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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0142300 |
| Transcript ID | LotjaGi6g1v0142300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Receptor-like kinase; TAIR: AT5G55830.1 Concanavalin A-like lectin protein kinase family protein; Swiss-Prot: sp|Q9FHG4|LRKS7_ARATH Probable L-type lectin-domain containing receptor kinase S.7; TrEMBL-Plants: tr|A0A072UWU3|A0A072UWU3_MEDTR Lectin receptor kinase; Found in the gene: LotjaGi6g1v0142300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:41022933..41025293) extracted from Lotus japonicus Gifu genome v1.2.
CTAAATCCCTCTGAGCATAAGAAAGTGCTGCCCCTGCCCCACCCAAATTGACATCCATCCACGGCAGTTGCAATCCCATT CCCGCTCACCCTTATTTAAAACACACCCACACCCACTCTCCCACCACCACTCACGACTAATCATTTGTTGACTCATTCTC TCTTTCTTTCTTCATTCACTTCCTCCAATCTCGTACAACACAAACAAACACACCAACCATGTCTCCAACAACAGCAACCA TCATCACTATCACCACCACCTTCTTCTTCTTCTTCTTACCTCCAACCACACTATCCCAAACCACCACCTTCAACTTCCCC TCCTTCACCCTCCGCAACATCACCCTCCTCGGCGACTCCTTCCTCCACCACGGCGCCGTCGGCCTCACCCGCTCCACCCC CGTCCCCGCCTCCAGCTCCGGCACCCTCCTCTACAACAACCCCATCTCACCCAACACCACCTCCTTCTCCACCACCTTCT CCTTCTCCATCACCAACCCCACCACTCCCTCCTCAACCGCCCACAACCGCTTCTCCTTCTTCCTCAACTCCTCCCGCTTC CTCGCCGTCGATTTCAACACCAACCGCAACCAAGTCGCCGTCGAACTAGACAACACCTTCAATCCCATCCAAACCGCAGA ACCAACCATCGATCTCAAAAGCGAGAAATTAATCACTTCTCGCATTGACTACCACAGCATCAACAAAAAGCTCACTGTTT ACTTAGCATACTCGAATTCAACAAACCCTGAACCAAAACCCATCTTGAATGCTGATGTTGATCTTTCTGGGTATTTTAAG GAGAATCTCCATGTGGGGTTTTCTGGTTCTACTGAAGGAAGCACTGAGCTTCACCAAATCGTGAGTTGGAGCTTTGAGTC CTTTCAACTGGAGCCTCAGAATCAAAGCTTGCACAATGTTTCTTCTGGTAGCAGCCCTGTGAGTGTTGCAGTGGATGGTA ATCCAGCTTCGAATTCGAACTCTACCAAGAACCGTAGTGGGAAACGATTTGCAATTGGTTTCTGTGTTGCCATTGTTGGT CCTGTTTTGTTCTGTTTAGTGCTTTCGGTTTTGGGGTATGTTTCGTTCCGGAAATGGAGTAACATGAGGAAGCAGAAGAA GAATTTTGGGGCTTGTCCTAAGGAATTTGGTTACAAGGAGTTGAAATCAGCTACAAAGGGGTTTCATTTTTCGAGGATAC TCGGGAATGGATCGTTTGGTACGGTGTATAAGGCCGTGTTTGTGTCTTCAGGAACCGTTGCGGCGGTGAAGAGGTCTAGG CATTCCCATGAGGGGAAGACAGAGTTTCTTTCTGAGCTTTCTATTATAGCTGGTTTGAGGCATAAGAATTTGGTTCAGCT CCAAGGTTGGTGTGTTGACAAAGGTGAATTGTTGCTTGTGTATGAGTTTATGCCAAATGGGAGCTTAGATAAGATTCTCT ACCAATCTGGGGGAAATAATAACAATTTGTTGAGTTGGTTTCAAAGACTTAACATTGTTGTTGGTTTAGCTTCTGTTCTT AGTTACCTGCACCAAGAATGTGAGCAGAGAGTGATCCACAGAGACATTAAAACTGGGAACATTTTACTAGATGGAAGCTT CAATCCCAGGTTGGGGGATTTTGGTTTAGCAAAGCTGATGGATCATGATAAGAGCCCTGTTTCCACTTTAACTGCTGGAA CAATGGGGTATCTTGCACCTGAGTATCTTCAATATGGGAAGGCAACTGAGAAAACTGATGTGTTCAGCTATGGTGTGGTG