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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0199200 |
| Transcript ID | LotjaGi6g1v0199200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Receptor-like kinase; TAIR: AT2G23950.1 Leucine-rich repeat protein kinase family protein; Swiss-Prot: sp|Q0WVM4|Y2239_ARATH Probable LRR receptor-like serine/threonine-protein kinase At2g23950; TrEMBL-Plants: tr|V7CC39|V7CC39_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0199200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:49597710..49603071) extracted from Lotus japonicus Gifu genome v1.2.
GAGAGGCCCAATGAAGCAGAAAAGGAAACTATAAGAAAAATGAAAAAGAAAAAGCAGAAAACAAGTGTGTATGTGTGTGT GTGAGACATCAACAAAGAAAAGCAACTTCGTACATAAGAGAATTGCTTTTACCTTCTACTTTGATGTGCTTCCCTTGTTC CATTCTGCTCACTGTCATTGTTCCATAATCATGGCTTCCAATCAAGTTCTCGTCCTCCTCTTCTTCCTCTTCTTCTTCCT CTCTCGTGCACCTCTTTCTTCTTCTTCAGAGCCTCGCAACCATGAAGGTACAAACAAACAACCCTCTTCACTGTAATTGC CTAAACGACAAAGAAACTAAAAAACAAACCAACAAGCAAACACCCTTTATCTTGTTCTTCTTCTAGTTCCTTGTTTGAAG GTTTAATGTTGAAAATGTTTGCTCATTGATTGTAGTGGAGGCTTTGATGAGTGTCAGAGCTGAACTGAATGATCCTCATG GTGTGCTCAACAACTGGGATGAGTTCTCTGTTGACCCTTGCAGCTGGGCCATGATCACTTGCTCCTCTGATTACCATGTT ATAGGCCTGTAAGCTTTTCTTCTTCTTCATTGTTGCATTTGCTTTTTCATCATTTCCATGCTTTTTGTGTATCATTCCAT TGTTAATTGTTGTTTTTGTTTCTGGGTTTTTTTCTGTTGTTGTTGTTGCAGGGGAGCACCTAGTCAATCTCTCTCTGGTA CTTTGTCTCCAGCAATTAGAAACCTTACCAATCTTCAACAAGTGTGAGTAAAAACAAACTCATTTTGTTCTTATTAGTAT TCATCTTGTTTTCTGAGCTGTTTGTCTCTATCAGCTTTGAAAATGGTTGCAAAACATGTTATGGAACTTGCTTACTTGTT TCTGTTGTTTTATCTGTAATGGGGTTGTGATAATTTCTGGTTCTTTGTTGAGTGCAGGTTGCTGCAGAACAATGACATCT CTGGCAAAATACCACTAGAGCTTGGTTTGCTTCCCAGGCTTGAGACTCTAGATCTTTCCAATAACAGGTTCTCTGGGGTG ATTCCAGGGTCTCTTGGTCAGTTGAATAGTCTCCAATATCTGTGAGTGATTCCTTTTGCTCCCCATTTTCTCTTTCTTTC CTGAGAAAGTGCGGGAAAATGACTTCAAAATGATTCCTTCTGTGTTTAGTTGAGCAACAATTGGCCGCTATCTGCGGTTA TTGTTGACTTGAAAAGGAGATCATATTATTGTTGTATATACCCTTTAGCTTTTGCATATAATTGCTTCAGAGACTAGGTT TCACTTTACTTTTGAAGTAATTTTTGAGATGCTACTTTATCTTTGCTTCACATCTTGTAATGTGAATATGTAATGAATTA ACTTTTTGATTTTTTACCAAAATTTGAGCAGGAGGCTGAACAACAATAGCTTATCTGGACCCTTTCCTGTGTCATTAGCC