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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0049600 |
| Transcript ID | LotjaGi6g1v0049600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Receptor-like protein kinase; TAIR: AT1G70530.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 3; Swiss-Prot: sp|Q9CAL2|CRK3_ARATH Cysteine-rich receptor-like protein kinase 3; TrEMBL-Plants: tr|K7LRA3|K7LRA3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0049600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:8958626..8964842) extracted from Lotus japonicus Gifu genome v1.2.
AAGAGCCAAATTATTTATAATAAGTAATTTTGACCAAATCATTCAAGTTACTTGAAAATTTATCTTATGACCGAAAGTGC AAAAGTCTAAATATACTCTTCCCAACCCCATCAAGAGTCATGAATATTTCAATACACAAGTCAGGAACAAGTAATTTTTT AAAAGCAAATAAGATAAGTGATCCAAATCTGTTCCATATATAAGTGGCAATTTGAAGATGGATCTAACTCTAAGCAAAGT TCTTCTTTCCCTCAATTGTTAGTGTTAAAGTACCATTTCTCTTCAATGTGAACCCAAACAAAGTGTTGAGGTGGAATTTC ACCAGAAAAAACCTTCCCCCTTGCCATAATTTATATGCTGCACTCCCTGTTGTTGACAACGAAGTTCATTCTGTCTTTTG TCCACCGTTGACAACATCACCAACAACAATAACTTTTTCTTTGAATCATTTTATCAAACACCATTCATTTTCCATCACAG TCTTTATCTTTTCACCCAAATTTTCAACATAGTTTCCTACTTTCCTCGTACAATAGACTATGCTGCAACTTCAACACAAG CTCCTAGCCTTGACCCTGTTCTTGTTGTGGTCATGGAGGAGCTTTCACGGTGCACTGGGTGACCCTCAAACGCGGTTAAT CAACAAGGGTTGCAGCCAATACAACGCCACCACCTTGTCCACCTTCAACCAAAATCTGAACGGGACTCTTGCGGATTTGA AATCGCAGGTGAGTAATCAAAGCAAGCGTTTTGCGACGGCGCAGGAAGCAAGGGGAACGGACCCTGTTTATGCTATGTTT CAATGCCGGGATTATCTCTCTGCAGCTGACTGCGCCGCCTGCTTCACCGTCGCCGCCGCTCAAATCAGGAATTGCTCAGC CGGTGCCAATGGGGCCCGTGTCATCTATGATGGTTGCTTCCTTAGGTACAGTACAGCTTCTCCACCTATGATTATTTGTC TAATTATTTAGTATATCTTATGCTTAATTGCTTATTACTACTCTACTTGCTTAGTATATTTTAATATATCATAAATTTAA ATTATATACTTTAATCATATAAGGAATTTGATCCAGTTAGTAGGAGTAGAAGATTTTTTTGAAAGGTTGGACTTTTTTGA AGATGATTAATTAGAGCCGAATAAAAAACTTTAATTAGTAAAAAACTAGTTTAGAAATTTTATAAACATACAACCAAATA TATATCGACACAGAGTGAGTGACACAAATAAACAAAGTGGCATGTTCTAGATAATTTGGGAAACATGTCATGGGGAATTA AGGTCTAAGTTGTGGGTTGGAGGTGGACTTTTAGGTGAGGTATGCATCAAATTTAATGCCACACGCCATGCCTTTGTCAC TTCATATTTTTTTAATACGCCTGCACCTCGCCGGCAACAACGGTGTAGTGATTAGTGATTCCAATGATATATTCACACCT CATATTTTATATATTTTATTTTTATATATTTTTATTTTTATTTCTTTTCTCTTATCACTTATCACATTTTATATTTTCTC TTTTTTATTTTTTTCTTTTCTTCTTATCTCTCTCATCCATCTTTTTCCACCTTAAAAATGCGGTGTGAACAAACAGTTAT