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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0301900 |
| Transcript ID | LotjaGi5g1v0301900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | DNA mismatch repair protein mutS; TAIR: AT4G25540.1 homolog of DNA mismatch repair protein MSH3; Swiss-Prot: sp|O65607|MSH3_ARATH DNA mismatch repair protein MSH3; TrEMBL-Plants: tr|A0A072VPI7|A0A072VPI7_MEDTR DNA mismatch repair MSH3-like protein; Found in the gene: LotjaGi5g1v0301900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:61884587..61893995) extracted from Lotus japonicus Gifu genome v1.2.
CCTTCATAGAGCATAAGAATTAAAGGGGGAAAACAAAAAAAAAAAGTCCAAAAGTTCCAACATTTTCCCGAGAAAACCCA AAGCGCGCCAAATCCACGTAAATCGGCAAACCCACCACCGCCGGAACCCCGGTACCACGGTGGCGCCACCACCACAAACA TGGGAAAGCAAAAGCAGCAAGTCATCTCTCGCTTCTTCGCCCCCAAATCCAAACCTCCTTCATCCACCACCGATTCCCCT TCTCCTCCTCCGTCCTCTCCTCGTCCAAACCCTCCCACTCCAAAAATCTCAGCCACCGTCACTTTCTCTCCGGCGAAACG CCGCCTTACCTCTCAGCTAACATCCCCCCACAAGTCCCCCAAACTCCCCAAACTCTCCCCTCACACCCACAACCACAGCC CCTCACTCCACCAACGCTTCCTCCAGAAGCTTCTGGAACCTTCCTCACACCCTTCTACTTCTGACCCACAACCCCATTCG TCTTTCAAATCAGTGAAGTACACTCCGTTGGAGCAACAGGTGGTGGAGCTCAAAGCCAAACACCCTGATGTTCTTTTGAT GGTTGAAGTTGGTTATAAGTACCGGTTCTTCGGCGAAGATGCTGAGAATGCTGCTAGAGTTTTGGGTATATATGCTCACA TGGATCATAATTTCTTGACTGCGAGCATACCAACTTTTCGATTGAATGTCCATGTGAGGAGGCTTGTGAGTGCAGGGTAC AAGGTTGGTGTGGTTAAGCAGACTGAGACTGCAGCTATTAAGGCTCATGGGTTGAACAAGTCCGGCCCGTTTTGTCGAGG CTTGTCGGCATTGTACACCAAGGCCACGCTGGAGGCGGCAAAGGATTTGGGGGGTGATGAAGAGGGGTGTGGGGCAGTGA GTAACTACTTGCTGTGTGTTGTGGAGAAGAGCATTTTAGGAGAGAGGTCTAATTGTGGGGTGGAGGGTGGTTTTGATGTT AGGGTTGGAATTGTTGCTGTGGAGATATCAACTGGGGATGTTGTTTATGGAGAGTTTAATGACAATTTTATGAGGAGTGA GCTTGAGGCTGTGCTTGTGAGCTTGTCTCCGGCTGAGTTGCTTCTTGGTGACCCTCTTTCCAGACAAACTGAGAAGGTAG TTTTTATCTACCAGTTTGTTGCTTGCCTCACAAGTAATGAACATTCTCCTTGTTTCCTCTTTGTTTTGAGAATTGTAATA TTGTTTCTTTATGTTCTTAATGGAGCTTCTAGTTGCTGTACTTTAGTTTAAATGATTTTGATTGATGGAATGATGATAAA TGTATTATACATGTACCTTATAAGATTGAGTTTAAAGTCCAGGTTTCCAGGTAACTTCTTTCTTGGCCTGACTTCAGGGC ATGCTTGTTGGAAGTGAGACAATTTAGAGGATGATGTTAAAATATACTTTTTGTTAACGTTGCTTCTTGGTTGAGGATAT