AAAATCCCAGAACTTGCTTTCTTGTGAGTATGGCTATCTAAGTTTTTCAATCTGTTAATACGTTTTCCAACTTGCTCACT TCTTGAAAATAGTATAATAACCTGCAACCTGTTGATTTCTATGTACTTTTGTCATCATTCTTGGCTGATGTGATAATTCT ATGCATTTAGGGACTTGTCTTATAACAATCTCAGTGGACCCTTGCCTAAGCTTCCAGCTAGATCATTTAAGTATGATTAC TCTTTGATTCTGTTTCTTTTTACTTATCTTAGTTTTTGCTGTGCCTAGTCCCTGATTAACTTTTTCTTATGTAGTGTTGT AGGAAACCCATTAATTTGTGGAAGCAGCTCCACTGAAGGTTGTTCTGGTTCAGCAACATTTCTACCTGTTTCAATTTCTC TAGCATCATCTCAAGGTGCTTGCCTTATACCTACTTCGGCATGATTGTTTTCCTCTTTATACTGCTTCTTTGTAACCTGT ATTAAATATCTGTTTGTAGGGAAATACAAGTCCAAGAAACTAGCACTGGTTCTTGGGATTAGCCTTAGTAGTGTTTGTCT CGTCTTCCTGTTTTTGGGGCTTTTCTGGTATAGAAAGAAATGGCAGAACCAAGCAATCCTGTACCTTGGTGGTAGGTGGC ACTGGAATGAATAGCTTGTTTAGATTACATATATTAAGGGTTAGGCATCTGTATTTATGATTATTGCTTTGTGGCAGATT ATCATCTGGAGGAGGAACTTGTTAGCTTGGGAAATCTGAAAAAATTCACTTTCAGAGAGCTCCAAAATGCAACAGATGCT TTCAGCTCCAAGAACTTACTTGGTGCTGGAGGCTTTGGCAATGTTTATAGAGGGAAACTTGGAGACGGTTCAATGGTGGC AGTAAAAAGGCTAAAGGATGTGACTGGAAGTGCTGGTGAATTACAATTCCGAACAGAAATGGAGATGATCAGCTTGGCAG TTCACCGCAATTTACTTCGCTTAATTGGATATTGCGCTTCTCCTAATGAAAAGCTTCTGGTTTATCCTTTTATGTCCAAT GGCAGTGTGGCCACCAGGCTTAAAGGTATGCTAATGGTGTTGAATGGTCCCTTTGTGCTTATGGTCTTTATCACAGAGCA GTGATCATGTGATATGATACATCTTATGAATGCAGTGTTATATTACTATCACATTACCTGTTTTAATCATGTGATGTAGA GTTGTCAATGTTTTGGTCTAACTCTATTTCATTGTTAAGGGACATTAATATCTGCTGCAAGGCCAATATGGATGGGATAG GGAACAATGTCTAATATAGTAGTCTATTTCTTGAAGTCTGTACATTACATGTATATAAGAATTTAGTCTTAGTCTCACCA TTAATTTTGCAGGCATACTTTTGATGTTGAGTATTTTGAATCCAACTACATTTGCTGTTTATGTCGAGCAATTGACATCA CAGTTACTGGGCATAACTAGTGGAATCATATTATTGAAGTTATTGTTTAAGAAATTGTCATTAATGGACTGAAACTGGTG ACATAATCTAAACCTGCAATTCATTTTATTAGTTTCAAAATTCATATATATGGTTTTAAAAATTTAAGTCATGATCAAGA AAATGTCTCATACTTAGGGATACACCAACTATAAATAAGTGTGCAATCTTCCTCAACACTCTGGTGAATTTGAAACAATT TTAGTCTTATCAGGGTTACAGGATGTTCATCCAAGGTTCAATACACTTAATGTATAAGTTTGATAATATTTGTTCCTTTT TTAGTCTAAGAGAAGTTAAAATAGCAAATTCATTCTGTCTTTTAATAGTCTACATAATAACAAGTGTTGGTAGTTATTTC CTCATGAACTCTACCAATCATATGTTTACCTCTCATGTTCTGTTGCTTTGGAATATCCTGGGGTTTAAAATCATATATAT GAAATGATAGGCAAACCCGCTTTAGACTGGAATACAAGAAAGAGAATAGCAATTGGAGCTGCCAGAGGTCTACTCTATCT ACATGAGCAGTGTGATCCTAAGATAATACACAGAGATGTGAAGGCTGCAAATGTGCTTGTGGATGAATATTTTGAAGCTG