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LotjaGi6g1v0093400.1

Overview

Field Value
Gene ID LotjaGi6g1v0093400
Transcript ID LotjaGi6g1v0093400.1
Lotus japonicus genome version Gifu v1.2
Description Chaperone protein dnaJ; TAIR: AT2G22360.1 DNAJ heat shock family protein; Swiss-Prot: sp|Q9SJZ7|DNJA6_ARATH Chaperone protein dnaJ A6, chloroplastic; TrEMBL-Plants: tr|A0A151S382|A0A151S382_CAJCA Chaperone protein dnaJ; Found in the gene: LotjaGi6g1v0093400
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr6:20109535..20117410) extracted from Lotus japonicus Gifu genome v1.2.

GAAAAATCAAGGCAAGAGAAGGGGCATTAGGGTTCTAGAAGCAGCGCAATAGAATAGAGAGAGAACTTAAAAAGATAGAG GAAAACTCGTCCACCAGGTTCTCTTTCATTCTACCAAGTAGAGCGATTAGAGAGCTTCACTTAGTTCCAACAACATAAAA CACTGTTCCTTCTTCCTCATCCCCAATTCTCATTTCACTTCCCTTCTCTTCTCTCCAACCACCACCACAACCACCACCAG GTCTCTCTTTCTATTCAATTCTTGTCATTTCTATGAATTATCACGAAAATACTTATGTTAATTCATTCGTTTATTATATA TTAGAGTATATATCGTCGATGCTGGTCTTTATTTTTTGTCATTTCTATCTAGTAATTGCTTCTTTCATTCCTAGTGCTGT TTCTCTGTATCGTTAGCATCTCAAAAATTGGTTTTTGCTGCTTTGTTTTTTTGTTTTCTTAATTGCAGGTAGCAGAATTT TATCAAGGGAATTTATATTGAGTGGCATATTGTCTACCTGGGAATAAATTAGATGGCAATTGTACCTTTTGGTAGTACTC CAGCTACTCAATGGGGGATTCGTCCTCAGCTTCTTGTGAGATCCACTGCCATGGCCAAGATTGCATCATCCACTCACAAG TCAGTCCTATCATTAATTCTTTCTTCATAAATATATTTTCATGCTCTTGCATATGATAAAGAGCTATATTAACATTTTTT ATAAGTTTTATCCATCATTTTTTATACTTTAATTGCTAGCCACAGTAGTTTTATTGTCTGGAATAGACTCGAAGTCGAAA GTCTCTGAAACTTGGGGCTATTTTTTTACCCTTTATGTCTTTTAAGTATTAATCTTCAGGAACTGCTTACACAATTGATA CACACAATTTTTTTCAGTATAGTTCATCATGTCAGTGTGCTTGGCAGTGTAATTGAATCAAGTTATTTTTTCTTGCAGCG TCACAAGCAGGGTAAGCTTTATGGCTGCTCGCAGTTCAAGCATTTTTTCCCGGGATTCCCTGCATGCACTATTTGATGCC GGTTCATCTCAAACTTTGCATCGTCGCAGGGGTTCAAGGTTGATAGTTAGAGCCGATGCAGTAAGTTTGATTACTCGTAC ATTTCTAAGCAAACGATGAAATCCATTTTGGTTTTTTCTATTCACTTGTGCATTACAACGGTATTCGGTACATATCTAAA TTATATGACATCATGTGTATTGACTGGTGTTTAATATGTGCCAATTCACAGGATTTCTATTCCACCCTTGGGGTATCGAA AAATGCTAGCAAATCTGAAATTAAGAGTGGTATTTTTCCGTGGCCCCTTCCTTTTCTAGCTAATAATGATTATGCCTCCA