Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0282500 |
| Transcript ID | LotjaGi5g1v0282500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Serine/threonine-protein kinase; TAIR: AT1G34300.1 lectin protein kinase family protein; Swiss-Prot: sp|Q9XID3|Y1343_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300; TrEMBL-Plants: tr|K7N421|K7N421_SOYBN Serine/threonine-protein kinase; Found in the gene: LotjaGi5g1v0282500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:59868427..59871503) extracted from Lotus japonicus Gifu genome v1.2.
ATCTAACAGTCATGTCACCTTAGTTAGTTAATCAAAACTGATGAAGAAATTAACTTGATTGACATATGCCACTATCAAGA ACTACAAAAAAAACACTTTCGCCATCTTTGTAGAAGGTCCCTCAGCTCACCATACAGCAATCCTCACGGGAAATGGCTGG TCCCTCCATGGAGACATTAATTTCACAGAGCTACCTTTACAAATCTCAATAATTTCAAGTTAATGGTTGGCTATCACCTA CACCACCAGTTTCCTGAAAATGACAATTCACAAGGATTCATGGAGTCATAGGAACAACACAATACCAAAAATATCGTACT GGATAATCCAAACATGTCAAAAGTTACATATTGGAAAACTGGAATATTCACAAAACCGTGTAGAATGTCTCATTGATCAA ACCGTGAACCACACTCCCACTTCAAAGAAGACATGTACCAAGAAACACAAGAACCTCCTCTGTTTTTGTATTTTTTCATC TTTTCCTCTGTAATCACCACCATTACAGGAACCACCACCATCTCACCAGGCACAGCAACCCTCTATGCTTCCAACACAAC CCAATCATGGTCCTCCCCCAACAAAACATTCTCCCTCCGCTTCATTCCCCTGCATCCACCACAATCTTCTTCCCCTGCTT CCTTCATAGCCGCAATTATCTACTCCGGCGGCTCACTCGCCATCTGGTCCGTCGGACACGGCGCCACCGTGGACTCCGGT GGATCCCTCCGGTTCCTTTCCGCCGGAAACCTCCGCCTCGTTAATGGGTCGGGGTCCATTGTGTGGGACTCTAGAACTTC AAACATGGGTGTCTCCTCTGCTATGCTTCATGACAATGGGAACTTGGTTCTCTCCAATGACACTGGCTCTGTGTGGTCAA GCTTTGACAACCCCATTGATACAATTGTGCCGTCTCAAAATTTCACCATTGGCATGGTTTTGCGTTCTGGGTTGTACTCC TTTTCTGTTCTTAGATATGGGAACCTCACCCTCAAATGGGATGATAGTGTGCCTTACTGGGAACAAGGTTTGGAGTTGAA TTCTTCCATGAGTAGAGTGAATTTTAGTTCACCTGTTTTGGGGTTGCAGTCAGTGGGAATATTGCAGCTTTCTGATCCAA ATTTGATTGCCCCAGTGCTGGTTGCTTACAGCAATGACTACAATGAAGGGAGTGATGTGTTTAGAGTTTTGAAGCTGGAT GGTGATGGGAATTTGAGGATTTATAGCTCTAAGAGGGGTAGTGGGATTGTGACAGTAAACTGGGTTGCTGTTGCAGATCA ATGTGAGGTTTTTGGTTACTGTGGAAATAATGCTATTTGTAGTTACAATGATTCCAACCCCATTTGTGGATGTCCATCTC AGAATTTTGTGATGGTTGATCCTAATGATAGTAGAAAAGGGTGTAAGAGGAAGGTGAGGCTTGAGGATTGTGCAGGGAAG GTGGCTATGTTGCAAGTGGACAATGCAAGATTCTTGACATATCCTCCTCAGTTTTTGATCAATCCTGAGATATTTTTCAT TGGTATATCAGCTTGCTGCGGAAATTGTCTTTCATCCAGTTCTTGTTTTGCTTCTACTTCCTTGTCAGATGGAACTGGAC TTTGTTACATAAAGACAGGTAATTTTCTTAGTGGTTATCAGAATCTTGCTCAACCTAGCACTTCGTATATCAAGGTTTGT