTTTTACACTTCATGTTTAAATTATATGCTCGCAATGTTTTGAATGCAGATTTTTCT CACTCATTCTAAGTGTTATAGAGCACTCCTCTCTTTTTTCTATCTGGTCTAGTCAACTCTATTTTGGTACCTTTTATGGT TCAGTGCAAGTTAGCAAAGTGACTAGAGTAAAATAAAATCCTGTCGTATCTAATAGATTTATATTACTCAATGTGTTTGT TATTAATGGTCGATCTGATTGTGAAGACGAGACTTGACTTAACTGTGATTGTGTGGATATCCATTCACTGCTTGTATGTT ACATTTTTATCATGGGCTTATCTCTCTTGCTCGATCAATCCCATATTAGGCTAAAGAGAATGGGGGGACTAGACACTGGA CCATTCTTTGAACCCAGCCATGAAGAAAAGACAGAATAAAGAGCTAGCTAGGAAGCTGAATAGAGAGCTTCAGAACTCAG ATTGGCATCCTTTCAAAGTTACCATAATTGAAGGGAAAGAAAAGGTATATATGTATTTGTTAAACATCTAAGTCCCTCTG AAATTATCCTCAACTCTAGCTAGCTGTTTCTTTGCAATGCATATCATCACTGTTAATCAAATTTGGTTCATCTGCTATTT ATTTTCATTTCCTCTTCATGAAGACATTGGATTTGTTGATGGCCACTGTACTTTAGGTTAAAGCCATTATGCATTCTTAA CCTGTAGTCCTTTCACCTAGTGTAAGCTATATAAAGAACTTCCGTACTTGATTTTGGTCAACTCCTTGCAAAATCTTAAT CAGGTTGTTTTGGTTTTTTGTGAGTATTAACTTTGAGCTTAGTTGTTTAGTTTTGATTTGTTGATTTAATTGAATGAGAA CCAAAACGAGTATGCCTCCGATTCACCTCTACTAACCGGAACCTAAATTTGTATGTTAGCCATGTTCTCGCTCTTGTTCA TCACTTATTGTGATTCATGAGGTGGCTCTAAAGTAGGTCATGAGAATGAAGGCTCTGAAACCATGCATCTAAGAGAAGCT CATTCATCATGCCGTCAAAATCCATCTGAAACCTATGAGAGTACAAAGTTAAGATATTAATTGAGGTGCCCACTAGGATG GACCATTAATAATTTGGTCTACCGGTGCACCATGATTTATCACCATTAGATCTTAGCATCTTGGAATATTCTTTAATCGT ATGGTCAAGATTTGATGGATGAAAAAAGGGTAGAAATGTAAATGTCAAACACTTGTTCCCCACCCCTTCTCCTTGCCGGA ACTGAATCACCACTGAATCCCTAAATCTCTGTCCATGAGCACTACTTCCATGAACAAACACTTCCAACATATTCTTTTGA AGACAAATCCAGAATCAAGAAAGATTAAAGAAGAGTTGAAAAGGACTATTGGCCTGTTTGCATCAGAGTAAAGTGCAAGA AAGAAGCAGATATTTTTATACTCTTGACATTTTCACAACAAGTGAACTTTAGCTTGAGATTAAAAAAAATAAGAACAAGA ATCTGTCTTCCGTTTATATCAAAGATGTTTTTTCAACCACTATTTTCTATGCTCTACATTTATGGGATCCATATATACAA AAATCCCATTATACAAAGCAAAAATACAGTTCAGCAACAACAACTATAAAAAAGAAAAATAAAAAATTGACCGAAACAGA ACTGATATAACCAGTCAATAACAACAACCAGCAACCTCAAAAAACAATCCTTCTACCCAGTATGCCTTGGCACACCACAA AAGGAAACAGGGAAGAATTAGATTTTGGTTCAAAACGGCGTCGGATCAGGCAACCTCCGGCGGAGAAGGGACGTTGAGGT TAAGATCCAAGAGTCACTGTGCGAGGCGGCGGCGAGTGTAAAATCAGCCACCGGGAGATCGAACCCGCACATCTCGCGGT GACCAATGCTCAGCATGGTCTTCGGACGAGCAAACGCGTTGAAGAACATCACGGGACGTGCAACCGAAAACGCAAAAGCT CCGTTGCCAGAACCAGCGTGGGCGGAAGCTCGAATCAGAGATGTAGGTGAAGAGCTCGATCTGGGCACATAGGGAGTAGG TCGTCAGAAGGATGAAGGTGAAGAGCTCGATTTGGGCACACAGGGAGACCATCGCCGGAGAGATGGGCGGCAGGGATGGG AGGGGCAGAGGGGAGAGTGGGAAGAGAAGGAGAGCAATTACAGAGCAAGTGAAGGGAACATGAAGAAGAAAAGGGTAAAA