Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0351000 |
| Transcript ID | LotjaGi6g1v0351000.3 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | DNA helicase; TAIR: AT2G14050.1 minichromosome maintenance 9; Swiss-Prot: sp|F4IFF3|MCM9_ARATH Probable DNA helicase MCM9; TrEMBL-Plants: tr|K7M9S9|K7M9S9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0351000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:66297475..66304338) extracted from Lotus japonicus Gifu genome v1.2.
AACACCGAGGATCCAGGTCACTGGAAGAAGCCAATGGCCAGCTACCTCGTCCGCCACCATCCCGATCAGCTCAACTCCAT TGCTTCTTCTCCCGATCCCAACATTCATTACCCTCTTCACATCGATTTCGCTGAGTTGATGGAAGATGATCATCGCATTG CCCATCTCCTCTTTGCCCAACCCAACACCTACCTGCAAATCTTCGATGACGCTGCTCTCTGGGCTCATGTATTGTATTCC TAAATTCTCTCATTTATTATTTTATTTTATTTTAATTTGGATGTGACAGAAAAATTTGAAACTTTACTTGATTTTGTGAT GTGGGTCGTGTAGAAAATTGTATTGGGAGATATGGAGGAAGGGGTTGAGAAAAAATTCATTCATGTTCGCGTTAACGTCT GCGGCTCTCCCCTTGAATGCCCTGGTTTGCTTCTGCCCGCTACTTGTTTGTCGAAATTCCCCTTAAAGGAGGACCCTTCA CTGACCTCAATTGTTGTTGTGGATGACTTGTGTTATGTGTATTAGAGACTTTTCCGAGCATAGGACGTGTTCGAGTGCAG CACCGTGGAATCCTTCTCACTCTCAAAGGGATAGTGATCAGGTCCGGAGCGATCAAGATGCATGAAGGAGAGAGGAAATA CATGTGTCAAAAATGCCAAAGCAGGTGCAGCATATTCCTCTTGTTCTTGTTGGAGAAAATTGTCACATGTACCTCATGAT ACGTCTGTTGATTATCAATTAACAAAGCATGTGTGCAGCTTCCCAGTTTATCCTGAGGTGGAAGCTCGAAACGCCATATC ATTACCCTCATTTTGCCCAATTCAGGTATCACCTGCAGGCTGCATCTGAGTTTTAAGTCCTGTATTTCCCCTACCGTCTC CTTGGACATGTCCCTATTGCATTACCCAGAATTAGATAAAGAGAATCATGATATGTACTATGTAGTGTTGATTTTTGAAG TCATATATTAAAATGTAATAGAAAAGTGCCACGTTTAGAATTTGCTACCACTATGTGAAGCTTAAACTTTCGTTTTTTAA TTTTTAGCCTTCAAATATCTAGGTGCTCATTTTTCTGTAACACTGATATTACTATACTAGTATACTTTTAAATTGGCTGA AATCCTCATTCATATGGTTTTGTTAGTTACTTGTTGTTCTTTGTGGCAGAGGTCTAAGCCCTGTGGAGGTGTAAAATTCC AGTATGTAGAGAATACTATAGTATGTCATGATTATCAGGAGATAAAAATCCAAGAAAGTACACAGGTGCTAGGTGTTGGG GCAATTCCTCGTTCAATTCTTGTCATCTTGAAGGATGACCTTGTTGATGTTGTTAAAGCTGGAGGTAATTAGATTTTTCA TCTTCTTCTTGCCAAATATATGATAGATACACGGTATTGAAAATTATGTTATGATATACACATGGTATTTTAATATCTGG CCTGAGCTAGATTCTAGTTAATACTTGTTGGCCTACTTTCAGTCTTCCAGTATTGGATCTAAGAAATCTAATTCATATAT TAGGAATTTTCCTTTCTTAAGCTTATGAATGGTGTATCCTGGATTTTTTATAAGTTATAATGAATCTGGCATAGCTTCTC TCTCTCCATGTTGGTCTTATTGTTTTTCTTTCAAACTATTACTGGCCGTTAGTTGTTACTATGTGGGGAACTTTTTTTTT