GTGCTTGAAGTTGCTTGTGGGAGGAGGCCAATTGAAAAGGAGGGTGAAGAGATGGTGAATTTGGTTGATTGGGTTTGGGG GCTTCACTCTCAAGGAAAGATAATTGAAGCTGCTGATAAGAAGTTGAATGGGGAGTTTCAGGAGGAGGAGATGAAAAAGC TTTTGCTGTTGGGGTTGAGCTGTGCTAACCCTGATAGTGCAGAAAGGCCTTCCATGAGAAGAGTTTTGCAGATTCTTAAC AATGAAGCAGTGCCAATTTTGGTGCCTAAAGTGAAACCAATTCTTACATTCTCATCTGGGTTGCCATTGACTCTTGATGA GATTGTCTCAGATGCTGAGAAAGAGTTTGGTTCTAGCCAGTATGTATGCCAGATAAAGATTAACTGAAGCTGCTAAGTTA GTTTATTCATTTGATTCTTTAGTTCTTTATGATGATTTTTTGTAGTAACATTGATGTTTGTAGCATGATAAATTGGGAAA TTCATAGTTCAATAACTGGAGTTCAAGCTAATCCATTGAACTTCATGGAACTACCATGTACACAAGACATATAGAAGCTT GCTATATACGGATATCAACTTCATTTTTTTGTCATTTAAGG
CDS sequence (LotjaGi6g1v0142300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCTCCAACAACAGCAACCATCATCACTATCACCACCACCTTCTTCTTCTTCTTCTTACCTCCAACCACACTATCCCA AACCACCACCTTCAACTTCCCCTCCTTCACCCTCCGCAACATCACCCTCCTCGGCGACTCCTTCCTCCACCACGGCGCCG TCGGCCTCACCCGCTCCACCCCCGTCCCCGCCTCCAGCTCCGGCACCCTCCTCTACAACAACCCCATCTCACCCAACACC ACCTCCTTCTCCACCACCTTCTCCTTCTCCATCACCAACCCCACCACTCCCTCCTCAACCGCCCACAACCGCTTCTCCTT CTTCCTCAACTCCTCCCGCTTCCTCGCCGTCGATTTCAACACCAACCGCAACCAAGTCGCCGTCGAACTAGACAACACCT TCAATCCCATCCAAACCGCAGAACCAACCATCGATCTCAAAAGCGAGAAATTAATCACTTCTCGCATTGACTACCACAGC ATCAACAAAAAGCTCACTGTTTACTTAGCATACTCGAATTCAACAAACCCTGAACCAAAACCCATCTTGAATGCTGATGT TGATCTTTCTGGGTATTTTAAGGAGAATCTCCATGTGGGGTTTTCTGGTTCTACTGAAGGAAGCACTGAGCTTCACCAAA TCGTGAGTTGGAGCTTTGAGTCCTTTCAACTGGAGCCTCAGAATCAAAGCTTGCACAATGTTTCTTCTGGTAGCAGCCCT GTGAGTGTTGCAGTGGATGGTAATCCAGCTTCGAATTCGAACTCTACCAAGAACCGTAGTGGGAAACGATTTGCAATTGG TTTCTGTGTTGCCATTGTTGGTCCTGTTTTGTTCTGTTTAGTGCTTTCGGTTTTGGGGTATGTTTCGTTCCGGAAATGGA GTAACATGAGGAAGCAGAAGAAGAATTTTGGGGCTTGTCCTAAGGAATTTGGTTACAAGGAGTTGAAATCAGCTACAAAG GGGTTTCATTTTTCGAGGATACTCGGGAATGGATCGTTTGGTACGGTGTATAAGGCCGTGTTTGTGTCTTCAGGAACCGT TGCGGCGGTGAAGAGGTCTAGGCATTCCCATGAGGGGAAGACAGAGTTTCTTTCTGAGCTTTCTATTATAGCTGGTTTGA GGCATAAGAATTTGGTTCAGCTCCAAGGTTGGTGTGTTGACAAAGGTGAATTGTTGCTTGTGTATGAGTTTATGCCAAAT GGGAGCTTAGATAAGATTCTCTACCAATCTGGGGGAAATAATAACAATTTGTTGAGTTGGTTTCAAAGACTTAACATTGT TGTTGGTTTAGCTTCTGTTCTTAGTTACCTGCACCAAGAATGTGAGCAGAGAGTGATCCACAGAGACATTAAAACTGGGA ACATTTTACTAGATGGAAGCTTCAATCCCAGGTTGGGGGATTTTGGTTTAGCAAAGCTGATGGATCATGATAAGAGCCCT GTTTCCACTTTAACTGCTGGAACAATGGGGTATCTTGCACCTGAGTATCTTCAATATGGGAAGGCAACTGAGAAAACTGA TGTGTTCAGCTATGGTGTGGTGGTGCTTGAAGTTGCTTGTGGGAGGAGGCCAATTGAAAAGGAGGGTGAAGAGATGGTGA ATTTGGTTGATTGGGTTTGGGGGCTTCACTCTCAAGGAAAGATAATTGAAGCTGCTGATAAGAAGTTGAATGGGGAGTTT CAGGAGGAGGAGATGAAAAAGCTTTTGCTGTTGGGGTTGAGCTGTGCTAACCCTGATAGTGCAGAAAGGCCTTCCATGAG AAGAGTTTTGCAGATTCTTAACAATGAAGCAGTGCCAATTTTGGTGCCTAAAGTGAAACCAATTCTTACATTCTCATCTG GGTTGCCATTGACTCTTGATGAGATTGTCTCAGATGCTGAGAAAGAGTTTGGTTCTAGCCAGTATGTATGCCAGATAAAG ATTAACTGA