ATAAGTGAAAAACCAAAATTGTCCTCTGTTCCACCGGTGGACCAAAATACAATTAGCCCACCCTAGTGGGCACACCATTA ATTGACATACCAAGATTGTTGACATTCAAACCAAAGAAAGTGAGGACCACACCTATCTATACCTTATTATTTAGGTAGCC TCTTACACTGCTTTGAGTGACCATGCATTGCTGCGATAGCTGCATTTTTCTCTGCTTGTTTCTTACTGTTGGCAGGTTCA CCAGTAAATATATATTCTAACGCAAGAGGCGTGGTGACACGCGTAAACATAAGAAAAACATGGAACCACTATGGGCGGAA AACTCTACTCACCAACACAGCTGCATTCATAGGAAATCAAATCCGAGATTTTGCTCAGGTTAGAACAACTCGGTGTCAGT TGATATATGCACTTGGTGGTTGCAGAATCAATTCTGAGAATCAGCTTCTGGGTCCAGAATCGGTTCTGATAATAGAGAAG CTGATTAAAACATGTTATGAATAGATGAGGTATGAGGGTACACAAAGATAAAAGTAAAACAAGGTTCCACTGCAATAAAT GAATGTGAATAACCAGTCGTGTGTTTTTGGGTATCTCTATCTCAATTGTGACATATACTTGCAGTTTTCTGATTGTAGTG TCTCTAGAAAAGAGGACCTACCTCATAAATAACTATTATATACTTGGGATGAACTGTGGTCAGCTTTAATTCTGTCCAAA CATTAAACAAACACCAAATAGCACCTCATGAGTCCTTCTGCAGTTCCGTTTAAGACTGCAACTCATAAAAATGGTTAAAG ATGATTATTCTCGGGCTCTGTCTGTTTAATTACTGAAGCAAAGAGTTAAGCCCTCTTTTCTAGTCATATTGAGATTATAA GATTTCTTATTTACTTCTAACATTTGATTCAGTGGTTTTAAGTGCAAATTAAAACACATCACATTTTACTCTGCTGATAA ATACAGTTCATTTCCCAAGGCAGATAATTTTCTGAAATTCATAGTTTACTGATAGCCCACTCAAGTATTTCCTATTGAGT AGATTTTGGGTTAATTTCACTGGCACTATTTTGTTTTCCACGATTCCCACCTTTCAGAGGGAAGCTATATTGCTATAAGA TATCATTTTGCTATCATGAGCTCTAATTTTCCTGTCTCATTATGATACTATTTCCAACTTCCAAGGTTATCTACTGCTTG GATCTTTGCATGATGATGGTTAAAAAGTGGATTTTGGTGGACCTGCTCAATCTGATTAAGAAAAGGGTTGGTTTCTGTGT TGCACAGTTGCAGCATTCAAGTCTTCTCATTATCTTCGCTGTCTTCACTATTTTTTGATGTCTTTATAAGCATGACTTTT AATCCATGAACCAACTATATTTTAATTTTCTGTTTTCTGTGCATTCTTTTTAGTCCATGTTGTTTATGATGCATATGACT TGGAAGTATAGGTGTGGTTTCATTGCAGTAGTAAGTTCCAGAAAATATATGGAGTTAATGGTTGCGTTTGGTGTTGGATT GTTCCGAACAAATGTGCTTTAACCCCATCTCAGTGTGTTTGGTAGTGTATGGTCGTTGGTTTCTAATGACTTAAAATTGT TACCGATTGTTGATAAGGATTTAGATTTGAATATTGGCTTGAGGAATTATTATTGCACTCATAATTTAATAGTTTCTGTT TTTATATACCAAGCGGGATAAAACAAAATATATAATTTTGATTTGTAATCATTCTACTGTGTTTGGGTTAAGGACGTATC TCTATGGATTTAAAGGTGACTTATCGACTTATTTTAACTTATGGAAAAAATTCAATTAAGGGGAATATATCTCTATGGTG ATTCACTTATTGTGTACTTATCTCTCTCTGTATTTAGTCTTCTGGAACTTCTACAACCACTTCTTTTTCCTCTGTCACAT GTTCAGTTTATTGGTTAATGTAGTTTTCCTTATTCCTTTTTCCTCTTCAAAAGAACATGGAAGTGATAATAAATGCAATG GTGACATGAAATAGACTTGGTCTGCAGTGGTTGAGCTAAGCTTGATATTGCAAGATGTTAGAATTCTAGGATTCCAATTC TTATGTTTTAACTACTAAATTTAAGCCTTTGAAAGTTGGCAAGCTATAGCAATCAAGAAGAGGTATTCTTGTGGTAGAGT TATATAGCTGACCTCTTATATATTGAACTCTTTTCTCTTCCTCCTTTTGGTTATTTTCTTTAAATGATGATGTTTCCATG