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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0361000 |
| Transcript ID | LotjaGi6g1v0361000.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Potassium channel; TAIR: AT4G22200.1 potassium transport 2/3; Swiss-Prot: sp|Q38898|AKT2_ARATH Potassium channel AKT2/3; TrEMBL-Plants: tr|G7IPF9|G7IPF9_MEDTR Potassium outward rectifying channel protein; Found in the gene: LotjaGi6g1v0361000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:67298487..67302929) extracted from Lotus japonicus Gifu genome v1.2.
ATGGATGTGGCATCAACCATACCGTATGAGGCAATTGGGTACTTGTTCACTGGAAAACACAAACTCAGTCTCCCTTACTT CCTGCTCGGCATGCTCAGATTGTGGCGGATTAGACGTGTCAAGCAATTCTTTACAAGGTTGCTTCTCTTCCATTCCACTT CACCATTGACTTGCATTGTCTCTTATTAAAATTGATCCAGCTCCACTGATTATTTTTCCAGGCTTGAGAAAGATATCAGG TTCAGCTATTTCTGGGTCCGATGTGCTAGGCTTCTTTCTGTATGTCACATTTTACAACTTCACTAGCAACTACTTCAAAT ATATGTCTGCTATATCTTCTAGTCAAATAATAATTCACTACATTGATGAATAAAACAATTATTTTCAGGGTTTTATTAGG TGCCTAAATATTAGTCAAAATGATAATCACTTTGTGCAATATAGTAACTAGACCAGGTTTAGTTCCACGTTTGGAAGTGT TAGCATTGATTTTTTACTGTTTGAATCAATGTTTAGGTGTTTAGATGGTCAATTCATAATTGGTTCTAACCCCAATATCA ATACTGGAATAAGCTACAAACCCTAGCTTCTGCAATGTACATAAATTTGCGAGATTTCACAATGCTAGTACTCTATAGAA ATCACTTTTCTTTTCTTGTAAATGTACCTAAACATAAATCACAAGAAGGGTATGCAATTTTTTTTTGAAAATATAGCTTA GAATCTGATTTTCATTTTATAGAGGAACTCTTGCAATAATTAATTTTATTTTATCCAAATCAATTCCTGTGCTTCTGGTG CAGGTAACACTTTTTTCAGTTCATTGTGCTGGGTGTCTATATTACCTGCTAGCTGAGTACTACCCCCACCAAGGAAAGAC ATGGATTGGAGCTGCGTTCCCAAACTTCCGAGAGACGAGCCTTCGGGTCAGATACATTTCAGCTATCTACTGGTCCATCA CCACCATGACTACAGTAGGTTATGGTGACCTCCATGCTGTGAACACCATGGAAATGATCTTCATTATTTTCTACATGCTC TTCAACCTTGGTCTAACTGCTTACTTGATTGGTAACATGACAAATCTTGTTGTTGAAGGAACTCGCCGTACCATGGAATT TGTAAGTATTAATGCTTCACATACATGTGACTTTTCTTGGGGTCACCTTGGTGATACAAACTTTAGAACATGTACTATGT AAGTAGTTTATGTAGGTTATGGTTACCAAGAGTTGGAGATTTTGTCCTCCTATCTGCTATTCATAATTTGGAAAGGCGTC TACTTCCAGCACGTTTGAATCACTTTTAATCATCTAAGAATCACTTCTCCTTCCACAAAGCTACTCTTATAGCATGTTTG ATTCTGCGATGGGAAGCCCCATAATCACTTATGAGAAGAAGCTATGGAACTACACCAATCCAAACATGCTATTAGTAGTT TCTCTTAAAATCACTTCTCCTTTAAATGTGGAAACCTACTTGATTTCCAAACACACAATTAGGGTCTTGGCTTTCTACAG