TCATCATCAATTGATGTGTGCAATTTTATTATTTTAATACATAGTTATCAAATTGAGATTCGAATCGTGAATTGTATTAT CGTATATCGTGTTGAATTGTTAGATTCAGAAGTATAATGAAAAACAATTAAATACATATTAAAAACAGTGTTGTCAAATC GCGATCGCGGAAAATCGCGGCGAGGCCAAAATCCGCTATTTCATTTAGCGGATAGCGTCGCGGGCAAATAGCGGTAACCG CATAGCGGTTAAAATAAGTAAAATATTATACAAAAATAGCTTGTCACAAAAGAAGAACGAAATAAAATACAGAGACAGAA TAAAAAGCAGAAAACAGAGGGTGAATAAATGAAAAACAGAAACCGGAACTGTGGAGAAAAAACGAAGTGAAAGAGATAAG GAAAGAGAGCAGAGTGAAAAAAAAAAACAGATAATTGTGAATAACGAACAAGTGAAAAGAGAAAGAGAAAGAAAATGTGA AAGAGATAAGGAAAGAAAGCAGAGTGAAAAAACATAAAAACAGATTCTGAATTCTGAAAGTTTGAATTGTGAATAGCGAA CAAATGAAAAAAGAAAAAGAAAGAAAACAGTCTGGAAATTTGAAGAAAGAAGGAAGGAAAAAAGAAAAGGAAAGAAAAGA AAATAGAGTGTGAAAAAAAGAAGTGGCATTACATTCTCCAAGCGGTGCCATTTTAGAAAAATCAGTTGGTGGCATCATTC TCCAAGCGGTGCCATTTTCTTCCACTAATTGGCATCCAATTAAATCAGTCGGTGGTATTACATTCTCCAAGCGGTGCCAT TATTGAAAATTCCCTCAAATCACGCATGAAATTAACTCCCACCCGATATTTCCGCTTTGCCCATCGCGGCGTTATTGCGA GTTGCGCCGCAATCGCGTTTGTCGCGGTGGCCGCGATGTCGCGGCGTAGCGATTGCGGCGGGCCAAATTTCCGCTACGCT ATAGCGGGTCGCGGCCGCTATAGCCGCTATTTGACAACACTGATTAAAAATGATGAGTAGTGTTTGATTTAGCAATTTCA AATTAGGAATTGACGAAACCACTTAAGCATAAGCCTTCACATGCAAACTCCAAGTTATATGTCACAAGCAGTGTTGTCAA TCCCGGATAGCAGCTGACCCCAAAACACTAGCGGTATAACGTTTAGCAGGATGGACACTATGTTGATTTTTATTCTACTC GCTATGTTGATTTTCTATTATAATCTATACTATATGCATATAAATGATGAAAAATGATAAAAAGTACTCAAAATTAATGA CATTCATAATAATAAAATGTCATGGGTCTTTCAAGCAAAGCATACGAGTGAAACAATGAAAGATTAAATCATTAAATAAA TTAACAAAAACAAAACAAAGGAAGAGGAGGCTGTTGGAATTTGTGAATAAGATAAATAAAAACTATGAAACAAGAGAAAG GGTGGATGGAGCTAAGGGAAAAGCTAACAGAAATAAAACAGAATTACAGAAACAGAGCAAAGCCAAAGACTGACAGGGGA AAATAGCAATCTGGAGTGAGAACGTGAGAAGGGATATGGAGGTCGTCGGATGGTGGCTGGAGCCTGGTTAGTGGTCACAA ATCGCGGGAGTGAGGAAGAAGCCAGATTGATGGCTTGGAGATTGAGCAGAAGGGAGAACGCGAGAAATCAGGGGGAAGAA GCGGGAGAGTGTATCCCCAAATTTTTATAACTGAAAACCCCATTTCACCCTTAAATTTTAACCTAACGACATCTTTTAAG GGTAAAATAGGGATTAAAAACCCTAAACACAATCGCGCAGCTATAGCGCCCGCGATACTGCGGTTCAGGCTGCGACGCTA ATGTGCTTCACTACAGAACTCTTGTCACGGATGGTGGCTGCTCTGCCTCTAAAGCGCATTGACATCCCTTACATGTCGAA ATATGAATAGGGCAAGAGTATAGCAAAATAAGGTATGCGTGGAGTGAGCAAGCTATTATGTGAAAGTTCCTTTGTGAGCA