AAATTAAGCTCAATTATTAAAGACCGCATTTAGAATGATGAGGACATGAGAGTTTTAGTATCTAAGCTTTCATCTCCTAT TTCATCTCAACTCCTTCAACAGCATCTGAATGTATTTTTTCCTATCTTTTATTTTAATTGTTTTCTGAGCTTAGGATGGT TAATTACTTTTCTGTTCTATTTCAGGGAACTCTTCTCAGACCTTGGTGGATTTAACTTGTGGTTCTCTTTTCACAATGAA CCTTGTGCAATTGGTCTCCAAGAAGCACTTGGATATTGAAAAGGAAGAAGATGACAAGATGTATCTATTATGGAGAATGG GAGCACGAGTCTGTTTGGCTTATGTACGGAGGGAAGATGTATTGCGGTGTGGTGGCACTGGAATGTCGATGATGGAGAAA GTGAGCCATTTTTATCCCTTCTTTGTAAGTAGTGTAAACATGAAACCAAATCTAGGGAAAAGAGTAGCATATCATTTGTT GATGACCTTTGATTGGTGGTCTTAGCTAACATGGGATTTAATTTAGAACTTTATTTGTGGGCTTCTATTACCCATCTACT GTGTATGTGAGTGTGAAATAGAAGGCATAAGAGCATGCCATGGACATCCAAGCTGGTTTGTTTCTTGGGGGGCTTTTTCA AATTGCACATTGCACAATTACTCAACATAAATATTATAGCATATTACTGTTAAGGGGTCTTATAAATGGGGACGGAGGGA GAACTTTGTAGAGAAAATCAACTTATCATTTTCATTCTTATTCAGAGTATATTCTCTGTTTCATATGCTTCCTATGATGA ATATTTATCACTGATTTCTATTTTTTTCTTTCAATAGGGGGATTCCAGCAGAGGTTGCACCATTTGTTCGTAAGCATGGG AAAGCTCCATGGACCTTAATGGGCACATATGGAAAAAAGACTCTCAGATACTTGCACCTGAAAAACCCAAGAAAGTAGCA AAGTTTGGATCTGGCTGCAAACAATTCTGCAGAGAACTAATTAAAGCAAATCATTACTTGTGGTTCAGGTTCACAGGTTT AGATGTTTGAGAGGTGCAATTGGATATTTCTGGGTATTGCATGATGTTTTTGGGGGTGATTATGTAATCTTTAATACATT TTGGCTTTCTCTAAATCTTTTTTGTTGGAATATTATATGGTGTACTTCATATCGTGTCATGTTTAAATGTATGCTAAAAT TATCTGCTTCTCAAAAAATCAATTTAATACTTCTAGG
CDS sequence (LotjaGi5g1v0161900.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGTCTCCTTCTCCGTGCCTTTCGCCGCCACATCGTCCGGAACAGCGGCATGACCCGCGGCTTCACCGCCGCCGCCGC CGCCGGGAGCTTGGAATCAGAACCGAAGAAGGTGACATCTGGGGGGTTGTTGAAGACAACAACGACTGTGTCGGAGATGA ATCGGAAGGGTTTGGACCCTGCTCGTGAGTCTCTGATTCATTTGTTATGCTGCGACCAGTTGCAGAATGATAATGCTTAT AAGGTGTTGAGTGAAATGGTTAATAGTGGGTTTTTGCCCTCGGTTGCTACATACAACGTGCTTCTTCATGCATATTGCCG TGATAAGAGGGTTGATGAGGCCATGGGGATTTTGAGGGGCATGGCAGTGGAACCAAATGTGGTTTCTTTCAATACCGTTA TTGACGGGCTTTGCGCGAAAAGGAGGATCAAAGAGGCTGAGGAGCTGCTTCAGGAGATGAATTCCAAGGGTTTGGCCCCT GATTCTGTCACTTACAACACCTTGATCACTGCCATGAGTAAAAATACTAACCTTGTCATTCGTGCTATTGCGCTTTACGA TCAGATGAAACAACAACGCATCCCTGTTCCCTGGACCACTTACACGTCTCTCATTCATTTGCTCTGCACTTACAATGTAG ATAAGGCTTATAAGGTTTTCACTGAAATGATTGCTAGTGGCTTTGAGCCCTCGCTTGTTACATACAACGAGCTTATTCAT GCATATTGCTGTAGGGACAGGGTTCAGGATGCTATGGGGATTTTTAGGGGTATGCCTGACAGGGGTTTGACCCCTGATGC TGTTATTTGTAACACTCTAATTACTTTTTTTTGCAAATACGGGGAGCTGGAAAAGGCCTTTGAAATGAGGGCTGAGATGG TTGAGAGGGGCATCTTGCCTAATGCTGACACGTATTCAAAGCTTATAGATTGCCTGTGCCCACAGCGAAGACTGTCAGAA