TAAATTATAAGTAACTGTGAGTCTGTGACTATTGCCTCATATAAAGAACTTAATGTCATTGTCTATTGCATGACTGATGC AGAGAAATAGTATTGAAGCAGCATCGAACTTTGTGTGTCGAAATCGGTTGCCTCCAAGGTTAAAAGAGCAGATCCTGGGG TACATGTGTCTAAGATTTAAGGCAGAGAGCTTGAATCAGCATCGCCTTATCGAACAGCTACCAAAGTCTATTTGCAAAAG CATCTGCCAGCATTTGTTTTTCCCAACTGTAGAGAAAGTCTATCTCTTCAAAGGAGTCTCAAAAGAAATTCTTGTGTCCC TTGTAAGAAACTAAACTTTGATTCTAACAATTGTTTGGACCCAAATTAATCATAGATCCCGTTTGTATGCATACCCAAGA GTACTTATTGGAGTTTATCTACTAGTAAAAGCATTGGATAGGATGTGATACATTCTCTTTGGTCCACATCCAAACGGACT CATCATAGTACAAGTAAATTGACAGGATAATTTGTGAATGTACAGGTTGCAAAAATGAAGGCAGAGTACATACCCCCTAG AGAGGATGTTATCATGCAAAATGAAGCACCAGATGATGTTTACATTGTAGTGTCTGGAGAAGTGGAAATCATTGATAATG TAATGGAAAGAGAGAGAATTTTAGGGACTTTACAAACAGAAGACATGTTTGGAGAAGTTGGTGCACTTTGTTGCAGACCT CAGAACTTTACCTACAGAACCAAGACTCTCACACAGCTCCTGAGGCTGAAAACCAGTGTTCTTATAGAAGCAATGCAAAT TAAAAAAGAAGACAACATACAAATACTCAAAAATTTCCTTCAGGTAGGGTATACTACTATCTTTGGCTTATTGGTCATAT GCTTCAGGTTCTGAAACTTATAGTGCATGTGATGCAAATGCAGCATTTCAAGCAGCTTAAGGATCTCAGTATCAGAGACT TGATGGTGGAGAATGTGGAAGAAGAGGACCCTAACATGGCTGTGAACTTGTTAACTGTGGCCTCCACAGGCAATGCTGCT TTTCTTGAGGAGCTTCTGAGAGCAGGTTTGGATCCAGACATTGGAGACTCCAAAGGGAAAACCCCCTTGGTAAGTTCATC TCTAATATTCAGACTCTTAAAATCAAATTAAAAAATTACACTCATTTTGTAAGCATTTTAAAATCGATCCTGCATCTCTG TTATCAATCTCATGGACTTTTTCTTCTATTTCTCTTTGAATTTTTACCTGATAGTTTAACCTTTTAAAATGAATGTTTCT TTACTTTACTAATGATCATAACAACTTTAAAACTAGTAAGAATAAGCTACAATTATTTATCAAAACTAACAAGTTGTTAA TTGTTATGCAGCACATAGCAGCATCAAATGGGCATGAAGAGTGTGTTAGAGTCTTACTCAGGCACACATGCAACATACAT ATAAGAGGTACAATATATGTATTCCACTATTCCCTTTCTTACACATACTTTCCAATGAAATTTTCTTGATTATATTTCGA GTGAATATTCAATTTTGTCTCTGATAAATATAGGGTCAGACAATTTAGCCTTTGAAAGATATAAATTGTTATTCCATCCC TAAAATGTAACTTGAGTTCAATTTAGTCCCTGGGAAATGTGATCAAATTAATCTCTTGAAGATGTAAAGGTCTATCAGTG TTAACCCTGAATGGACTAAATTGAATCATTTTCTACCTTTTAAGGATGAAAATGACAATTTCCATCTTTAGGGACTAAAA TGAACTAGAGTAACCAAATATTCAGTTATATTTCACATTCCTGAAGTGATTTGTATTCCAATTGGTGTCAGATATCAATG ATGACACAGCAATATGGGATGCTATAGCATCAAAACACTACTCCATATTCCGGATCCTCTACCAGCTAGCTGCTCTCTCT GATCCACACACAGCAGGCAATCTCCTATGTACAGCAGCAAAAAGAAATGATTTAATAGTCATGAATGAGCTTTTGAAGCA AGGACTAAACATTGATTCGAAAGATCGCCGTGGTAACACAGCTATCCAAATTGCCATGACAGAAAATCATGTAGACATGG TTCAGTTGCTTGTCATGAACGGCGCAGATGTCTCGGATGTGCATACTAATGAATTTTCTGCATACACGTTAAATGAAATG