TCTTATGTGTTTGCGACTTTCTGATAAGTTATGGCTTGCATTTGATTTTGGGCTTGGCGTGACATATGATCTCACTGACA TATTTGATTTCTTGTTTCTTTTCACCCTTGCAAGATTTTTACCTTTTGCTTCCTGGCCCTTGTAAGCAGTGTGTTGACTA GGGCAGTAAGGCTTAAAGGAGCATGATTAATTCATAAACGCAATATTTGTTGTTGGAAGTTCGTTGTGAAGGATTACTTG TTTTTCGCTTGCAGATGATGTGATTGTCACTGGTCTCTTAACAGCAAAGTGGTCTCCAGAGTTGAAGGATGTGCGCTGTG ACCTTGATCCTGTTTTGATAGCCAACAGCATAAGGTGAAAAAGTAGTTCTCACTGTGTTTGCCCTTTAAAAATTTGTAAG AAAGTAAAACTTCCTAGTATTTGACATTTGCTGTTTTGGTGCGCTTCATGGAAAAGTTTCACAAGTGATAAATATATTTA TTCGTGCGTGAAAGGGAGCAAGTTTTACATATTACATGATAAACATTCTTAAATGAAGAACAGATGCAGTGATTTCTGGA TTTGAACTTATTATTCTTTAAATTGTAGTCATTTACTTTTGATGGAAGGAAAGCAAAAAAATATGATAAGTTTGTTCTGT ATATTTTCTCATTGTTATCAGGAGAATCAATGAACTGAAGTCAGAAATTGATATTTCCGATGATCTTGTTACGAAATTCA AGCAGTTTTGGGATCACTTCAAAGATGCGCCTTTAAAAGGTGCTTTCCCATAACACATCTTTGGTATCCCTTGTATCATT CAAATTTATAGTTCTGAACCATTAGTAAATGTTTCTCCCAATATTTATTATCTTATGCTTTCCTTAAGAAACCGCATAGC GCAATTCCTAAAATGTTTGGTCCAACTTTGCCCGTACGCTTACACCAACTTTTAATGAATGTAAAAGTTTTATGTGGAAG GTTATGATTTATGAATTATGTGATATGAAATGAAAACTTAAAAGCCATTTCAAACTGATCCAGGGAGGAATGCCATTCTA CGAGCAGTTTGCCCACAAGTATTTGGTCTTTTCACAGTCAAGCTGGCTGGTAAACATTTTCACCGAATGGCTATTTACTT ATTCACCTTGAAATTCATTACACTTTAACATATGTTTGCTACTTGCATTTTAGAAGCTGTGTTCGCATGCTTACAGCTCT AAAGGATTTGTTTTGACATATTTTCTACTGTTATATTGATGAACATATGGAATCTTTGCCTGGTGTGTGCTGAGAAAAGA AGTCTGATGTGAAGATCTTCGTTTTATTTTGATTAAAATTCATGTCAATAATGTGAACTAGTATTAAGAACTATGGCTCT TATAGTTTTGTAATACAACTGAAATTTCTATTTTCTGAATCATTATCATATCACTTTGCAAGTATTTCATGTCTTCTGTT TCTCCACTCAGTTGCATTAACACTTATTGGAGGTGTGCAACATGTCGATGCTTCTGGAACAAGGGTAAGAGGGGAGTCCC ACTTACTCTTGGTTGGTGATCCTGGTAAGCAATCCCCTGCTATTACTATTTCTACTGTCACCCTCACTATGACTATTGCT ACTATTACTTGAAGTTTGTAACCTTGATTATCATTTAATACTTGATAATATTACAATCCGTCCTACCAACCCTGAAAGTG ACATGAAATATACAGAAAAAAGAGGCAGCCTCTATCTGATGATGATATGACAAAAATATTATGGTGTAGCCTTGTATGCT TACTAATTGCTTTCGTTTTTGGTGCTTCAGTTATGCACAACTACGTGTTTAGTAATTTTATGTTATCAAATTTCTGTATA CTAGTAAACTGCTGTTAAAAAATGGATAATGCTTTGCCTTGTGACTTGAGTATGTGTTTCTTATCAATCAACTGCAGTTT TCTTAACTATATATATTGAGTGGTATGTTGCCTTTACTGTCAGTTCTTATCATCAAATGAAAGAAAAAACAAAAGTAGAA AAAGTTTAGTCCTAAATTTCTCTTATTTGTCAGTTGACTCGTTATATGTTTTTTGTAGGAACTGGGAAATCTCAGTTTCT GAAATTTGCTGCAAAATTAAGCAACCGATCTGTTATTACCACTGGGTTGGGAAGCACAAGTGCAGGATTGACTGTTACTG