TTAAAATTGGAATAGTTCAAATCACAGAATTTGTATATTTTTTTCAATAAATGCTTTTAAGTTGATGACATAAGGAAAAT ATTCATAACCATGGATGTTTATTATAAAGGGGATCCATAAATAAAACATTATAATTATCATATTTAAATTTTAAGTTTCA ACTGCTAAGTGCTAACTTGGAAGATGATGATACAACACAAATCCCTTATCTTATTTCAGGTAGTTAATGTGAAAATCTGA TTTAGATTCTTGATTGAATATGATATATGGTATTTCGAATTAGCTGAACTGAGGACTAAAGTTGCTATAATGATTTAAAC TGAATGACTAATCAATAAAATTTAGTGCATGGTTATTCCCGATATGGTAGGTATGAATTAATCCTGACTTTGACTTAACA ATATACTCCCCCTCTAGTAGAAGCTTCACTGAGTAGTACGGGGTTACTAGGAATGAACCAAGCATTAACCACTGTCAAAC TAAATACCCAGCCCTATAGAACCATCAGCTCTTATAACCACTGTTTAAGTATGACGAGGAGCCCAAGAAGAGGGGGAACT CTACTAATAGATGAGAATAATGTTCCGAGACTACATCTGACCCAAAACATAAGGCAATGAATCATTGAGTCTTCATAATC ACATTTATATTGTCATTAACTAGCCCATTCTTAACCAATGTGGGACTTAATCACTCACGTTTGGAATTTCCTAACATTGA AAGCTTATATTTGCATTTGTAAGATAGTTTCTGTTCTAAATAATTAATATTGTTGGAGGAAATTTTTATGCTCATGTTAA ACCACGTAATCCCATTAAGGAGGCATGCTATCATAAATACTAGATGATTTATTTATAGCACTTAGAAGAAGCTCTGAGTT GATTGATATCAACTCACTAACCCAAAGATCCAATGATATGATTCGGTGACCTATTTTCAGTTATTACTGGATTTTGCTGG ACCTGCCTCAAATGTTCGTGTGGAACGTGCCTCACGAGATTGCTTCACTGGTGGAGGTGCTCTTGCTGAAGTTCTGACCT TGTATGAGAACATGTGTGTCGACAGCCCATCGCATTCAATGCAAAGCAATGATTTGAATGAGCAAAGCAATCAGCAGTTG GTAGTCAAGGTACCAACTACTAATATTGATAAAACCTGTCATCCTTGCAATAAGCTTTGGGAAGTCTTAAAAAGTTAAAA TCATAATTTCTTGTTAGTTTGACTCATGAGTATGTACTGTTCTTCTAGTCAAACCATCTTGTAATTATTGACCATGTCTT TGGAATTTGTTATCACAGTGGATTGTTGTTTATGATAAATATAATCACTTACTAAATGTTTAAATACTTCTGATTATACA GGAGGTAATGAACATGCCAGATTTGGCTGTCCAAGCATTGGCTTTAACTGCTCACCATTTGAAGGGATTCAGTTTTGAAA GAATTCTATGTTCAGGCGCTTCTTTAAGGCCCTTCGTAACCAAAACGGAAATGATCCTCTCGGCCAATGCACTACAACAA CTAGAGGTAATTGTATATTATACTTTTTGTTTCTTGAGAGGGATTAGTAAGCACGAGCCTATTTTATATTTCTATGCTTG ATGTTTCAATTTTTTCTATTTCTTTGTGAGTATGAAGATTAGAAACTGTGTATCTGCAGTGGATGATAATGGTCCGCAGA AATAAGTTTGTGATGAAAATAAACTGGAAAGAAATTTTGTCCAAAGGTTATCAGCAAAGCAGTCTTTGTAAGTAACTAAG ATAAGCTGAAATGTTCGGTGAAATTGCTCCATTGTGTCAGAGTCATAATAAGTATCTCCAATAATTACTAATCTTGTAGA ATATTTAAGTCTTTAACTAATGTCTAGCCTTTCCCTTTTGGTACTGTTGTGGAATATGGATAAATTGCACCGTTAATCAA TCTAATCAGACGCTTAAACGACCCTTTTTTTCTTTGGATCAGGTATTAGTTCTTCTTGTAGATTCATTTATATGTAATCA