CTGCAGAAGCGTGAAGTTGGACACCTAATTAATGTAAATGAGGCCATGTCCAGTGAGGATGTATTGAAGGGGCAACAATA TCAAGAAGAGAAGGAGCATATTAGGGGAAGATCTAATGGACTAGTATGTCCAAGAGTAAGCATATATAGAGGTCACCCTG TAGTGAAAAGAGAAAGAGGTGTAATGGAAGCTGGGAAACTAATAAGGTTGCCTGATTCATTAGAGGAGCTCAAAACTATT GCAGGTAAAATTTCAAATCTCCACAATTTAGTACTTACATTATGAAAAATTTCCAGTTATCAAACCCTTTTGTTCTTAAG TGGTTGTTAGATTCGGGTTCCCTGCTATCAGAGCAATCCTACATTCACGTCGCAGTCAAGTAATCTCAACCGATAGATCA GTAAAATCGGGAGACAAAGATAAGCTTAAAATTTTATCTGTCCAATCTTAGATCAAACGGTTCATATTCCTTAATTGAGT GATTTAGGACTCACTTGACTGCAGACCATCCAAATACATTGTTGTCTATATTATCCACCAAAATAAGTTCTCTAGTTATT ATTCTGCTTATTGTTTGAGAAAGAAAATTTTCAGGTTTTAGTACCCCCATTAAAATTATATCTTCATTTGGTATATCTTC AACAGGTGAAAAATTTGGATTTGATGCAAGGGATGCAATGGTGACAAATGATGAAGGAGCAGAAATAGACTGTATTGATG TGATCAGAGATAATGATAAAGTTTATATTTTTGAATAGGTTAG
CDS sequence (LotjaGi6g1v0361000.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATGTGGCATCAACCATACCGTATGAGGCAATTGGGTACTTGTTCACTGGAAAACACAAACTCAGTCTCCCTTACTT CCTGCTCGGCATGCTCAGATTGTGGCGGATTAGACGTGTCAAGCAATTCTTTACAAGGCTTGAGAAAGATATCAGGTTCA GCTATTTCTGGGTCCGATGTGCTAGGCTTCTTTCTGTAACACTTTTTTCAGTTCATTGTGCTGGGTGTCTATATTACCTG CTAGCTGAGTACTACCCCCACCAAGGAAAGACATGGATTGGAGCTGCGTTCCCAAACTTCCGAGAGACGAGCCTTCGGGT CAGATACATTTCAGCTATCTACTGGTCCATCACCACCATGACTACAGTAGGTTATGGTGACCTCCATGCTGTGAACACCA TGGAAATGATCTTCATTATTTTCTACATGCTCTTCAACCTTGGTCTAACTGCTTACTTGATTGGTAACATGACAAATCTT GTTGTTGAAGGAACTCGCCGTACCATGGAATTTAGAAATAGTATTGAAGCAGCATCGAACTTTGTGTGTCGAAATCGGTT GCCTCCAAGGTTAAAAGAGCAGATCCTGGGGTACATGTGTCTAAGATTTAAGGCAGAGAGCTTGAATCAGCATCGCCTTA TCGAACAGCTACCAAAGTCTATTTGCAAAAGCATCTGCCAGCATTTGTTTTTCCCAACTGTAGAGAAAGTCTATCTCTTC AAAGGAGTCTCAAAAGAAATTCTTGTGTCCCTTGTTGCAAAAATGAAGGCAGAGTACATACCCCCTAGAGAGGATGTTAT CATGCAAAATGAAGCACCAGATGATGTTTACATTGTAGTGTCTGGAGAAGTGGAAATCATTGATAATGTAATGGAAAGAG AGAGAATTTTAGGGACTTTACAAACAGAAGACATGTTTGGAGAAGTTGGTGCACTTTGTTGCAGACCTCAGAACTTTACC TACAGAACCAAGACTCTCACACAGCTCCTGAGGCTGAAAACCAGTGTTCTTATAGAAGCAATGCAAATTAAAAAAGAAGA CAACATACAAATACTCAAAAATTTCCTTCAGCATTTCAAGCAGCTTAAGGATCTCAGTATCAGAGACTTGATGGTGGAGA ATGTGGAAGAAGAGGACCCTAACATGGCTGTGAACTTGTTAACTGTGGCCTCCACAGGCAATGCTGCTTTTCTTGAGGAG CTTCTGAGAGCAGGTTTGGATCCAGACATTGGAGACTCCAAAGGGAAAACCCCCTTGCACATAGCAGCATCAAATGGGCA