TCGTACTGATAATACATCATAATAAATTTATTATATAGTATTATCTCACAAAATTTAAATTTAAGTTATCTCATTGTTCA TAATTTTTTTAGAATAACGATTATATTGAGATGAGCTAGAGTAGAAATAGGGAGGGTAGAAATAATATAAAATATAAATG AGACTTATGACCTAACCTATATTAGGCTCATGCTTAAAAAAAGTAGGTTTTTAAATAGATTATCAAGTCAGATAAAACTT TCAAGATGCTAGGTTAAGTCCTAATTTTTTTATTTAACAAATAACAGGTCCGATCTTAAATTTTTTAAATAGGTCACACC TATTTAAATAAGGTTTAGTGACTTTAGTCTAACATTTCCACGTCCAGGTAGAAATAGTTGGATATTGTGAATTTTTTTTT AAAATAGGTCTAACATACATTCAAAAATTCAGGTCAGAGTCTAACACATTTAACTATATAAATAAATGAATAAGTATTTA ATTTAATATTTCATAATAAAAATTCAATGTAAAAGTAATTAAAATAATAAAATAAATTAATATTAAGGGAAATTATGGGT TTGGTCCTCCGGATGGTGGAGCTCCCCTGAGCATACCTAGTGACCGAAAACACTGACTTATCCGCGAATTTTTTAATTAA AATTTAAATGACACATATGTAATTAATAATTGAATTAACCAAAATTATTAATTAAAAAACTTAATCCATAATTAACTAAA CTAATTTAATTTTTACATGAACTAAACAAACATAATCTTCATCATTTTCACCCCAAATTCATCTTCATCTACCCATAAAA CACAAACCACAAACACTTTTTTTTTCTTCCAGAAAACACAATTTCCATAACACCAAACTCATACAGATGTATACCAGGCC ATTTATTTTCCATACACTCATAGAGTGCATATAATTTCTATTTGTCAGAAGAACTGGGGTTTTATGCGATTTGGTACTAG ATGTATTTTGTTTAAGATGTCAATTTCAATATTGACTACTCATGTAATTAATTTAGCTCCACTGCCAATCAACTCATCCA AAAACTTCCAATACAGTATGTTCATTTTGGAAAGATTTTCAGGTTTATACAACTCTAATATCTTGATGATCATACTTTTT TTATCACTATGAGTTCCCTTTGTTTTCCTTTTCATTACCTCAGCAAGTTACCTTAACACAAATTACCAAGAAGACGTATG CACATTATTTGCTATGTGAGTATTTTGTTTAAATTCTCAAAATATGTTTTCATGACATGTATTAAGGTACGAGAGCAATG GCTTCTTCGATCAAACCACTCTACCCGGCAACAGTATGATTTGCGGAAATGAGACTGCAAATGGAGCCTCTACTTTCACT GCAACTGCACAGCAAGTGCTACAGGATCTACAAACAGTAACACCAAAAATCACTGGTTTCTTTGCAGCTACCAAGACACC AGTGGCTGGTGGTGCAATCTATGCCATTGCACAATGTGCTGACACTGTCACAGAGAGTGGTTGTTTGGATTGCTTGACAG TAGGATTCAACAACATACAGAGTTGTCTTCCCAATTCAGATGGGAGGGCATTTGATGCAGGGTGTTTTATGAGATACTCT GAGACATCCTTCTTTGCTGATAACCAGACCATTGATATCACACCCTTCTTAAAACAAGGTATGATTAGATTGCTTACTTT ACATTGTTTGTGGAAGAATGATAGTATATTTATAGAATGTTTGGAAATCATTACAGAATTGATTTTTAAGCCAAACTGGG GTAGCTTTTGGATGCCAAAATTAATCATGACAAAAATTAACACGTTTGGATTAGGGTTGTCATAATTAATTTTGGATAAA TTTATGTTTGGATGTATTTATGAGAAAGTTGTTTTTGTATGGTAATATTGTGAGATCCAGTTGTGAAATATCAGAATTGA TTATGTTCGACGAATAAGAAACTCTCTCTAGCTTCTACCAGAATTGATTTTGGGAGTGAAATTAATTCTCCAATATGACT CCCAAGTCCCAAACATACTGTTGTCATCCAGAACTATTTTTACTCTATTAGAACTGATTATGAGCTTCTCCAACAGGAAA CCATTCACACTAAATGGGAGCTTGCACTTTACACTCAAAGATTAACGGCTTTCTTCTCTTGCAGGCGGTTCAAGCAAGAA