AGTATCGTAATAAGGTATCATGGCTTCTTGCTGGCTAGTGACAACAGCAGGTATAAGTTACCCAGTTTTTTTTTTGGGGG GGGTTCTGGTATTAGTTCTTGTATACTGATGTGAAATTAATTATATTAATAATATATCTTGGCTTCTTGCTAGCCAGTGA CCACAGCATGTATAGCTAGCTGTTTTCTTTAACAAGGGGTCACAAGATCATGATGGTTGCTTACTATTCTTTTACAACTT ATGATGAAATTTATTTTCTACTTGTGTTCTTGAATAAGCTAGTACTGCTTGGTTTTCTCCTCATGCCAGCTTAAAATTCC CTGATAGATTCTTGCTGCTATTAAATGTTTAATCTTTTTGCAGGTTTTACAAAATAAAATTGATGGATCTGAGAGTGGTT CCTTGCTGCAAATTATGAATCATACTCTTACTATATTTGGTTCCAGGCTTCTTAGGCATTGGGTATGAGGTGCTTCCGTT CCTGATATACGATCATTAAGTGTTAAATTCTCAATTGTCTTGTTTTACCGGCCAAAAAGTATTTTCTTTTTAATTGCTGC TCTTGTATATAATACAGGTATCTCACCCATTATGTGATCAAACCTTGATATCTGCTCGTCTTGATGCTGTATGTGAAATA GCAGAGTCCATGGGATCTTTTAAGGGCAAGAAGCTTGGATGTTTTGAGGAAGAGCCTGATGTATCAATTGTGCAGCCTGA GTTGGCATATGTACTTTCACTGGTTTTGACAGCTCTGAGCCGAGCACCTGATATACAGCGTGGGATTACAAGAATTTTTC ACTGCACTGCTACTCCATCTGAGGTGATAGATAGCTTCTGTTAGCCTGTTCATGTATTTCATATATTCTGTAATTTAGTA AATTGTTTTCATCTTCCTTGTCATTTCTTTTAACATTTGAGCTTTACATGGGAGAGGGAGACAAAAAGAGAGCTGAACAT ACTATGTTGATTACTTAATGCAAGATTCTCTGCTTGGGCATAGTAAGATTTGAGCCACCTGATGTGAGTGTTTGGTCCAT ATTCAATTTGAGATTAATAAGCATGCCAAGACTTTCTTAGTGATTCTACAGTACATAGTTTGATGCATTAAGTGGGAACA GTCAAGAGCTAAAGCATGATCCAGAACTCCTTCAAGTTGTAGAAGTGTGTTTGCAAGTGCAACAGGAGTGTGGCATAGAT GAGGCCTAGAAGCCTTATATACGAGTGTTTCTGTAATCTTGACCCAGATATAAGGAATATATCATTAGGAGTTTGCCAGT TTTCAGCACAAACTCTATCTAAATAGGACTGTTTTTTAGCCATTTGTAATTTGTTTTTTCTGAATTAGTAAAGTGAATAA CTTAAAAAACAATTTGGTGAAAATATACTTACTGCTATTTCTGAACAGCTATAGGAACTCAGATTCTTCAAATATCATAT TTTATGGGTGTAAATATACTCTGAAGGTTGAGATTTGAGAAATGCTAGCAACGCTGGTTGAAATCCATGTAGGTCAATCC TATCACATTTGGAGTATGATCCATCGAATAAAGAATGGGAATCATGTTATTTGGTGGATCCCTCATTCATTTCAACCTAT AGGAGAGTGTCTAGGAAAAGGTTTTTCAGATAGTATGTTGCTAAAAGATTTTTAATTGTCTACAAAGCTACTAGCTATTG ATTGCTTGAAATATGTTGTATTTTTACAGTTCATTGCCGTTGTTCAAGCTATTTTGTCTGCTGGGAAGCGGCTTCAGCAA CTTAAAATAGGGGAGGAGGATAATAATAAATTATGCTCTCATCTGTTAAAGAAGTTAATTTTAACTGCTTCATCTGCCAG TGTCATTGGTAATGCTGCAAAATTGTTGTCATCCTTAGACAAAGACTCTGCCGATCAAGGAGATATACCAAATCTGATCA TTGCATCTGAAGGACGATTTCCCGAGGTTTGTCTATATCTTCTCTGTGTAAAAACTTACACATTACATTTTCCTTCTTTC