TGAAGAGTGTGTTAGAGTCTTACTCAGGCACACATGCAACATACATATAAGAGATATCAATGATGACACAGCAATATGGG ATGCTATAGCATCAAAACACTACTCCATATTCCGGATCCTCTACCAGCTAGCTGCTCTCTCTGATCCACACACAGCAGGC AATCTCCTATGTACAGCAGCAAAAAGAAATGATTTAATAGTCATGAATGAGCTTTTGAAGCAAGGACTAAACATTGATTC GAAAGATCGCCGTGGTAACACAGCTATCCAAATTGCCATGACAGAAAATCATGTAGACATGGTTCAGTTGCTTGTCATGA ACGGCGCAGATGTCTCGGATGTGCATACTAATGAATTTTCTGCATACACGTTAAATGAAATGCTGCAGAAGCGTGAAGTT GGACACCTAATTAATGTAAATGAGGCCATGTCCAGTGAGGATGTATTGAAGGGGCAACAATATCAAGAAGAGAAGGAGCA TATTAGGGGAAGATCTAATGGACTAGTATGTCCAAGAGTAAGCATATATAGAGGTCACCCTGTAGTGAAAAGAGAAAGAG GTGTAATGGAAGCTGGGAAACTAATAAGGTTGCCTGATTCATTAGAGGAGCTCAAAACTATTGCAGGTGAAAAATTTGGA TTTGATGCAAGGGATGCAATGGTGACAAATGATGAAGGAGCAGAAATAGACTGTATTGATGTGATCAGAGATAATGATAA AGTTTATATTTTTGAATAG
Protein sequence (LotjaGi6g1v0361000.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDVASTIPYEAIGYLFTGKHKLSLPYFLLGMLRLWRIRRVKQFFTRLEKDIRFSYFWVRCARLLSVTLFSVHCAGCLYYL LAEYYPHQGKTWIGAAFPNFRETSLRVRYISAIYWSITTMTTVGYGDLHAVNTMEMIFIIFYMLFNLGLTAYLIGNMTNL VVEGTRRTMEFRNSIEAASNFVCRNRLPPRLKEQILGYMCLRFKAESLNQHRLIEQLPKSICKSICQHLFFPTVEKVYLF KGVSKEILVSLVAKMKAEYIPPREDVIMQNEAPDDVYIVVSGEVEIIDNVMERERILGTLQTEDMFGEVGALCCRPQNFT YRTKTLTQLLRLKTSVLIEAMQIKKEDNIQILKNFLQHFKQLKDLSIRDLMVENVEEEDPNMAVNLLTVASTGNAAFLEE LLRAGLDPDIGDSKGKTPLHIAASNGHEECVRVLLRHTCNIHIRDINDDTAIWDAIASKHYSIFRILYQLAALSDPHTAG NLLCTAAKRNDLIVMNELLKQGLNIDSKDRRGNTAIQIAMTENHVDMVQLLVMNGADVSDVHTNEFSAYTLNEMLQKREV GHLINVNEAMSSEDVLKGQQYQEEKEHIRGRSNGLVCPRVSIYRGHPVVKRERGVMEAGKLIRLPDSLEELKTIAGEKFG FDARDAMVTNDEGAEIDCIDVIRDNDKVYIFE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 671 | 671 | 0.0 | – | |
| PANTHER | 1 | 671 | 671 | 0.0 | – | |
| Phobius | 1 | 11 | 11 | - | – | |
| Phobius | 12 | 35 | 24 | - | – | |
| TMHMM | 15 | 37 | 23 | - | – | |
| Pfam | 24 | 168 | 145 | 3.8E-22 | ||
| SUPERFAMILY | 32 | 199 | 168 | 2.35E-35 | – | |
| Phobius | 36 | 55 | 20 | - | – | |
| Gene3D | 56 | 174 | 119 | 3.0E-18 | – | |
| Phobius | 56 | 81 | 26 | - | – | |
| TMHMM | 60 | 82 | 23 | - | – | |
| Phobius | 82 | 106 | 25 | - | – | |
| Phobius | 107 | 125 | 19 | - | – | |
| PRINTS | 109 | 126 | 18 | 1.2E-5 | ||
| TMHMM | 109 | 131 | 23 | - | – | |