GCTTTTGATCTCTTCCGAGAAATGCTAGGTGGGGGGCTGTCGCCACGTGAATATGCTTATTTTAATTTGGTCGGTGCTTA TTGTCTTGTAGGTGAATTCAGTAAGGCTTTTCATTTGCGTGATGAAATGATACACAAGGGGTTTTTGCCTGATTTTGTTA CTGAGTTTTCACCATCTCTTGTTACATACAACGCCCTTATTTATGGGAATTGCTTGTTGGGAAGGGTTGAGGAGGCTCTG GGGATTTTGAGGGGCATGGCTGAGATGAGCTTGTCCCCTGATGATGTTAGTTATAACATTGTTATTTCCGGGTTTTGCAA ACTCGGGGAGTTGGGGAAGGCGTTTGAATTGATGGTGGAGATGGATGAAGCAGGGGGTATAAGGGGGGTGGATCTAGCCG TGTTTTCATCACTTATGAAAGGCCTGTCGGATGAGGTTAATTATAATAGTGTGATAAATGCTTATTGTGCTGAAGGTGAA GTGTCTAAGGCTCTAATATTGCATGATGAAATGGAACACCATGGTTCTTTGCGAGCTTCTGTTCTCTATATTATGCTTTT TGATGGATTTGATAAGAAAGCTAGGACAAGGGGAGCTAAGGAGTCCCTTCTGAGGATGTTTTATGATTTGTGTACGAGTC TGCCAACTTTCACATATGATACTCTGATAGAGAACTGCAGTAATAATGAATTTAAGAGTGTGGTAGAGCTTGCCAAAGGT TTCGGGATGAGGGGTTTAAAGAATGAAGCTGCCAGTGTTTTGAACACAGTGCTTCAATGGAATTATAAGCCAGATGGAGC AGTTTATAATTTTTTAATTGTTGAACATTGTAGGCGTCGTAATGTTGATAAGGCGTATAATATGTACATGGAGATGGTAC ATTATGGTTTTGCTTCTCATATGTTCTCTGTACTTGCTCTTATTAAAGCCCTATTTCATGTTGGAAGGCACAATGAGGTA AGGAGGGTCATTCAAAATGTATTGAGGAGTTGTAATATCAATGGTTTTGAGCTACATAAAGCACTTAGTGAAACTGGTGT CATCGTCAGGGAAGATAAAGTGAAAGATGTTCTTTTGAATGTGCTAGCTGAAATAGCGATGGATGGCCTGCTACTTAATG GTGGAAAGTGCTCATATGCTCCAGCAAACTCTGTTGCCATAAACTTTAAGTAG
Protein sequence (LotjaGi5g1v0161900.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSLLLRAFRRHIVRNSGMTRGFTAAAAAGSLESEPKKVTSGGLLKTTTTVSEMNRKGLDPARESLIHLLCCDQLQNDNAY KVLSEMVNSGFLPSVATYNVLLHAYCRDKRVDEAMGILRGMAVEPNVVSFNTVIDGLCAKRRIKEAEELLQEMNSKGLAP DSVTYNTLITAMSKNTNLVIRAIALYDQMKQQRIPVPWTTYTSLIHLLCTYNVDKAYKVFTEMIASGFEPSLVTYNELIH AYCCRDRVQDAMGIFRGMPDRGLTPDAVICNTLITFFCKYGELEKAFEMRAEMVERGILPNADTYSKLIDCLCPQRRLSE AFDLFREMLGGGLSPREYAYFNLVGAYCLVGEFSKAFHLRDEMIHKGFLPDFVTEFSPSLVTYNALIYGNCLLGRVEEAL GILRGMAEMSLSPDDVSYNIVISGFCKLGELGKAFELMVEMDEAGGIRGVDLAVFSSLMKGLSDEVNYNSVINAYCAEGE VSKALILHDEMEHHGSLRASVLYIMLFDGFDKKARTRGAKESLLRMFYDLCTSLPTFTYDTLIENCSNNEFKSVVELAKG FGMRGLKNEAASVLNTVLQWNYKPDGAVYNFLIVEHCRRRNVDKAYNMYMEMVHYGFASHMFSVLALIKALFHVGRHNEV RRVIQNVLRSCNINGFELHKALSETGVIVREDKVKDVLLNVLAEIAMDGLLLNGGKCSYAPANSVAINFK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_POSITIVE | 1 | 26 | 26 | - | – | |
| Phobius | 1 | 20 | 20 | - | – | |
| Phobius | 1 | 33 | 33 | - | – | |
| Phobius | 21 | 28 | 8 | - | – | |
| Phobius | 29 | 33 | 5 | - | – | |