AGTGATTGAGTGGTTGTGCCAAGTTGCTATTTTAGAAAATGAAACATAACATTAAATAGCTAAACAAGGTTTATTGATTT GACATCATTTGATCTATGTAGCTGACTCCATCTATTGGGAAAAGATTTCGGTGGTGGTGGTTTTTGTTGTTATTGTTGGT GATGGATACTTTTCAATTGTTTGATGACAATTGGTGAAATGAAAAAAAGAAAGAAAAGAAACTACAAATCGTTGAATCAT GTGTTTCATATCAACATTTGAATCTCATTGTTCATGTCTGTATCGCATGATTCTAAGTCATTTGTGATTCATTGCATAGT ACTGATTGGCTTGATGACTTGTATTGAAAGATTCGAATTGCGAATTGTACGATTTTAATAACTATGTTTTTATATACTAA TTGATTGCTGTATTACTTAATAAATGACAATTTTTTTGTATAGCTGTGGTCTCTGGGTAATGGAAATTGATCACCACATT AAGGTTTAGTCTGTTAACTACCAAATGACTATCCCTTTCATGCCTCTTGATGCTTTCTTATCATTGGGAAATTCAGATAC TAATACTCAATAAGGTTAACCTAAAACATATTTGTAGCATAGAAGATAACTACTGACTGCTGAGAAGTGAGAACAAAATC TGAAATTTAAAAATGTCAGAGAAGTCTGCCAACCTTGGGATGGAATCTAGAGTAATAATGTTGATCAGATGTGTCAGATT TTAATTAGTGACTTATATTAAAAGAGCTTATGCCAGTTGCTGAGTGGTTTATTTTTCTTACAAAAAAAAGACATGGAGGT TAGCTTTCCAATCAGAAAATTTAATATTTTTAAATTAGTTGAACTCTTGGTGCCTTTGTTTGCTCTTTGGGACTGTTAGC CATGATGACGTTTTTGTGTAGACTAATAAATCAAATTTAAACAAGAATTTTGTTCTAAGATACTGTAGGAAAATTTTCAA CTCCACAAATTCTGACTAAACATCCATATCATTTTTTCTGGTAAGGGACTTTGGGTAGGTTTTCAAATGAAGTTTATAAT TAGTGGATGGAAGAATCAATTATTAGGGCTAATGATTCACTGTTGCAATCAAGGAGTTATTATTAACCAGATCCTCTGTT TGATTTACTTAATTTTGTGATTTTTCTGTGGGTTAATTACCTGTTACATCATTGCAATTTAATATTTTTCTATCTCTGGA CATTTCAGCTTATCGGAAGCTTGCCCGGAATTATCACCCAGATGTGAACAAGTGAGTTTTTCCCTCTTTCTCATATTACA TAATCTACTTTTTTATACCCTTCCTTTGCTTTGTTCCCACTTCTTTTATATGATACTATTCAACTCTTTTATTTTAGGCT TAATCCAGTTTTTGGTCCCTAACCTTTGTCATAAATATGGCTTTAGTCCCTCGCCGGAGTAAAGGTGGGGATTGGTCCCC AGTTTTTTGCAAAATAGTTGGCTTTAATCCCTCCGGCCGTTTGGGTCAACCCCGGAGCTCCGGGAAGCCCATGTGGCATT GCCACGTCAATTAATGAGCTTAGGTGGCTTTTTTTTTTTCATTTAAATTCTAGAGAAATACCATAATTAAAACCCTTAAA TCCCTACTTCCTAATTAATTCTTAATCTAATTAAATCATTCATTTAGTTAAAAAAAAAAATCAAAGTAGTAAATACTGCA CAGTATAACATCTCCATTTTCTCAAAACCCAGATCTGTCTTTTCTCTTCTCCACCCACAAAACTCATTTTCTCTTCAACA CCCATAGAGAAAAACACAGTAGAAAACCTGCACTAATTCATCATCCCTCTTCATTAAGCATTTCATACAATAGGACTAGC AAGAGCATCATGTAGCAAATAGGATACATAAGACTCCCATATCCAGCACATGAGCATTCCATTGAGCACCACCAACTCAA AATCTGCCTTCCAATTTCCCCGTCTACATCAGCATAAACTACCTCCCTCATTACTTGCAAGGCATCCAATAGAAAACTAC