GGGGGCTATTATTGGTGGTATTGTTGGAGGTGTAGGTCTTGTTGTAATCCTTCTTGCACTATTTGTCTGGCTTAGAAGGT ACAAGAAACCCAATAGGCATCCTAGAGGTGAGTGAGACAATTTTGAAAGTGTTTTAATTCGCAATTTCATACCCAAGACT AAACAACAATAGCATGTCAGTTCATGGTTGAAACTTGATGTCCTTGCAGGAGACTTCTGCTATTTCATGTTTATTCTATG GAGAGAATAATTTTTTTGTACATATTTTTTGTAATATGGATTGATGAATACATGGACTCATTTATATCTGAAGAAATTCC TAAGTCCTAACTATATGTTCTTTATTAGGTGACATATTGGGAGCAACTGAGCTGAAAGGTCCAGTTACCTACAGGTACAA AGATTTGAAGTCTGCAACAAAAAACTTTAGCAATGACAATAAACTAGGAGAAGGAGGTTTTGGAGATGTATATAAGGTAT ACTTAAGCTATTTTTCAACATAAAATTACATGTTAAAAAAAGTAATGATTCTGAGTGAATCTATGTTTAGTACAGGAAAA ATTGATTATAGTTATTCCTCTAGCTATTAAGATAGATCACTTTGAATATTTAGAAGACTCATAATCTTCAATTTACTGAA CAGGGCACTCTAAAAAATGGTAAAGTAGTTGCAGTCAAGAAATTGCTATTAGGCCAATCCAGCAAGATGGATGAACAATT TGAAAGCGAAGTGAAGCTTATAAGTAATGTTCATCATAGGAATCTAGTTCGACTTCTTGGATGTTGCACAAACGGCCCAG AGAGAATCCTTGTATATGAATACATGGCCAACAACAGTCTTGACAGATTCTTATTTGGTAAAAACTCATGTCAATCTCTA ATTGAAGCATTTGTGAATCTCTATTGCATATACGTTCCTCTTTCACTCAATCCATTTAGCATTGAATTTCCAAAACAGGT GAAAGGAAGGGTTCTCTCAACTGGAAACAAAGGTATGACATAATTTTAGGCACTGCAAGGGGTCTGTCCTATCTACATGA GGATTTCCATGTTTGCATCATACATAGAGATATAAAGACCAACAATATCCTCTTGGATGATGATTTTCAGCCTAGAATTG CTGACTTTGGGTTGGCAAGGCTTCTACCAGAAGACCGATCTCATCTCAGCACAAAATTTGCAGGAACATTGTAAGTCCAC ACATTTACTTCTATTATAGCATGGTGGTTGCTCACCTCGTCCCTTAACCATGAGGTCGCAGGTTCAATCCTTACCTAAAG GAAAGAAGCACATTTTGTGACCAGCCGTTTACCGCTTAGTGCGAGCACTCACGGTGAAGGGATTAGTTTTTGTTGTTGGT GGTCCCCAGGCTCACAAAAAAAAGTCTTACCCGTCTAATTGAGTTCAGCTATATGGATCACATGATCCATATTAATGTTA CAACCAATTGTACATTGGCTGCCGCTGGCTCAACACAAGCTTCCTCCTTTACCCGAGCTTAGAATTGGCAATGACACAAC ATAGGCAGAGTTTCCACCCTCGATGCTATATGTAACTATTCTTTTATGAAAAATGCTAACAAATTGTGCACTTGTCAGGG GATATACAGCTCCTGAGTATGCACTCCATGGTCAGTTATCAGAGAAGGCTGATACCTACAGCTTTGGTGTTGTAGTCCTA GAAATCATAAGTGGCCAAAAGAGCAGCGAATTGAGGGATGATGCTGATGGTGAATTCCTCCTTCAAAGGGTAAGCAATTT TGTTAATACTCACCCCAAGCTACCTCTATGGTAGAGTTAGGTCTAACCCGCATTCTACGAAATTTCACGGATATACAAAG AAGAAGAAAGTGTCATTTTTCCTTTTAAGCATTTGCTATATTGACTTATTTTTCTTACTTTATAACAGGCATGGAAACTG TATGAGGTTGAGAGGCACTTGGAGCTAGTTGACAAGACATTGAACTCTGAGGACTATGATGGTGAAGAAGTGAAAAGAAT CATAGAGATTGCTTTATTATGCACTCAAGCTTCAGCTTCTGCAAGGCCAACAATGTCTGAAATTGTAGTCCTTCTCAAAA GCAAGAACTTATTGGTGCACATGAAGCCAGCCATGCCTGTCTTTGTCGAATCAAACTTCAGGCCCCGGACAGACACATCT ACCTCAACTGGTTCCTCTACATCTAAATCTAATGCTACTGTTTCCACTTCTGTACTATCAGCTCGATGAATATATTGAGG AGAAATAAAGGATTTGAAGTTCTAAAAAAAAGAGCATTTCTTCCATTATCCCTCAAATATGAAAGTATAGTGTGAAATAA TGATTACTTGATGGTTATTTCATTGAATAGAATCGATGGTTTTTTCATAACCAAGCACATAAAATATTTCTTACATCTTC CCAATTCTTCATAGTATAAGCTTTTCCAAATCTATACAAAAACTTTCTAAATATGAT