GGACCATTGGTTCCAAACTCACCACCTAATTCCTTGGAGAATGCTAGAGGATGGAAGCATCAGAAGATACATTCTTGGAT ATTAGCTATAGTAATTTTGAGTACCTTTTTTGGTTTCCTTGCATTTGAGGTTGGTTTATGGTTGTGGTGTTGTAGAAATA GCTCAGGATTTGGAGGGTTTGCTGCTCAGTATCTTCTTCTTGAATATGCTTCTGGTGCACCAGTCCATTTCTCTTACAAG GAGCTCCACAAGTCAACAAAGGGGTTCAAGGAGAAACTTGGTGATGGGGGAGCAGGTTCTGTTTATAGAGGAGTTCTTGC AAATCAAACTGTTGTTGCAGTTAAGCAACTTGAGGAGGGCACTATTGAGCAGAGTGAGAAAGATTTCAGGATGGAAGTTT CTACCATAATTAGCACCCATCATATGAATCTAGTGAGGCTGATTGGTTTTTGCTCTGAAGGGCATCACAGGCTTTTAGTA TATGAGTTCATGAAAAATGGATCTCTTGATAACTTTCTTTTTGTTGATGAACAAGTGTTGAGTTGGGCGTATCGATTCAA CATTGCATTGGGTGCTGCTAGGGGCTTGACATATCTTCATGAGGAGTGTAGAAACTGCATTGTCCATTGTGATGTGAAAC CTGCAAACATTCTTTTAGATGAGAATTACAATGCAAAAGTCTCAGATTTCGGCCTCGCAAAGCTCTTAAGTCCAATGGAT CACAGACACCGAAACTTGACGAAAAGTGTGAGAGGAGCCAGAGGGTATTTAGCTCCTGAATGGCTTGCAAATCTTCCAGT AACTTTCAAATTTGATGTTTACAGTTATGGCATGGTTTTGTTGGAGATAGTGAGTGGTAGAAGGAACTTTGAAATCTCAG AAGAAACAAGTGGAAAAAGGTGTACCATCTGGGCTTATGAAGAGTTTGAGAAAGGTAACATCATGGGAGTAATTGATAGA AGATTGGTAAGCCAAGGAGTGAACTTGGAAGAAGCCAAAAGAGTGCTTCTGGCAAGTTTTTGGTGCATACAGGAGGAGCC ATCTGAGAGGCCTACAATGGGCAAAGTTGTGCAAATGCTAGAAGGTGTGATAGATATTGATAGGCCACCAGTTCCAAAAT CCATTATAGCAGGATTTTCTAATGGAATCAATGGGAGTGTCTCTGCTATATCCACTATTCCAACCTCATTAGGTCCAACT TCTTCCCCATCATCATCTTTGTTGGCTTCAGCTGGCTTCTTCTACAAGGGACCCTGAATGAACGTGACTTCAATCCTTTT TTATTTATTTATTTTAAGTTAATACACATTCACATCACAATGTTATTTTAGTTTAATATTTATTAATATGTGTAAAAAAT ATATCACATTAAGTTACAAATTTCAACTCAATTCACC
CDS sequence (LotjaGi5g1v0282500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTACCAAGAAACACAAGAACCTCCTCTGTTTTTGTATTTTTTCATCTTTTCCTCTGTAATCACCACCATTACAGGAAC CACCACCATCTCACCAGGCACAGCAACCCTCTATGCTTCCAACACAACCCAATCATGGTCCTCCCCCAACAAAACATTCT CCCTCCGCTTCATTCCCCTGCATCCACCACAATCTTCTTCCCCTGCTTCCTTCATAGCCGCAATTATCTACTCCGGCGGC TCACTCGCCATCTGGTCCGTCGGACACGGCGCCACCGTGGACTCCGGTGGATCCCTCCGGTTCCTTTCCGCCGGAAACCT CCGCCTCGTTAATGGGTCGGGGTCCATTGTGTGGGACTCTAGAACTTCAAACATGGGTGTCTCCTCTGCTATGCTTCATG ACAATGGGAACTTGGTTCTCTCCAATGACACTGGCTCTGTGTGGTCAAGCTTTGACAACCCCATTGATACAATTGTGCCG TCTCAAAATTTCACCATTGGCATGGTTTTGCGTTCTGGGTTGTACTCCTTTTCTGTTCTTAGATATGGGAACCTCACCCT CAAATGGGATGATAGTGTGCCTTACTGGGAACAAGGTTTGGAGTTGAATTCTTCCATGAGTAGAGTGAATTTTAGTTCAC CTGTTTTGGGGTTGCAGTCAGTGGGAATATTGCAGCTTTCTGATCCAAATTTGATTGCCCCAGTGCTGGTTGCTTACAGC AATGACTACAATGAAGGGAGTGATGTGTTTAGAGTTTTGAAGCTGGATGGTGATGGGAATTTGAGGATTTATAGCTCTAA