CTGTGAGGGATGGAGGTAGGTTTAATTCAGTCACAGCAACAGATCATCATTCATGCCTTAGTAGAAGTGTTTCTATCTAT TTGTATCAAATATTTGCATATTACTCAAAGTCTTCGTTTCTGTTAAATTTTCCTCTTGCTATTAAAAGTTTGTCAAAATG ATCTTTAGTGAAATGTTTAGATTTCCCTTATTTGATGAAATTATGTTCAAATTGCATGTGCAGCCCTAAATTCTGTTGAA TGCTTTTTTTAACGCGAATATGAAGAAATTGCTACTCTTTTTCATTCAGTTTACGTGAACATGCCTCTCATGTTGTTTTA AGATTACAAAATAAGGACGGAATTGATTGTTAAAGTTGCAAACTTAAAATCTAGCATTTCAAGTGGACTTCAACTTAATC AGACATAATTTTAATTTTTTAAGCAAGTACAAATTTCAACATGCATAGAATCATAGATCTGCATACCTTTAGTCAGTTAT ACTAAGTGCACGGCCAATTTGTGGAATCTGTAGGCGAGTGGATGTTGGAAGCTGGAGCCCTTGTCTTGGCAGATGGAGGC TTGTGTTGCATAGATGAGTTTGACAGGTAAGCTCGAGTGTGATGCTTTGATTTTGAATTTTTTCTGTAGGTTTGGTCTTT GACCAAATGTTGTGTGTGGCCAAGTATTACCTCGGTTGTGGAGCTGCAAATCAAAACAAATAAAAAAAGATATTCATAGT TGGAGGTTTAGGTTAGAAAATGCAGAAAGTGTTAGTAAGAGCTACAAATCATTTTCTTTTGGCTTTTATTTTATTTTATT TAATGATAGGATGTTTGTTTCTCCGCAAAAATATGCTTTAATTTCAGGAGTGCCCCAATGGGTGTTATCCTCTCGATTAT CTGTGAATTGATAATAAAACCTCAGTCTGCAATAAGAGAACATCCTTTGTTTTAAGGAGAATTCTAATTGCACTAAATTT ATCCCATTTTGAACTTGACAAGATTTACATTAAATTGATTCTACTTCTCCACTGCCTCACAACGTCCATATGCTTAAGTT GGTCTAGGCAGTTTTCATTAAACGCTCTAAGGAAAGCTGATTTAATGGAAACTCCGGAAGAGTTGTTTATGATTCTTTAA CATGCCGGCATTGGGTATGAAACTAGTGTTCTTTTTGGCAGTATGAGGGAACATGACAGAGCAACAATACATGAAGCCAT GGAGCAGCAGACAATAAGTGTTGCCAAGGTAGAATATTTGAATATTATGCAAAATCTGAATGAACTTCAGCTTTCTTCAA TCTTCGAAACAGAAGTAAACTTACATTGGCTGGTTTATGGTAAAAAAAAGTTTGGCTACTGATTAACTCTCACTTTATCC AGGCTGGTCTTGTAACAACACTCAGCACTAAAACTACAGTATTTGGCGCTACAAATCCTAAGGGACAATATGATCCTGAT CAACGTATCCCTTTAGTCAATGTACATTTGTTTAATACTATTCAAACCTGGTGTCAAATTATGGTTTCTGTTACTCTTAA TGTTAAGAATAACTGCACCGTCAATATATCAACAGCAGTGGTAGCTGCATAATGTCTGAAATAGTTTACTGTTGCTTCCG TTCAATACTTGTCTGACTTAACACGAAGGAAGCTCTGTCCGTCAATACAACACTCTCTGGTCCTTTGTTAAGCAGGTTTG ATATTGTCCTTGTGCTCTTGGATACAAAGAATCCTGAATGGGATGTAGTAGTTTCATCTCATATTCTTTCTGAGGTAATG TGAATCCCTCTTCAATGCATACAACTTCATATGGATTAAGATTATAATACCTGTATGAAAACTATATCCAGGCAGAACCT GATAAAACCAACAATGATGAAGATCTAGCAAATATCTGGCCTCTTTCCATACTCAAGAGGTAAAGTATGAAGCTAAAGGT CATGGCTATTGGCTAACCTGACTCTGTAGAAAAATGAAGTAAAAACTTAAACCGGTGTTACACTTTTGGGTGCGTCGTCT ATTTTGTTTTTATCATATTTGAACATTGGCAGAAAATTAGGAATCTAGAATTTAGATTTAATTTCTCTTCTCTAACTTGA TTTTGAGCCCCATAGCTTCATGATTATGGTTGCATTTTGAAGCTGCAGCTGCTCATAATTTTAGGATTACTTTAGTCCCC