CDS sequence (LotjaGi6g1v0049600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCTGCAACTTCAACACAAGCTCCTAGCCTTGACCCTGTTCTTGTTGTGGTCATGGAGGAGCTTTCACGGTGCACTGGG TGACCCTCAAACGCGGTTAATCAACAAGGGTTGCAGCCAATACAACGCCACCACCTTGTCCACCTTCAACCAAAATCTGA ACGGGACTCTTGCGGATTTGAAATCGCAGGTGAGTAATCAAAGCAAGCGTTTTGCGACGGCGCAGGAAGCAAGGGGAACG GACCCTGTTTATGCTATGTTTCAATGCCGGGATTATCTCTCTGCAGCTGACTGCGCCGCCTGCTTCACCGTCGCCGCCGC TCAAATCAGGAATTGCTCAGCCGGTGCCAATGGGGCCCGTGTCATCTATGATGGTTGCTTCCTTAGGTACGAGAGCAATG GCTTCTTCGATCAAACCACTCTACCCGGCAACAGTATGATTTGCGGAAATGAGACTGCAAATGGAGCCTCTACTTTCACT GCAACTGCACAGCAAGTGCTACAGGATCTACAAACAGTAACACCAAAAATCACTGGTTTCTTTGCAGCTACCAAGACACC AGTGGCTGGTGGTGCAATCTATGCCATTGCACAATGTGCTGACACTGTCACAGAGAGTGGTTGTTTGGATTGCTTGACAG TAGGATTCAACAACATACAGAGTTGTCTTCCCAATTCAGATGGGAGGGCATTTGATGCAGGGTGTTTTATGAGATACTCT GAGACATCCTTCTTTGCTGATAACCAGACCATTGATATCACACCCTTCTTAAAACAAGGCGGTTCAAGCAAGAAGGGGGC TATTATTGGTGGTATTGTTGGAGGTGTAGGTCTTGTTGTAATCCTTCTTGCACTATTTGTCTGGCTTAGAAGGTACAAGA AACCCAATAGGCATCCTAGAGGTGACATATTGGGAGCAACTGAGCTGAAAGGTCCAGTTACCTACAGGTACAAAGATTTG AAGTCTGCAACAAAAAACTTTAGCAATGACAATAAACTAGGAGAAGGAGGTTTTGGAGATGTATATAAGGGCACTCTAAA AAATGGTAAAGTAGTTGCAGTCAAGAAATTGCTATTAGGCCAATCCAGCAAGATGGATGAACAATTTGAAAGCGAAGTGA AGCTTATAAGTAATGTTCATCATAGGAATCTAGTTCGACTTCTTGGATGTTGCACAAACGGCCCAGAGAGAATCCTTGTA TATGAATACATGGCCAACAACAGTCTTGACAGATTCTTATTTGGTGAAAGGAAGGGTTCTCTCAACTGGAAACAAAGGTA TGACATAATTTTAGGCACTGCAAGGGGTCTGTCCTATCTACATGAGGATTTCCATGTTTGCATCATACATAGAGATATAA AGACCAACAATATCCTCTTGGATGATGATTTTCAGCCTAGAATTGCTGACTTTGGGTTGGCAAGGCTTCTACCAGAAGAC CGATCTCATCTCAGCACAAAATTTGCAGGAACATTGGGATATACAGCTCCTGAGTATGCACTCCATGGTCAGTTATCAGA GAAGGCTGATACCTACAGCTTTGGTGTTGTAGTCCTAGAAATCATAAGTGGCCAAAAGAGCAGCGAATTGAGGGATGATG CTGATGGTGAATTCCTCCTTCAAAGGGCATGGAAACTGTATGAGGTTGAGAGGCACTTGGAGCTAGTTGACAAGACATTG AACTCTGAGGACTATGATGGTGAAGAAGTGAAAAGAATCATAGAGATTGCTTTATTATGCACTCAAGCTTCAGCTTCTGC AAGGCCAACAATGTCTGAAATTGTAGTCCTTCTCAAAAGCAAGAACTTATTGGTGCACATGAAGCCAGCCATGCCTGTCT TTGTCGAATCAAACTTCAGGCCCCGGACAGACACATCTACCTCAACTGGTTCCTCTACATCTAAATCTAATGCTACTGTT TCCACTTCTGTACTATCAGCTCGATGA