TCCAATCATCCAATGCAGCAAGCTCACGAGATTCGGAGCCACCTCAGATTCGAAGCCCAAATCTTCCAGATCTGGAAATT TGGCGAGGGTTCTGGACGAAGAGGAGAAGGTGATGGTGATGAGTTTTGAGAAAATGGGTTTGTGGGTGGAGAAGAGGAGA GACAGATCTATTGGTGGAGAAGAGAAAATGAGTTTTATGATGCTGATGATATGATGCTGAAGATATAAAATAGATGATAT GATGCTTGGTATATTTATGAAAATCACACCTTGCAAATCTGGGTTTTTTTTTATGATGATTTATGTGTTGAAGATGATGT TGATGTTGATAATGATGAAGAAGATGATATGATTTTGTTACTAATTTAAATATTTAATTATTAATTTCAGTTTTTAAAAT AATTAATAATTAAAAAAATAAAAAATCCACCTAAGCTCATTAATTGACGTGGCAATGCCACATGAGCTTCCCGGAGGTCC GGCGTTGACCTAAACGGCTGGAGGGACCAAAGCCAACTATTTTGCAAAAAACTGGGGATCAATCCCCACCTTTACTCCGG CGAGGGACTAAAGCCGTATTTATGGCAAAGGCTAGGGACCAAAAACTGGATTAAGCCTTTATTTTACTGTTGCTATGGAC AAAGTGATTTGGATTTTGGATGTATTATAGATGTAATGCTTGTAGCTTGTCCTTTGTAAAAAAAAAAAAATATGTATACT CCTAAACTGCTTATCAGATAAAATCCTCTGTCTAGGCACCTCTTCACATCACATAATTAATTATTCTAGCTGCATGATTC TCTAGTCACAATCATGAGATTAATGTTGCTTATTGCATTGATTGTTCTTTATGCTGCAGAGAACCTGGTGCAGAACAAAA GTTTAAGGACATTAGTAATGCATATGAGGTAAAACTAATCTTATTGAACGCAGCTTGCCCCAATTATTCTCTAGTCATGA TCTTCTGTAACATAAATTCTTTTGCAGGTCCTATCAGATGATGAGAAACGGTCCATATACGACAGATATGGAGAGGCTGG GCTTAAAGGTCAAGGAATGGGTATGGGGGTAAGTTACCTCTAAAGATGATGGATAATTTTAATTTCTTATCAAATATTCC TTTCTTAAAATAGAATAATCTGTGTTGTCAGGATTTCACCAGTCCTTTTGACCTCTTTGAGACACTGTTTGAGGGCATGA ATAGTGGTGGCATGGGCGGTAGAGGTTCTTGGAATGGGGCAGTTGATGGTGAAGATGAGTATTACAGTCTACTATTGAAC TTCAAAGAAGCTGTTTTTGGAGTGGAGAAGGAGATAGAGATTAGGCGATTAGAGAACTGCGGAACATGCAATGGTACAGG AGCTAAACCAGGGACCAAATCATCCAGGTGTAGCACTTGTGGTGGTCAGGGCCGGGTTGTGTCATCAACAAGGACTCCAT TAGGTATCTTTCAGCAGTCTATGACCTGCTCTTCTTGCAATGGGACTGGAGAAACTTCAACACCTTGCAGTACATGTTCT GGAGACGGGCGAGTGAGGAGAACAAAGCGTATAAGTCTCAAGGTCCCTGCTGGTGTGGATTCCGGTAGCCGTTTAAGGGT CCGAAATGAAGGCAATGCCGGAAGGCGTGGCGGTTCTCCCGGTGACCTCTTTGTTGTTCTTGAAGTTATTCCAGATCCTG TGCTTAAACGAGAAGACAACAACATTTTATACACATGTAAGGTGTCTTACATTGATGCTATCTTGGGGACTACAATTAAG GTTCCTACGGTAGACGGCATGGTGGATTTGAAAATCCCAGCTGGTACTCAACCAAGCTCAACACTTGTTATGGCTAAGAA AGGTGTTCCGGTGCTGAATAAAAAGAATATGAGGGGCGATCAATTGGTCCGAGTGCAAGTTGAAATCCCTAAAAGACTGA GCAGCGATGAGAAGAAACTTATTGAGGAACTTGCTGATTTAAGCAAAGGCAAGGCTGCCACCAGTAGGAGATAGTGTTTT