TTGTTGGTGATTTTGGCCTTGCAAAGCTCCTTGACCATGCTGACTCCCATGTCACCACCGCTGTCCGCGGAACTGTCGGG CACATAGCACCAGAGTACCTCTCCACTGGTCAATCGTCTGAGAAAACTGATGTATTTGGATTTGGCATTCTCTTGTTGGA GCTCATAACTGGAATGACAGCTCTCGAGTTTGGAAAAACACTGAATCAGAAAGGAGCAATGCTAGAGTGGGTAAGTAAAT CTATTCTCAGCAGTCTAAACTCTAAGCAAACCATTAATGCATTCCATTTCTAGTATTAGACATAATAATGCAGTATTTAG TCTGGGATCTAGGTATGTTCCATACTAAAGGCATTTATTTAACACTTATGCATGTCTTTCATTGTACTTAATTGGGTATG GCTTAGTTCTTTTACTGAAATGTCTTTCAATTTTAACTTCCAGTCCTTATTATAAGAACCTTATATGATAACTAATGTCC ATTAAAAAATAGTTCATGCTGTTACTACTTACTAGCATTAAATTTGTCCTCAATTTACATCAACTTTCCAAGTGGGGACA AAATTTGTTAACTAAAAATATTTTGGGACACTTGTTCTCTGCTATGTAATTAAACTGACAGGCTTTTAGATGTTACTAAA GATTGTCTTCATTACTGATTACCCATATATGCCTTATATTTGACTTTGCTGTTCTAAGTTTTAACTCAATTCTACTTCAA ATGGTTAAAAAATGTAAATATAGTTTACAGTTGGTCCCTGAATACTAGAAATTTCTCATCTTTATGTCCAAAACATTTAG CATGTTTGGGTTCATTTCTCTTCTCTCATAATCAATCCTGACACCTAGAAGCTGCTCACAGTGCATATTTGAAAACCCTT CTAGAGCTGGAATCAATTCTCAGAAGCATTTTCCAAATTATGTTGTGATCAAAGCATTTTCTCCCTCATTAAGTATCTAA GTACACTAGAAAGTTTGCCAAAAGGAATGGTGTAAATTGGAGATCAAATAATGACCACATACATGTTGTGACAGGTGAGG AAAATACAGCATGAAAAGAAAGTAGAACTGTTGGTGGACAAGGAACTAGGGAGCAACTATGACAGGATTGAAGTTGGGGA AATGCTGCAAGTAGCTCTACTCTGCACTCAATGTTTACCAGCCCTTCGTCCCAAAATGTCTGAAGTGGTCCGAATGCTTG AAGGCGATGGTCTTGCTGAGAAGTGGGCAGCATCACATACTAATCATGGCAGTCTCAGTCTAAACAACACCCTCCACAGC AATTGCAGCAAAAGCTCATCTCATCATTCCAATGCTTCAAACCATGATGACAACAATAAAGCTCATTATGATCGTTCCAG CACGTTTGGCATGACAATGGATGATGATGATGGTGATGAACATTCTTTGGATTCCTATGCTATGGAACTCTCTGGTCCTA GGTAACCAAAAAAAAGATTCTGGTTCAAAACACACCAAGATATAGAAGGAGAATGAATTCTTTTGGTTCCTGTCAATATT CTTTAGAAAAGGGGTTTTATTGATATTGATTGTTCTAGAATATAATCTTGTATATACTCTATATGTTAAATTTTGTCATG TTTGGTTTGTTTCATTTGGGTACAAAGAGACTATGTATAGGTGAAGGGAAGACAATCATATTTTTTTTCTTCTTCTCAAG TGTTTGAGCCTTTGAGGCAAAATTAAGTGATAATTTTTTCACACCTATTATTATTTACAGTCCCCCTCCCCCTACAATTT CCCCTTTTTGTCTTCACAATTACAAAGAATGTTATGTAAATGTAGTGTTCTGCTATCCTATTTCTATTATATAAACCTTG TC