Protein sequence (LotjaGi6g1v0049600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLQLQHKLLALTLFLLWSWRSFHGALGDPQTRLINKGCSQYNATTLSTFNQNLNGTLADLKSQVSNQSKRFATAQEARGT DPVYAMFQCRDYLSAADCAACFTVAAAQIRNCSAGANGARVIYDGCFLRYESNGFFDQTTLPGNSMICGNETANGASTFT ATAQQVLQDLQTVTPKITGFFAATKTPVAGGAIYAIAQCADTVTESGCLDCLTVGFNNIQSCLPNSDGRAFDAGCFMRYS ETSFFADNQTIDITPFLKQGGSSKKGAIIGGIVGGVGLVVILLALFVWLRRYKKPNRHPRGDILGATELKGPVTYRYKDL KSATKNFSNDNKLGEGGFGDVYKGTLKNGKVVAVKKLLLGQSSKMDEQFESEVKLISNVHHRNLVRLLGCCTNGPERILV YEYMANNSLDRFLFGERKGSLNWKQRYDIILGTARGLSYLHEDFHVCIIHRDIKTNNILLDDDFQPRIADFGLARLLPED RSHLSTKFAGTLGYTAPEYALHGQLSEKADTYSFGVVVLEIISGQKSSELRDDADGEFLLQRAWKLYEVERHLELVDKTL NSEDYDGEEVKRIIEIALLCTQASASARPTMSEIVVLLKSKNLLVHMKPAMPVFVESNFRPRTDTSTSTGSSTSKSNATV STSVLSAR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 7 | 7 | - | – | |
| SignalP_EUK | 1 | 27 | 27 | - | – | |
| Phobius | 1 | 27 | 27 | - | – | |
| Phobius | 8 | 19 | 12 | - | – | |
| PANTHER | 9 | 648 | 640 | 0.0 | – | |
| PANTHER | 9 | 648 | 640 | 0.0 | – | |
| Phobius | 20 | 27 | 8 | - | – | |
| Phobius | 28 | 266 | 239 | - | – | |
| Gene3D | 30 | 135 | 106 | 1.3E-26 | ||
| ProSiteProfiles | 31 | 135 | 105 | 18.598 | ||
| Pfam | 38 | 132 | 95 | 7.7E-18 | ||
| Coils | 50 | 77 | 28 | - | – | |
| ProSiteProfiles | 141 | 244 | 104 | 14.651 | ||
| Gene3D | 143 | 244 | 102 | 5.3E-15 | ||
| Pfam | 148 | 241 | 94 | 1.2E-11 | ||
| TMHMM | 267 | 289 | 23 | - | – | |
| Phobius | 267 | 289 | 23 | - | – | |
| Phobius | 290 | 648 | 359 | - | – | |
| Gene3D | 297 | 403 | 107 | 6.5E-36 | – | |
| SUPERFAMILY | 311 | 628 | 318 | 2.56E-80 | ||
| SMART | 327 | 604 | 278 | 6.0E-34 | ||
| ProSiteProfiles | 327 | 614 | 288 | 37.856 | ||
| Pfam | 329 | 597 | 269 | 4.6E-50 | ||
| CDD | 333 | 599 | 267 | 1.26855E-100 | – | |
| ProSitePatterns | 333 | 356 | 24 | - | ||
| Gene3D | 404 | 608 | 205 | 9.9E-58 | – | |
| ProSitePatterns | 448 | 460 | 13 | - | ||
| MobiDBLite | 620 | 648 | 29 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi6g1v0049600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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