TGTGGGAACCTATATGGGGCCATGAATATTCTTTTCCTTTTATGATGCTTCATTCTTGACCTTTAGATTATAAAACTGGG AAGGGTGAACTTGTGTTGGTATATGTAGGTTATGACTCTGCATAGACACAGACGGATATGGAGGGAAGAAGAAACTATAG ATCTTTTTCATGGGAATGTGCTTTTTGTAACATTATTGCCTATTGCTTTTTAGGGTTGGGTTGGGGGTTTTGAAGGATTA TACTTCATACAATGCCATCTTTATTTTTTTAGACGTTGTTTACAAATGTTATTTATAAAGGGAAAATAACTTAAACATAT TTTCCACATTAAGTTAATTTTCGCTACAATTCAAGCAATTACAGCATTAATATATAGGCCACATCCAACGGTAATTGCTA AATGAAAGCATTTGAGAGCAACTGGAATATGGACTTTTTACCGTTGGAGAGCAAGATAATAAAAAAAGCAAGAGTAGATT TGTCTGTGCACGTTGCCAAGCTAATTTAGAGTTAAG 

CDS sequence (LotjaGi6g1v0093400.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGCAATTGTACCTTTTGGTAGTACTCCAGCTACTCAATGGGGGATTCGTCCTCAGCTTCTTGTGAGATCCACTGCCAT GGCCAAGATTGCATCATCCACTCACAACGTCACAAGCAGGGTAAGCTTTATGGCTGCTCGCAGTTCAAGCATTTTTTCCC GGGATTCCCTGCATGCACTATTTGATGCCGGTTCATCTCAAACTTTGCATCGTCGCAGGGGTTCAAGGTTGATAGTTAGA GCCGATGCAGATTTCTATTCCACCCTTGGGGTATCGAAAAATGCTAGCAAATCTGAAATTAAGAGTGCTTATCGGAAGCT TGCCCGGAATTATCACCCAGATGTGAACAAAGAACCTGGTGCAGAACAAAAGTTTAAGGACATTAGTAATGCATATGAGG TCCTATCAGATGATGAGAAACGGTCCATATACGACAGATATGGAGAGGCTGGGCTTAAAGGTCAAGGAATGGGTATGGGG GATTTCACCAGTCCTTTTGACCTCTTTGAGACACTGTTTGAGGGCATGAATAGTGGTGGCATGGGCGGTAGAGGTTCTTG GAATGGGGCAGTTGATGGTGAAGATGAGTATTACAGTCTACTATTGAACTTCAAAGAAGCTGTTTTTGGAGTGGAGAAGG AGATAGAGATTAGGCGATTAGAGAACTGCGGAACATGCAATGGTACAGGAGCTAAACCAGGGACCAAATCATCCAGGTGT AGCACTTGTGGTGGTCAGGGCCGGGTTGTGTCATCAACAAGGACTCCATTAGGTATCTTTCAGCAGTCTATGACCTGCTC TTCTTGCAATGGGACTGGAGAAACTTCAACACCTTGCAGTACATGTTCTGGAGACGGGCGAGTGAGGAGAACAAAGCGTA TAAGTCTCAAGGTCCCTGCTGGTGTGGATTCCGGTAGCCGTTTAAGGGTCCGAAATGAAGGCAATGCCGGAAGGCGTGGC GGTTCTCCCGGTGACCTCTTTGTTGTTCTTGAAGTTATTCCAGATCCTGTGCTTAAACGAGAAGACAACAACATTTTATA CACATGTAAGGTGTCTTACATTGATGCTATCTTGGGGACTACAATTAAGGTTCCTACGGTAGACGGCATGGTGGATTTGA AAATCCCAGCTGGTACTCAACCAAGCTCAACACTTGTTATGGCTAAGAAAGGTGTTCCGGTGCTGAATAAAAAGAATATG AGGGGCGATCAATTGGTCCGAGTGCAAGTTGAAATCCCTAAAAGACTGAGCAGCGATGAGAAGAAACTTATTGAGGAACT TGCTGATTTAAGCAAAGGCAAGGCTGCCACCAGTAGGAGATAG 