CAATGTTTTGACGTTATTTGAAGAATAACTTGCATATGTGATTCCTTTTTTTCTTTTGGTAGCAAGATGAGCCATTTTTT TCCATGAACAAGTAATGAAAATATAGTGGAATCAGTTATGTGACAATTTCAATTTCCAACGAGTTCCTTTTATCCTATAG AATGCTTTTTAAAACAGATCTATTTTTTTCCAATTTTCTTAAAGACTCTTTGTTACTTACATTAGTGAAAAACAATTCTG CAGGTATATACACTATGTGAAAGCAAAATTCAGACCCGTCCTTACAAGAGAGGCTGAAATAGTTATATCCAGCTATTATC AACTTCAAAGGAAATCTGCAACTGATAATGCAGGTTTGACCTAGAAACGTTTATTTCTAATTTGAGCCTAATGCTCAATA TATGTCATTTTATTTAGTATCGAATTCGCAATGTAGCTAGGACAACTGTGCGCATGCTGGAAAGTTTGATACGCCTAGCT CAAGGTATGTATGCGACTGGCACTGGGTGAATCTTCTCTTTTCAACTTCCTGGTCAATTTTCCTACTACTCATTTGTGCT TTTACTCTTTACTTGTCGCAGCTCACGCGAGACTAATGTTCAGAAATGAGGTGACTCGACTAGATGCGATCACGGCTATT TTATGCATAGAATCCTCCATGACAACCTCAGCTATTGTGGATTGCATTGGGAATGCCCTGCATTCCAATTTTACTGAAAA TCCTGATCAGGAATGTATCCTTGCTATCTTTCTTTCTTTGCATCATGTAGCTTTACATAAATTTTTGCAACAACAACAAT CAAGCCTTATCCTAGTAATTGGGGTGGAATACATGGATCAATTAACGCCATTGGGCACTATTAA
CDS sequence (LotjaGi6g1v0351000.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCCAGCTACCTCGTCCGCCACCATCCCGATCAGCTCAACTCCATTGCTTCTTCTCCCGATCCCAACATTCATTACCC TCTTCACATCGATTTCGCTGAGTTGATGGAAGATGATCATCGCATTGCCCATCTCCTCTTTGCCCAACCCAACACCTACC TGCAAATCTTCGATGACGCTGCTCTCTGGGCTCATAAAATTGTATTGGGAGATATGGAGGAAGGGGTTGAGAAAAAATTC ATTCATGTTCGCGTTAACGTCTGCGGCTCTCCCCTTGAATGCCCTGAGACTTTTCCGAGCATAGGACGTGTTCGAGTGCA GCACCGTGGAATCCTTCTCACTCTCAAAGGGATAGTGATCAGGTCCGGAGCGATCAAGATGCATGAAGGAGAGAGGAAAT ACATGTGTCAAAAATGCCAAAGCAGCTTCCCAGTTTATCCTGAGGTGGAAGCTCGAAACGCCATATCATTACCCTCATTT TGCCCAATTCAGAGGTCTAAGCCCTGTGGAGGTGTAAAATTCCAGTATGTAGAGAATACTATAGTATGTCATGATTATCA GGAGATAAAAATCCAAGAAAGTACACAGGTGCTAGGTGTTGGGGCAATTCCTCGTTCAATTCTTGTCATCTTGAAGGATG ACCTTGTTGATGTTGTTAAAGCTGGAGATGATGTGATTGTCACTGGTCTCTTAACAGCAAAGTGGTCTCCAGAGTTGAAG GATGTGCGCTGTGACCTTGATCCTGTTTTGATAGCCAACAGCATAAGGAGAATCAATGAACTGAAGTCAGAAATTGATAT TTCCGATGATCTTGTTACGAAATTCAAGCAGTTTTGGGATCACTTCAAAGATGCGCCTTTAAAAGGGAGGAATGCCATTC TACGAGCAGTTTGCCCACAAGTATTTGGTCTTTTCACAGTCAAGCTGGCTGTTGCATTAACACTTATTGGAGGTGTGCAA CATGTCGATGCTTCTGGAACAAGGGTAAGAGGGGAGTCCCACTTACTCTTGGTTGGTGATCCTGGAACTGGGAAATCTCA GTTTCTGAAATTTGCTGCAAAATTAAGCAACCGATCTGTTATTACCACTGGGTTGGGAAGCACAAGTGCAGGATTGACTG TTACTGCTGTGAGGGATGGAGGCGAGTGGATGTTGGAAGCTGGAGCCCTTGTCTTGGCAGATGGAGGCTTGTGTTGCATA GATGAGTTTGACAGTATGAGGGAACATGACAGAGCAACAATACATGAAGCCATGGAGCAGCAGACAATAAGTGTTGCCAA GGCTGGTCTTGTAACAACACTCAGCACTAAAACTACAGTATTTGGCGCTACAAATCCTAAGGGACAATATGATCCTGATC AACGAAGCTCTGTCCGTCAATACAACACTCTCTGGTCCTTTGTTAAGCAGGTTTGA