Protein sequence (LotjaGi6g1v0142300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSPTTATIITITTTFFFFFLPPTTLSQTTTFNFPSFTLRNITLLGDSFLHHGAVGLTRSTPVPASSSGTLLYNNPISPNT TSFSTTFSFSITNPTTPSSTAHNRFSFFLNSSRFLAVDFNTNRNQVAVELDNTFNPIQTAEPTIDLKSEKLITSRIDYHS INKKLTVYLAYSNSTNPEPKPILNADVDLSGYFKENLHVGFSGSTEGSTELHQIVSWSFESFQLEPQNQSLHNVSSGSSP VSVAVDGNPASNSNSTKNRSGKRFAIGFCVAIVGPVLFCLVLSVLGYVSFRKWSNMRKQKKNFGACPKEFGYKELKSATK GFHFSRILGNGSFGTVYKAVFVSSGTVAAVKRSRHSHEGKTEFLSELSIIAGLRHKNLVQLQGWCVDKGELLLVYEFMPN GSLDKILYQSGGNNNNLLSWFQRLNIVVGLASVLSYLHQECEQRVIHRDIKTGNILLDGSFNPRLGDFGLAKLMDHDKSP VSTLTAGTMGYLAPEYLQYGKATEKTDVFSYGVVVLEVACGRRPIEKEGEEMVNLVDWVWGLHSQGKIIEAADKKLNGEF QEEEMKKLLLLGLSCANPDSAERPSMRRVLQILNNEAVPILVPKVKPILTFSSGLPLTLDEIVSDAEKEFGSSQYVCQIK IN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 26 | 26 | - | – | |
| Phobius | 1 | 4 | 4 | - | – | |
| TMHMM | 4 | 26 | 23 | - | – | |
| Phobius | 5 | 20 | 16 | - | – | |
| Phobius | 21 | 26 | 6 | - | – | |
| Gene3D | 27 | 222 | 196 | 5.7E-40 | – | |
| Phobius | 27 | 263 | 237 | - | – | |
| SUPERFAMILY | 28 | 225 | 198 | 2.19E-33 | ||
| Pfam | 111 | 229 | 119 | 3.5E-19 | ||
| PANTHER | 118 | 624 | 507 | 3.2E-179 | – | |
| PANTHER | 118 | 624 | 507 | 3.2E-179 | – | |
| MobiDBLite | 230 | 258 | 29 | - | – | |
| Phobius | 264 | 290 | 27 | - | – | |
| TMHMM | 266 | 288 | 23 | - | – | |
| Gene3D | 286 | 397 | 112 | 3.9E-29 | – | |
| Phobius | 291 | 642 | 352 | - | – | |
| SUPERFAMILY | 307 | 616 | 310 | 2.43E-80 | ||
| ProSiteProfiles | 322 | 601 | 280 | 39.919 | ||
| SMART | 322 | 598 | 277 | 4.3E-43 | ||
| Pfam | 322 | 591 | 270 | 6.2E-51 | ||
| ProSitePatterns | 328 | 351 | 24 | - | ||
| CDD | 328 | 595 | 268 | 3.33529E-102 | – | |
| Gene3D | 398 | 599 | 202 | 8.9E-64 | – | |
| ProSitePatterns | 445 | 457 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. | ||
| Molecular function | Carbohydrate binding | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates. |
Expression pattern of LotjaGi6g1v0142300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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