Protein sequence (LotjaGi6g1v0093400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MAIVPFGSTPATQWGIRPQLLVRSTAMAKIASSTHNVTSRVSFMAARSSSIFSRDSLHALFDAGSSQTLHRRRGSRLIVR ADADFYSTLGVSKNASKSEIKSAYRKLARNYHPDVNKEPGAEQKFKDISNAYEVLSDDEKRSIYDRYGEAGLKGQGMGMG DFTSPFDLFETLFEGMNSGGMGGRGSWNGAVDGEDEYYSLLLNFKEAVFGVEKEIEIRRLENCGTCNGTGAKPGTKSSRC STCGGQGRVVSSTRTPLGIFQQSMTCSSCNGTGETSTPCSTCSGDGRVRRTKRISLKVPAGVDSGSRLRVRNEGNAGRRG GSPGDLFVVLEVIPDPVLKREDNNILYTCKVSYIDAILGTTIKVPTVDGMVDLKIPAGTQPSSTLVMAKKGVPVLNKKNM RGDQLVRVQVEIPKRLSSDEKKLIEELADLSKGKAATSRR 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER 31 440 410 4.2E-237
PANTHER 31 440 410 4.2E-237
SUPERFAMILY 81 183 103 1.7E-32
Hamap 81 436 356 35.717
Gene3D 81 186 106 6.8E-35
SMART 83 140 58 8.5E-29
TIGRFAM 84 429 346 3.0E-129
CDD 84 137 54 1.8885E-24
ProSiteProfiles 84 148 65 23.476
Pfam 84 145 62 8.8E-27
PRINTS 86 104 19 9.0E-29
PRINTS 104 119 16 9.0E-29
PRINTS 120 140 21 9.0E-29
ProSitePatterns 125 144 20 -
PRINTS 140 159 20 9.0E-29
SUPERFAMILY 191 345 155 2.75E-17
Gene3D 193 328 136 6.2E-35
CDD 194 416 223 9.81262E-63
Pfam 198 413 216 1.7E-38
ProSiteProfiles 210 291 82 24.722
SUPERFAMILY 210 289 80 6.15E-17
CDD 223 286 64 2.70877E-27
Gene3D 223 286 64 6.2E-35
Pfam 223 286 64 3.3E-11
Gene3D 333 440 108 1.4E-26
SUPERFAMILY 338 424 87 4.58E-22

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Biological process Protein folding The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure.
Biological process Response to heat Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism.
Molecular function Heat shock protein binding Interacting selectively and non-covalently with a heat shock protein, any protein synthesized or activated in response to heat shock.
Molecular function Unfolded protein binding Interacting selectively and non-covalently with an unfolded protein.

Expression data

Expression pattern

Expression pattern of LotjaGi6g1v0093400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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