GAGGGGTAGTGGGATTGTGACAGTAAACTGGGTTGCTGTTGCAGATCAATGTGAGGTTTTTGGTTACTGTGGAAATAATG CTATTTGTAGTTACAATGATTCCAACCCCATTTGTGGATGTCCATCTCAGAATTTTGTGATGGTTGATCCTAATGATAGT AGAAAAGGGTGTAAGAGGAAGGTGAGGCTTGAGGATTGTGCAGGGAAGGTGGCTATGTTGCAAGTGGACAATGCAAGATT CTTGACATATCCTCCTCAGTTTTTGATCAATCCTGAGATATTTTTCATTGGTATATCAGCTTGCTGCGGAAATTGTCTTT CATCCAGTTCTTGTTTTGCTTCTACTTCCTTGTCAGATGGAACTGGACTTTGTTACATAAAGACAGGTAATTTTCTTAGT GGTTATCAGAATCTTGCTCAACCTAGCACTTCGTATATCAAGGTTTGTGGACCATTGGTTCCAAACTCACCACCTAATTC CTTGGAGAATGCTAGAGGATGGAAGCATCAGAAGATACATTCTTGGATATTAGCTATAGTAATTTTGAGTACCTTTTTTG GTTTCCTTGCATTTGAGGTTGGTTTATGGTTGTGGTGTTGTAGAAATAGCTCAGGATTTGGAGGGTTTGCTGCTCAGTAT CTTCTTCTTGAATATGCTTCTGGTGCACCAGTCCATTTCTCTTACAAGGAGCTCCACAAGTCAACAAAGGGGTTCAAGGA GAAACTTGGTGATGGGGGAGCAGGTTCTGTTTATAGAGGAGTTCTTGCAAATCAAACTGTTGTTGCAGTTAAGCAACTTG AGGAGGGCACTATTGAGCAGAGTGAGAAAGATTTCAGGATGGAAGTTTCTACCATAATTAGCACCCATCATATGAATCTA GTGAGGCTGATTGGTTTTTGCTCTGAAGGGCATCACAGGCTTTTAGTATATGAGTTCATGAAAAATGGATCTCTTGATAA CTTTCTTTTTGTTGATGAACAAGTGTTGAGTTGGGCGTATCGATTCAACATTGCATTGGGTGCTGCTAGGGGCTTGACAT ATCTTCATGAGGAGTGTAGAAACTGCATTGTCCATTGTGATGTGAAACCTGCAAACATTCTTTTAGATGAGAATTACAAT GCAAAAGTCTCAGATTTCGGCCTCGCAAAGCTCTTAAGTCCAATGGATCACAGACACCGAAACTTGACGAAAAGTGTGAG AGGAGCCAGAGGGTATTTAGCTCCTGAATGGCTTGCAAATCTTCCAGTAACTTTCAAATTTGATGTTTACAGTTATGGCA TGGTTTTGTTGGAGATAGTGAGTGGTAGAAGGAACTTTGAAATCTCAGAAGAAACAAGTGGAAAAAGGTGTACCATCTGG GCTTATGAAGAGTTTGAGAAAGGTAACATCATGGGAGTAATTGATAGAAGATTGGTAAGCCAAGGAGTGAACTTGGAAGA AGCCAAAAGAGTGCTTCTGGCAAGTTTTTGGTGCATACAGGAGGAGCCATCTGAGAGGCCTACAATGGGCAAAGTTGTGC AAATGCTAGAAGGTGTGATAGATATTGATAGGCCACCAGTTCCAAAATCCATTATAGCAGGATTTTCTAATGGAATCAAT GGGAGTGTCTCTGCTATATCCACTATTCCAACCTCATTAGGTCCAACTTCTTCCCCATCATCATCTTTGTTGGCTTCAGC TGGCTTCTTCTACAAGGGACCCTGA
Protein sequence (LotjaGi5g1v0282500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MYQETQEPPLFLYFFIFSSVITTITGTTTISPGTATLYASNTTQSWSSPNKTFSLRFIPLHPPQSSSPASFIAAIIYSGG SLAIWSVGHGATVDSGGSLRFLSAGNLRLVNGSGSIVWDSRTSNMGVSSAMLHDNGNLVLSNDTGSVWSSFDNPIDTIVP SQNFTIGMVLRSGLYSFSVLRYGNLTLKWDDSVPYWEQGLELNSSMSRVNFSSPVLGLQSVGILQLSDPNLIAPVLVAYS NDYNEGSDVFRVLKLDGDGNLRIYSSKRGSGIVTVNWVAVADQCEVFGYCGNNAICSYNDSNPICGCPSQNFVMVDPNDS RKGCKRKVRLEDCAGKVAMLQVDNARFLTYPPQFLINPEIFFIGISACCGNCLSSSSCFASTSLSDGTGLCYIKTGNFLS