Protein sequence (LotjaGi6g1v0351000.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASYLVRHHPDQLNSIASSPDPNIHYPLHIDFAELMEDDHRIAHLLFAQPNTYLQIFDDAALWAHKIVLGDMEEGVEKKF IHVRVNVCGSPLECPETFPSIGRVRVQHRGILLTLKGIVIRSGAIKMHEGERKYMCQKCQSSFPVYPEVEARNAISLPSF CPIQRSKPCGGVKFQYVENTIVCHDYQEIKIQESTQVLGVGAIPRSILVILKDDLVDVVKAGDDVIVTGLLTAKWSPELK DVRCDLDPVLIANSIRRINELKSEIDISDDLVTKFKQFWDHFKDAPLKGRNAILRAVCPQVFGLFTVKLAVALTLIGGVQ HVDASGTRVRGESHLLLVGDPGTGKSQFLKFAAKLSNRSVITTGLGSTSAGLTVTAVRDGGEWMLEAGALVLADGGLCCI DEFDSMREHDRATIHEAMEQQTISVAKAGLVTTLSTKTTVFGATNPKGQYDPDQRSSVRQYNTLWSFVKQV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 2 | 458 | 457 | 5.6E-201 | – | |
| PANTHER | 2 | 458 | 457 | 5.6E-201 | ||
| SUPERFAMILY | 25 | 239 | 215 | 1.37E-40 | ||
| SMART | 97 | 468 | 372 | 3.9E-25 | ||
| Pfam | 104 | 232 | 129 | 1.2E-22 | ||
| Gene3D | 104 | 249 | 146 | 3.2E-33 | – | |
| Gene3D | 131 | 180 | 50 | 3.2E-33 | – | |
| Gene3D | 285 | 466 | 182 | 3.4E-72 | – | |
| ProSiteProfiles | 289 | 446 | 158 | 54.449 | ||
| Pfam | 291 | 455 | 165 | 2.6E-61 | ||
| CDD | 292 | 458 | 167 | 3.59245E-113 | – | |
| SUPERFAMILY | 299 | 458 | 160 | 1.07E-25 | ||
| PRINTS | 330 | 345 | 16 | 1.7E-20 | ||
| SMART | 331 | 467 | 137 | 6.3E-4 | ||
| PRINTS | 388 | 402 | 15 | 1.7E-20 | ||
| PRINTS | 416 | 429 | 14 | 1.7E-20 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | DNA replication initiation | The process in which DNA-dependent DNA replication is started; this begins with the ATP dependent loading of an initiator complex onto the DNA, this is followed by DNA melting and helicase activity. In bacteria, the gene products that enable the helicase activity are loaded after the initial melting and in archaea and eukaryotes, the gene products that enable the helicase activity are inactive when they are loaded and subsequently activate. |
Expression pattern of LotjaGi6g1v0351000.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…