TGGGTTCATTCTTCACTAGTGCTTTAATCCTGAACTTTTCTTACAATATTAAAATGAACAGGTCATTAGAGCTAGGAAGG ATTTTCAAATGGCAGTGGAACAATTAGATTCATTGATTAGCTTGTACCGTAAACGGCTTGGAATACGAAATTTGGAATTC TTGAGTGTTTCTGGAGCAACACATTTGATAGAGGTAGCTTGATTGAAACATGGAAACCTTTTAATACTTCAACTTTGCAG GCGCTGGGAATATGGTTGCAAATTGCTATTTAGTATTACAGTTCTTGTTACTTCTTTGCTCACTATTTGGTTGTTGCATG GCATTTCATTTTCTTATTTGATCTGAAACATCTGTTCATATTGCATGCATGTTGTATGATACATGTAATGCTCCAAGTTT TGTCTTAACTCATAAATTGATAGACTGATGAGTGATTTGAAGGAAAATTATGGTGATGTTTTCCCCCTTTCTCTACCTGC ACCCCATAAAAATGGAATTAGGATGGATGGAAAATATTTATTGTCTGCTGCCAATATCCATTTGTTTTAGGTTGTTTGAC TGTTTCTGACCATTGAGTTGGTATTATTAAGTTTCTCAATTTTAATTTTCGTTCAACCATAAACTTAAAAAGTAATTCTA TTTTATCTTTTTCTTGTTGTTGATCAGCCTGGAACTCTGATTCAACAATTGAGTTCAAAACTCTTAAATGTTTCCATAGA GTTAATGCTTGGTTGTGACATGTGACTAAGTTATAATTGCTATTCAATTTATTTTTGCTGTAGTTATCAACAGATGTAAG AGTGCCTTCAAACTGGGTTAAGGTGAATAGCACAAAGAAAACAATTCGGTATCACCCTCCTGAAGTAGTGACAGCATTAG ATGGCTTATCATTAGCGAAAGAGGAGCTTACTATTGCCTGCCGAGCTGCATGGGATAGCTTTCTGAGGGACTTCAGTAAA CACTATGCTGAGTTTCAAGCTGCTGTTCAAGCACTTGCTGCTTTAGATTGTCTGCATTCACTTGCCATTCTTTCAAGAAA TAAGGTTTGTTCTTCAAGAACTTTTCATGTGCTCCCTAATATTTGTTGCATTTTGTAAAATAGTTTTCTACTTTCTGTGG CAGAGTTATGCTCGCCCAGTGTTTGTAGATGATTATGAACCTGTTCAGATACAAATTTGTTCTGGCAGACATCCGGTATG AATTTTATGGTTTGTAATTGCATAAAAAATTCACATTAATGTTTGCTTGAGAGTTCTCTATTCTATGTCATCATTTGTGT TTAATGTATTTAGTACTTATCATGATGTGTATACTTCCTGTCAATTGGTCGTTAGCTCTTTTAAGGTTTCTTGGAGGCCT GAGAGTACTGGCTTGATAAACAAAAGATTTCTGTTTGGTAGTTGTTGATGTAATTGAAATGAGTTTTTCAACCTTATTAT GTGTTCACATAACCCTTCATTATGCATCGTATATTATATATTCAATACCAGTTAACCAGAACCAGGGTACTCTATCCTCA AAACTATCAGGGTTACAGTGATTAACTCCAACCGTGTTTATTCAAGTTCCTTTGATAGGAACAAACACTAGAAAAGAAAT AAATAACTGTTTATTGGAGAAAAACTGATAAAACTCCTGATTATTTAAGAGATTCAGGTCTCTCCTAAGGGCCCAATTAC AAATTATCTCTCTAACTCTCACTTATTTATAACATTCCCTCTCACTCTAACTAACTCTCAAACTAACTAAAAACTACCTG ATTCCTGAACTAACTAACCAGACTATAATCAACAATGGTTACCTATCATCCTTATTGTTGATTGGTAACCAGATGCTCAT TACTGTTAGCCATTTCCCATCAGGTTTTGGAGACTACCTTACAAGACAATTTTGTCCCAAATGATACAAACATGCACGCA GACAGAGAGTACTGTCAGATTGTCACTGGACCCAATATGGGAGGAAAAAGTTGCTATGTTCGCCAGGTGGCTCTGATTGC