| Phobius | 126 | 136 | 11 | - | – | |
| PRINTS | 135 | 146 | 12 | 1.2E-5 | ||
| Phobius | 137 | 155 | 19 | - | – | |
| TMHMM | 138 | 160 | 23 | - | – | |
| PRINTS | 153 | 162 | 10 | 1.2E-5 | ||
| Phobius | 156 | 672 | 517 | - | – | |
| SUPERFAMILY | 166 | 358 | 193 | 2.26E-37 | ||
| Gene3D | 185 | 364 | 180 | 1.0E-29 | ||
| ProSiteProfiles | 239 | 358 | 120 | 20.846 | ||
| CDD | 239 | 352 | 114 | 5.44858E-23 | ||
| SMART | 239 | 356 | 118 | 4.2E-24 | ||
| Pfam | 259 | 342 | 84 | 7.6E-13 | ||
| SUPERFAMILY | 346 | 551 | 206 | 2.33E-34 | ||
| ProSiteProfiles | 381 | 543 | 163 | 30.953 | ||
| SMART | 381 | 410 | 30 | 990.0 | ||
| Gene3D | 382 | 565 | 184 | 1.6E-40 | ||
| Pfam | 390 | 469 | 80 | 1.1E-12 | ||
| SMART | 414 | 443 | 30 | 2.6E-7 | ||
| ProSiteProfiles | 414 | 446 | 33 | 13.571 | ||
| PRINTS | 415 | 430 | 16 | 1.3E-7 | ||
| SMART | 447 | 478 | 32 | 220.0 | ||
| Pfam | 474 | 539 | 66 | 1.9E-6 | ||
| SMART | 481 | 507 | 27 | 1900.0 | ||
| SMART | 511 | 540 | 30 | 0.0015 | ||
| ProSiteProfiles | 511 | 543 | 33 | 11.3 | ||
| PRINTS | 527 | 541 | 15 | 1.3E-7 | ||
| CDD | 598 | 670 | 73 | 7.94711E-12 | – | |
| Pfam | 599 | 670 | 72 | 5.6E-22 | ||
| ProSiteProfiles | 599 | 672 | 74 | 26.609 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Ion channel activity | Enables the facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism. May be either selective (it enables passage of a specific ion only) or non-selective (it enables passage of two or more ions of same charge but different size). | ||
| Molecular function | Voltage-gated potassium channel activity | Enables the transmembrane transfer of a potassium ion by a voltage-gated channel. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Biological process | Ion transport | The directed movement of charged atoms or small charged molecules into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Biological process | Potassium ion transport | The directed movement of potassium ions (K+) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi6g1v0361000.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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