CDS sequence (LotjaGi6g1v0199200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTGTGTGTGTGAGACATCAACAAAGAAAAGCAACTTCGTACATAAGAGAATTGCTTTTACCTTCTACTTTGATGTGCT TCCCTTGTTCCATTCTGCTCACTGTCATTGTTCCATAATCATGGCTTCCAATCAAGTTCTCGTCCTCCTCTTCTTCCTCT TCTTCTTCCTCTCTCGTGCACCTCTTTCTTCTTCTTCAGAGCCTCGCAACCATGAAGTGGAGGCTTTGATGAGTGTCAGA GCTGAACTGAATGATCCTCATGGTGTGCTCAACAACTGGGATGAGTTCTCTGTTGACCCTTGCAGCTGGGCCATGATCAC TTGCTCCTCTGATTACCATGTTATAGGCCTGGGAGCACCTAGTCAATCTCTCTCTGGTACTTTGTCTCCAGCAATTAGAA ACCTTACCAATCTTCAACAAGTGTTGCTGCAGAACAATGACATCTCTGGCAAAATACCACTAGAGCTTGGTTTGCTTCCC AGGCTTGAGACTCTAGATCTTTCCAATAACAGGTTCTCTGGGGTGATTCCAGGGTCTCTTGGTCAGTTGAATAGTCTCCA ATATCTGAGGCTGAACAACAATAGCTTATCTGGACCCTTTCCTGTGTCATTAGCCAAAATCCCAGAACTTGCTTTCTTGG ACTTGTCTTATAACAATCTCAGTGGACCCTTGCCTAAGCTTCCAGCTAGATCATTTAATGTTGTAGGAAACCCATTAATT TGTGGAAGCAGCTCCACTGAAGGTTGTTCTGGTTCAGCAACATTTCTACCTGTTTCAATTTCTCTAGCATCATCTCAAGG GAAATACAAGTCCAAGAAACTAGCACTGGTTCTTGGGATTAGCCTTAGTAGTGTTTGTCTCGTCTTCCTGTTTTTGGGGC TTTTCTGGTATAGAAAGAAATGGCAGAACCAAGCAATCCTGTACCTTGGTGATTATCATCTGGAGGAGGAACTTGTTAGC TTGGGAAATCTGAAAAAATTCACTTTCAGAGAGCTCCAAAATGCAACAGATGCTTTCAGCTCCAAGAACTTACTTGGTGC TGGAGGCTTTGGCAATGTTTATAGAGGGAAACTTGGAGACGGTTCAATGGTGGCAGTAAAAAGGCTAAAGGATGTGACTG GAAGTGCTGGTGAATTACAATTCCGAACAGAAATGGAGATGATCAGCTTGGCAGTTCACCGCAATTTACTTCGCTTAATT GGATATTGCGCTTCTCCTAATGAAAAGCTTCTGGTTTATCCTTTTATGTCCAATGGCAGTGTGGCCACCAGGCTTAAAGG CAAACCCGCTTTAGACTGGAATACAAGAAAGAGAATAGCAATTGGAGCTGCCAGAGGTCTACTCTATCTACATGAGCAGT GTGATCCTAAGATAATACACAGAGATGTGAAGGCTGCAAATGTGCTTGTGGATGAATATTTTGAAGCTGTTGTTGGTGAT TTTGGCCTTGCAAAGCTCCTTGACCATGCTGACTCCCATGTCACCACCGCTGTCCGCGGAACTGTCGGGCACATAGCACC AGAGTACCTCTCCACTGGTCAATCGTCTGAGAAAACTGATGTATTTGGATTTGGCATTCTCTTGTTGGAGCTCATAACTG GAATGACAGCTCTCGAGTTTGGAAAAACACTGAATCAGAAAGGAGCAATGCTAGAGTGGGTGAGGAAAATACAGCATGAA AAGAAAGTAGAACTGTTGGTGGACAAGGAACTAGGGAGCAACTATGACAGGATTGAAGTTGGGGAAATGCTGCAAGTAGC TCTACTCTGCACTCAATGTTTACCAGCCCTTCGTCCCAAAATGTCTGAAGTGGTCCGAATGCTTGAAGGCGATGGTCTTG CTGAGAAGTGGGCAGCATCACATACTAATCATGGCAGTCTCAGTCTAAACAACACCCTCCACAGCAATTGCAGCAAAAGC TCATCTCATCATTCCAATGCTTCAAACCATGATGACAACAATAAAGCTCATTATGATCGTTCCAGCACGTTTGGCATGAC AATGGATGATGATGATGGTGATGAACATTCTTTGGATTCCTATGCTATGGAACTCTCTGGTCCTAGGTAA