TGTAATGGCTCAGGTACAGTCCATGCAATGTATGTTATAATTATGCTTTGAAGTTGTGCACCAGGGCATATGCTTTGCTT TGTAAACATCATAGGGAAATTTTCCTTTCTGGGAAACGTTCTTATGTATCAAAAGTTTTGAAATTGAGCTAGCTTTTTCT TTCAAGTTATTTTCTTTATTAAGTTTATGATCTATTTCCACCTCCAAAATATATAATCCTAGTGTTTTTTTTGACAACTG TGTCCCTTACTGCTGTTTCTTTATTGAAACATGCCCTGATCTCTCTAGGTTGGTTCCTTTGTACCAGCATCATCAGCAAA ACTGCATGTCCTGGATGGGATCTACACCCGGATGGGTGCTTCTGACAGTATTCAGCAAGGTAGAAGCACTTTCCTAGAAG AACTAAGTGAGACTTCACATATACTGCATAGCTGCACAGAACGTTCACTAGTTATAATTGACGAACTTGGGAGAGGTACA AGTACACATGACGGCATGGCCATTGCTTATGCGACATTGCATTATCTTCTGAAGCAGAAAAAAAGCATGGCCCTCTTTGT CACTCACTATCCAAAGATTGCCAGTCTGGTTGCTGAATTCCCAGGCTCTGTGGCAGCATATCATGTATCACATCTGACCT CACATGATAATGCTAGTAAAAACTCCAACTTGGATCGTGAAGATATCACTTATCTGTACAAGCTCGTACCTGGTGTTTCA GAGAGGAGTTTTGGGTTTAAGGTTGCGCAGCTCGCGCAGGTAAATTCACGCATTATATATTACTTTGGATGCTCAGAAAT ATGCTTCACAAATGTAAACCTTCCTCTAGTATAGTTCATTCATTGCAAACTAACATTTTGACTCAGAAACTCAGGGGTTG CCTTGGTATCTGAGTTTGACCACCGTATGATTTAGTTTTTGAATTTTATAAGATATTGAAACACATTTAAGACAATTGTA AACATCATGCTTTTCAGTTACCACCACTTTGCATTAGTCGAGCCATTGCCATGGCTTTCAAATTAGAAGCACTAGTAAAC AGTAGAGTACATAGTAGATCGAGAAAGGAGCTGCTCTTGGATGCACCCATGATTGATCAAGAGCAAGAATCGCGTGAGCT TATGGTCCAACCAAACGATTGTGCCCTTCAAGACTTTGGTAGAGCTTACAAGGAATTCTCTTCAAACTTAAAATCTGCAA TACTAGATGATGACCTTGCAAAAAGCTTTCAGCTTTTGGAGAATGCTAGAAGCATTGCAAAGACATTAATTGGCAGGTAA AGTACCTCTTTTCCCTTTTTTCTTTCCATATAATATAACCGATGTTGTTAACAAAGTTTGTATTTGAGCTCCCTTCATCT TTCTAATATACAAGTACTTATCCTCTTAATGAAATGAGGGCCTTGCATGGTGATAAGATTATCAGTTTACACCTTTGACT CATTTTTTACTTGTGAGATTATCATCAACATGATGTATATTTACCAACAGAACTTTTGTATCATCTTTCATTGAGGGTGT AACAAAGTAGCTTTGTTAATTATGTTTAGAGTGATTGACTAGCTGATTTTATTGTGGTTGCTGATAGTTGCTTCAAAATT TTCATCACAACTCTAAATTGATTTTTTAATGTGCTTTAACAGATCAGTGCAGTCTGTATAAGTGAGACATGACATGCAGA TGCAGGGTTCAGAAGTCCTTTGCCGTGTTGTAAAATGCAGATAATATATTTTTAATAATTTTTTTGTATATCAGTTCAAA GTTAGGCCTTCCAATTTTGTTCTTCTACGTCCTCATGCATTAATGATGCCCTGATTGGGCTGGAAGTAGGGAGGTAAGTG GAGAATTTAACTTTTATGATTTGCATAAATTTGTATATAAATGTTCTGGATATTGGATAATGCTCCAGTGCAAAGCAGTA GCTTTTTTTCTTTTGGTCAATGGTGTATATGGAACTATGGAAGTTTTTT