| Phobius | 34 | 611 | 578 | - | – | |
| Gene3D | 40 | 178 | 139 | 3.7E-32 | ||
| ProSiteProfiles | 59 | 93 | 35 | 6.39 | ||
| PANTHER | 64 | 209 | 146 | 8.9E-114 | – | |
| Pfam | 90 | 121 | 32 | 1.0E-8 | ||
| ProSiteProfiles | 94 | 124 | 31 | 9.898 | ||
| TIGRFAM | 97 | 121 | 25 | 7.7E-6 | ||
| Pfam | 125 | 173 | 49 | 4.2E-17 | ||
| ProSiteProfiles | 126 | 160 | 35 | 13.066 | ||
| TIGRFAM | 128 | 162 | 35 | 1.4E-8 | ||
| Coils | 136 | 156 | 21 | - | – | |
| ProSiteProfiles | 161 | 196 | 36 | 9.942 | ||
| TIGRFAM | 163 | 195 | 33 | 0.0017 | ||
| SUPERFAMILY | 170 | 365 | 196 | 2.78E-7 | ||
| Gene3D | 179 | 316 | 138 | 5.6E-40 | ||
| ProSiteProfiles | 197 | 230 | 34 | 8.024 | ||
| PANTHER | 200 | 374 | 175 | 8.9E-114 | – | |
| TIGRFAM | 200 | 231 | 32 | 0.001 | ||
| Pfam | 227 | 258 | 32 | 1.1E-7 | ||
| ProSiteProfiles | 231 | 265 | 35 | 11.827 | ||
| TIGRFAM | 233 | 267 | 35 | 1.5E-7 | ||
| Pfam | 265 | 313 | 49 | 7.4E-15 | ||
| ProSiteProfiles | 266 | 300 | 35 | 12.025 | ||
| TIGRFAM | 268 | 302 | 35 | 9.0E-9 | ||
| ProSiteProfiles | 301 | 335 | 35 | 11.992 | ||
| TIGRFAM | 304 | 335 | 32 | 4.5E-6 | ||
| Gene3D | 317 | 446 | 130 | 1.8E-30 | ||
| ProSiteProfiles | 336 | 370 | 35 | 9.745 | ||
| Pfam | 343 | 368 | 26 | 0.038 | ||
| TIGRFAM | 343 | 371 | 29 | 2.6E-4 | ||
| PANTHER | 376 | 462 | 87 | 8.9E-114 | – | |
| Pfam | 378 | 427 | 50 | 3.0E-12 | ||
| ProSiteProfiles | 379 | 413 | 35 | 10.786 | ||
| TIGRFAM | 381 | 414 | 34 | 2.1E-5 | ||
| ProSiteProfiles | 414 | 448 | 35 | 10.786 | ||
| TIGRFAM | 416 | 445 | 30 | 2.5E-7 | ||
| Gene3D | 452 | 530 | 79 | 8.6E-8 | ||
| PANTHER | 463 | 663 | 201 | 8.9E-114 | – | |
| ProSiteProfiles | 464 | 498 | 35 | 11.038 | ||
| Pfam | 467 | 495 | 29 | 1.6E-6 | ||
| TIGRFAM | 468 | 495 | 28 | 8.8E-5 | ||
| Gene3D | 536 | 677 | 142 | 2.9E-11 | ||
| ProSiteProfiles | 550 | 584 | 35 | 5.47 | ||
| ProSiteProfiles | 585 | 619 | 35 | 9.514 | ||
| Pfam | 588 | 617 | 30 | 0.011 | ||
| TIGRFAM | 588 | 617 | 30 | 0.0016 | ||
| Phobius | 612 | 632 | 21 | - | – | |
| ProSiteProfiles | 620 | 650 | 31 | 5.36 | ||
| Phobius | 633 | 710 | 78 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi5g1v0161900.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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