Protein sequence (LotjaGi6g1v0199200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MCVCETSTKKSNFVHKRIAFTFYFDVLPLFHSAHCHCSIIMASNQVLVLLFFLFFFLSRAPLSSSSEPRNHEVEALMSVR AELNDPHGVLNNWDEFSVDPCSWAMITCSSDYHVIGLGAPSQSLSGTLSPAIRNLTNLQQVLLQNNDISGKIPLELGLLP RLETLDLSNNRFSGVIPGSLGQLNSLQYLRLNNNSLSGPFPVSLAKIPELAFLDLSYNNLSGPLPKLPARSFNVVGNPLI CGSSSTEGCSGSATFLPVSISLASSQGKYKSKKLALVLGISLSSVCLVFLFLGLFWYRKKWQNQAILYLGDYHLEEELVS LGNLKKFTFRELQNATDAFSSKNLLGAGGFGNVYRGKLGDGSMVAVKRLKDVTGSAGELQFRTEMEMISLAVHRNLLRLI GYCASPNEKLLVYPFMSNGSVATRLKGKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLVDEYFEAVVGD FGLAKLLDHADSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMTALEFGKTLNQKGAMLEWVRKIQHE KKVELLVDKELGSNYDRIEVGEMLQVALLCTQCLPALRPKMSEVVRMLEGDGLAEKWAASHTNHGSLSLNNTLHSNCSKS SSHHSNASNHDDNNKAHYDRSSTFGMTMDDDDGDEHSLDSYAMELSGPR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 37 | 37 | - | – | |
| TMHMM | 13 | 30 | 18 | - | – | |
| Phobius | 38 | 57 | 20 | - | – | |
| TMHMM | 40 | 62 | 23 | - | – | |
| Phobius | 58 | 273 | 216 | - | – | |
| Gene3D | 64 | 251 | 188 | 5.1E-54 | ||
| SUPERFAMILY | 69 | 240 | 172 | 2.43E-35 | – | |
| Pfam | 70 | 109 | 40 | 3.7E-12 | ||
| PANTHER | 158 | 627 | 470 | 1.4E-206 | – | |
| PANTHER | 158 | 627 | 470 | 1.4E-206 | – | |
| SMART | 159 | 182 | 24 | 1.5 | ||
| Pfam | 160 | 220 | 61 | 3.1E-12 | ||
| PRINTS | 162 | 175 | 14 | 3.5E-5 | – | |
| SMART | 183 | 214 | 32 | 44.0 | ||
| PRINTS | 207 | 220 | 14 | 3.5E-5 | – | |
| Phobius | 274 | 297 | 24 | - | – | |
| TMHMM | 274 | 296 | 23 | - | – | |
| Phobius | 298 | 689 | 392 | - | – | |
| Gene3D | 311 | 415 | 105 | 1.1E-33 | – | |
| SUPERFAMILY | 318 | 609 | 292 | 3.28E-72 | ||
| ProSiteProfiles | 339 | 589 | 251 | 34.633 | ||
| SMART | 339 | 594 | 256 | 2.2E-28 | ||
| Pfam | 340 | 587 | 248 | 5.1E-40 | ||
| ProSitePatterns | 345 | 367 | 23 | - | ||
| Gene3D | 416 | 625 | 210 | 2.4E-56 | – | |
| ProSitePatterns | 458 | 470 | 13 | - | ||
| MobiDBLite | 635 | 689 | 55 | - | – | |
| MobiDBLite | 645 | 671 | 27 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi6g1v0199200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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