CDS sequence (LotjaGi5g1v0301900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGAAAGCAAAAGCAGCAAGTCATCTCTCGCTTCTTCGCCCCCAAATCCAAACCTCCTTCATCCACCACCGATTCCCC TTCTCCTCCTCCGTCCTCTCCTCGTCCAAACCCTCCCACTCCAAAAATCTCAGCCACCGTCACTTTCTCTCCGGCGAAAC GCCGCCTTACCTCTCAGCTAACATCCCCCCACAAGTCCCCCAAACTCCCCAAACTCTCCCCTCACACCCACAACCACAGC CCCTCACTCCACCAACGCTTCCTCCAGAAGCTTCTGGAACCTTCCTCACACCCTTCTACTTCTGACCCACAACCCCATTC GTCTTTCAAATCAGTGAAGTACACTCCGTTGGAGCAACAGGTGGTGGAGCTCAAAGCCAAACACCCTGATGTTCTTTTGA TGGTTGAAGTTGGTTATAAGTACCGGTTCTTCGGCGAAGATGCTGAGAATGCTGCTAGAGTTTTGGGTATATATGCTCAC ATGGATCATAATTTCTTGACTGCGAGCATACCAACTTTTCGATTGAATGTCCATGTGAGGAGGCTTGTGAGTGCAGGGTA CAAGGTTGGTGTGGTTAAGCAGACTGAGACTGCAGCTATTAAGGCTCATGGGTTGAACAAGTCCGGCCCGTTTTGTCGAG GCTTGTCGGCATTGTACACCAAGGCCACGCTGGAGGCGGCAAAGGATTTGGGGGGTGATGAAGAGGGGTGTGGGGCAGTG AGTAACTACTTGCTGTGTGTTGTGGAGAAGAGCATTTTAGGAGAGAGGTCTAATTGTGGGGTGGAGGGTGGTTTTGATGT TAGGGTTGGAATTGTTGCTGTGGAGATATCAACTGGGGATGTTGTTTATGGAGAGTTTAATGACAATTTTATGAGGAGTG AGCTTGAGGCTGTGCTTGTGAGCTTGTCTCCGGCTGAGTTGCTTCTTGGTGACCCTCTTTCCAGACAAACTGAGAAGTTA TTACTGGATTTTGCTGGACCTGCCTCAAATGTTCGTGTGGAACGTGCCTCACGAGATTGCTTCACTGGTGGAGGTGCTCT TGCTGAAGTTCTGACCTTGTATGAGAACATGTGTGTCGACAGCCCATCGCATTCAATGCAAAGCAATGATTTGAATGAGC AAAGCAATCAGCAGTTGGTAGTCAAGGAGGTAATGAACATGCCAGATTTGGCTGTCCAAGCATTGGCTTTAACTGCTCAC CATTTGAAGGGATTCAGTTTTGAAAGAATTCTATGTTCAGGCGCTTCTTTAAGGCCCTTCGTAACCAAAACGGAAATGAT CCTCTCGGCCAATGCACTACAACAACTAGAGGTTTTACAAAATAAAATTGATGGATCTGAGAGTGGTTCCTTGCTGCAAA TTATGAATCATACTCTTACTATATTTGGTTCCAGGCTTCTTAGGCATTGGGTATCTCACCCATTATGTGATCAAACCTTG ATATCTGCTCGTCTTGATGCTGTATGTGAAATAGCAGAGTCCATGGGATCTTTTAAGGGCAAGAAGCTTGGATGTTTTGA GGAAGAGCCTGATGTATCAATTGTGCAGCCTGAGTTGGCATATGTACTTTCACTGGTTTTGACAGCTCTGAGCCGAGCAC CTGATATACAGCGTGGGATTACAAGAATTTTTCACTGCACTGCTACTCCATCTGAGTTCATTGCCGTTGTTCAAGCTATT TTGTCTGCTGGGAAGCGGCTTCAGCAACTTAAAATAGGGGAGGAGGATAATAATAAATTATGCTCTCATCTGTTAAAGAA GTTAATTTTAACTGCTTCATCTGCCAGTGTCATTGGTAATGCTGCAAAATTGTTGTCATCCTTAGACAAAGACTCTGCCG ATCAAGGAGATATACCAAATCTGATCATTGCATCTGAAGGACGATTTCCCGAGGTCATTAGAGCTAGGAAGGATTTTCAA ATGGCAGTGGAACAATTAGATTCATTGATTAGCTTGTACCGTAAACGGCTTGGAATACGAAATTTGGAATTCTTGAGTGT