GYQNLAQPSTSYIKVCGPLVPNSPPNSLENARGWKHQKIHSWILAIVILSTFFGFLAFEVGLWLWCCRNSSGFGGFAAQY LLLEYASGAPVHFSYKELHKSTKGFKEKLGDGGAGSVYRGVLANQTVVAVKQLEEGTIEQSEKDFRMEVSTIISTHHMNL VRLIGFCSEGHHRLLVYEFMKNGSLDNFLFVDEQVLSWAYRFNIALGAARGLTYLHEECRNCIVHCDVKPANILLDENYN AKVSDFGLAKLLSPMDHRHRNLTKSVRGARGYLAPEWLANLPVTFKFDVYSYGMVLLEIVSGRRNFEISEETSGKRCTIW AYEEFEKGNIMGVIDRRLVSQGVNLEEAKRVLLASFWCIQEEPSERPTMGKVVQMLEGVIDIDRPPVPKSIIAGFSNGIN GSVSAISTIPTSLGPTSSPSSSLLASAGFFYKGP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 11 | 11 | - | – | |
| PIRSF | 6 | 813 | 808 | 1.7E-203 | ||
| TMHMM | 9 | 31 | 23 | - | – | |
| Phobius | 12 | 39 | 28 | - | – | |
| ProSiteProfiles | 21 | 153 | 133 | 11.226 | ||
| SMART | 37 | 154 | 118 | 1.5E-8 | ||
| Phobius | 40 | 441 | 402 | - | – | |
| TMHMM | 69 | 91 | 23 | - | – | |
| Gene3D | 71 | 152 | 82 | 4.9E-10 | ||
| CDD | 75 | 154 | 80 | 4.41506E-16 | ||
| SUPERFAMILY | 84 | 199 | 116 | 1.44E-19 | ||
| Pfam | 94 | 166 | 73 | 2.6E-13 | ||
| Gene3D | 155 | 272 | 118 | 9.9E-8 | ||
| Pfam | 246 | 308 | 63 | 2.6E-5 | ||
| PANTHER | 366 | 794 | 429 | 5.8E-125 | – | |
| PANTHER | 366 | 794 | 429 | 5.8E-125 | – | |
| Phobius | 442 | 465 | 24 | - | – | |
| TMHMM | 442 | 464 | 23 | - | – | |
| Phobius | 466 | 834 | 369 | - | – | |
| Gene3D | 482 | 579 | 98 | 5.2E-29 | – | |
| SUPERFAMILY | 486 | 777 | 292 | 1.48E-75 | ||
| ProSiteProfiles | 503 | 780 | 278 | 34.789 | ||
| SMART | 503 | 780 | 278 | 2.2E-27 | ||
| Pfam | 506 | 774 | 269 | 2.0E-49 | ||
| CDD | 509 | 778 | 270 | 1.70454E-94 | – | |
| Gene3D | 580 | 784 | 205 | 4.1E-59 | – | |
| ProSitePatterns | 623 | 635 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Protein serine/threonine kinase activity | Catalysis of the reactions: ATP + protein serine = ADP + protein serine phosphate, and ATP + protein threonine = ADP + protein threonine phosphate. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. | ||
| Biological process | Recognition of pollen | The process, involving the sharing and interaction of the single locus incompatibility haplotypes, involved in the recognition or rejection of the self pollen by cells in the stigma. This process ensures out-breeding in certain plant species. |
Expression pattern of LotjaGi5g1v0282500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…