TTCTGGAGCAACACATTTGATAGAGTTATCAACAGATGTAAGAGTGCCTTCAAACTGGGTTAAGGTGAATAGCACAAAGA AAACAATTCGGTATCACCCTCCTGAAGTAGTGACAGCATTAGATGGCTTATCATTAGCGAAAGAGGAGCTTACTATTGCC TGCCGAGCTGCATGGGATAGCTTTCTGAGGGACTTCAGTAAACACTATGCTGAGTTTCAAGCTGCTGTTCAAGCACTTGC TGCTTTAGATTGTCTGCATTCACTTGCCATTCTTTCAAGAAATAAGAGTTATGCTCGCCCAGTGTTTGTAGATGATTATG AACCTGTTCAGATACAAATTTGTTCTGGCAGACATCCGGTTTTGGAGACTACCTTACAAGACAATTTTGTCCCAAATGAT ACAAACATGCACGCAGACAGAGAGTACTGTCAGATTGTCACTGGACCCAATATGGGAGGAAAAAGTTGCTATGTTCGCCA GGTGGCTCTGATTGCTGTAATGGCTCAGGTTGGTTCCTTTGTACCAGCATCATCAGCAAAACTGCATGTCCTGGATGGGA TCTACACCCGGATGGGTGCTTCTGACAGTATTCAGCAAGGTAGAAGCACTTTCCTAGAAGAACTAAGTGAGACTTCACAT ATACTGCATAGCTGCACAGAACGTTCACTAGTTATAATTGACGAACTTGGGAGAGGTACAAGTACACATGACGGCATGGC CATTGCTTATGCGACATTGCATTATCTTCTGAAGCAGAAAAAAAGCATGGCCCTCTTTGTCACTCACTATCCAAAGATTG CCAGTCTGGTTGCTGAATTCCCAGGCTCTGTGGCAGCATATCATGTATCACATCTGACCTCACATGATAATGCTAGTAAA AACTCCAACTTGGATCGTGAAGATATCACTTATCTGTACAAGCTCGTACCTGGTGTTTCAGAGAGGAGTTTTGGGTTTAA GGTTGCGCAGCTCGCGCAGTTACCACCACTTTGCATTAGTCGAGCCATTGCCATGGCTTTCAAATTAGAAGCACTAGTAA ACAGTAGAGTACATAGTAGATCGAGAAAGGAGCTGCTCTTGGATGCACCCATGATTGATCAAGAGCAAGAATCGCGTGAG CTTATGGTCCAACCAAACGATTGTGCCCTTCAAGACTTTGGTAGAGCTTACAAGGAATTCTCTTCAAACTTAAAATCTGC AATACTAGATGATGACCTTGCAAAAAGCTTTCAGCTTTTGGAGAATGCTAGAAGCATTGCAAAGACATTAATTGGCAGAT CAGTGCAGTCTGTATAA
Protein sequence (LotjaGi5g1v0301900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGKQKQQVISRFFAPKSKPPSSTTDSPSPPPSSPRPNPPTPKISATVTFSPAKRRLTSQLTSPHKSPKLPKLSPHTHNHS PSLHQRFLQKLLEPSSHPSTSDPQPHSSFKSVKYTPLEQQVVELKAKHPDVLLMVEVGYKYRFFGEDAENAARVLGIYAH MDHNFLTASIPTFRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGLNKSGPFCRGLSALYTKATLEAAKDLGGDEEGCGAV SNYLLCVVEKSILGERSNCGVEGGFDVRVGIVAVEISTGDVVYGEFNDNFMRSELEAVLVSLSPAELLLGDPLSRQTEKL LLDFAGPASNVRVERASRDCFTGGGALAEVLTLYENMCVDSPSHSMQSNDLNEQSNQQLVVKEVMNMPDLAVQALALTAH HLKGFSFERILCSGASLRPFVTKTEMILSANALQQLEVLQNKIDGSESGSLLQIMNHTLTIFGSRLLRHWVSHPLCDQTL ISARLDAVCEIAESMGSFKGKKLGCFEEEPDVSIVQPELAYVLSLVLTALSRAPDIQRGITRIFHCTATPSEFIAVVQAI LSAGKRLQQLKIGEEDNNKLCSHLLKKLILTASSASVIGNAAKLLSSLDKDSADQGDIPNLIIASEGRFPEVIRARKDFQ MAVEQLDSLISLYRKRLGIRNLEFLSVSGATHLIELSTDVRVPSNWVKVNSTKKTIRYHPPEVVTALDGLSLAKEELTIA CRAAWDSFLRDFSKHYAEFQAAVQALAALDCLHSLAILSRNKSYARPVFVDDYEPVQIQICSGRHPVLETTLQDNFVPND TNMHADREYCQIVTGPNMGGKSCYVRQVALIAVMAQVGSFVPASSAKLHVLDGIYTRMGASDSIQQGRSTFLEELSETSH ILHSCTERSLVIIDELGRGTSTHDGMAIAYATLHYLLKQKKSMALFVTHYPKIASLVAEFPGSVAAYHVSHLTSHDNASK NSNLDREDITYLYKLVPGVSERSFGFKVAQLAQLPPLCISRAIAMAFKLEALVNSRVHSRSRKELLLDAPMIDQEQESRE LMVQPNDCALQDFGRAYKEFSSNLKSAILDDDLAKSFQLLENARSIAKTLIGRSVQSV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 83 | 83 | - | – | |
| PIRSF | 3 | 111 | 109 | 140.0 | ||
| MobiDBLite | 22 | 41 | 20 | - | – | |
| MobiDBLite | 42 | 66 | 25 | - | – | |
| PANTHER | 65 | 1089 | 1025 | 0.0 | – | |
| PANTHER | 65 | 1089 | 1025 | 0.0 | – | |
| PIRSF | 103 | 1071 | 969 | 2.7E-178 | ||
| Gene3D | 104 | 236 | 133 | 1.6E-48 | ||
| SUPERFAMILY | 107 | 223 | 117 | 1.03E-29 | ||
| Pfam | 115 | 225 | 111 | 9.6E-28 | ||
| Gene3D | 238 | 425 | 188 | 3.4E-50 | ||
| SUPERFAMILY | 242 | 317 | 76 | 2.88E-5 | ||
| Pfam | 242 | 334 | 93 | 9.4E-10 | ||
| Gene3D | 428 | 756 | 329 | 1.7E-70 | – | |
| SUPERFAMILY | 430 | 761 | 332 | 1.12E-51 | ||
| Pfam | 431 | 756 | 326 | 8.5E-34 | ||
| SMART | 446 | 791 | 346 | 2.0E-66 | ||
| Gene3D | 606 | 732 | 127 | 1.7E-70 | – | |
| SUPERFAMILY | 764 | 1009 | 246 | 1.81E-47 | ||
| Gene3D | 765 | 1087 | 323 | 2.1E-95 | – | |
| SMART | 808 | 1007 | 200 | 2.1E-101 | ||
| Pfam | 811 | 1009 | 199 | 1.9E-67 | ||
| ProSitePatterns | 889 | 905 | 17 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Mismatch repair | A system for the correction of errors in which an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination. | ||
| Molecular function | Mismatched DNA binding | Interacting selectively and non-covalently with double-stranded DNA containing one or more mismatches. |
Expression pattern of LotjaGi5g1v0301900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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