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| Field | Value |
|---|---|
| Gene ID | Lj1g3v1818790 |
| Transcript ID | Lj1g3v1818790.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: chaperone protein ClpB4, mitochondrial-like [Cicer arietinum] gi|502132470|ref|XP_004501376.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 16 | 16 | – | – | |
| MobiDBLite | 21 | 55 | 35 | – | – | |
| PANTHER | 79 | 972 | 894 | 0 | – | |
| PANTHER | 79 | 972 | 894 | 0 | – | |
| Gene3D | 89 | 234 | 146 | 4.90E-42 | ||
| SUPERFAMILY | 91 | 242 | 152 | 3.63E-37 | ||
| TIGRFAM | 92 | 945 | 854 | 0 | ||
| Pfam | 103 | 154 | 52 | 7.30E-13 | ||
| Pfam | 182 | 231 | 50 | 5.10E-12 | ||
| SUPERFAMILY | 245 | 635 | 391 | 1.83E-99 | ||
| Gene3D | 245 | 424 | 180 | 1.80E-49 | ||
| CDD | 267 | 427 | 161 | 1.38E-24 | – | |
| SMART | 284 | 429 | 146 | 1.60E-10 | ||
| Pfam | 290 | 423 | 134 | 1.10E-13 | ||
| ProSitePatterns | 380 | 392 | 13 | – | ||
| Gene3D | 429 | 512 | 84 | 2.10E-33 | – | |
| Coils | 498 | 518 | 21 | – | – | |
| Coils | 520 | 547 | 28 | – | – | |
| Coils | 558 | 578 | 21 | – | – | |
| Coils | 585 | 619 | 35 | – | – | |
| SUPERFAMILY | 636 | 942 | 307 | 1.47E-79 | ||
| Gene3D | 641 | 811 | 171 | 1.40E-56 | ||
| CDD | 661 | 816 | 156 | 4.64E-19 | – | |
| Pfam | 686 | 855 | 170 | 2.90E-54 | ||
| SMART | 687 | 828 | 142 | 2.30E-11 | ||
| PRINTS | 691 | 709 | 19 | 1.30E-39 | ||
| ProSitePatterns | 721 | 739 | 19 | – | ||
| PRINTS | 736 | 754 | 19 | 1.30E-39 | ||
| PRINTS | 765 | 783 | 19 | 1.30E-39 | ||
| PRINTS | 798 | 812 | 15 | 1.30E-39 | ||
| Gene3D | 843 | 873 | 31 | 1.40E-56 | ||
| SMART | 862 | 956 | 95 | 2.30E-28 | ||
| Pfam | 862 | 942 | 81 | 4.20E-22 | ||
| Gene3D | 874 | 947 | 74 | 1.90E-26 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Cellular component | Cytoplasm | All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures. | ||
| Biological process | Response to heat | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism. | ||
| Biological process | Protein refolding | The process carried out by a cell that restores the biological activity of an unfolded or misfolded protein, using helper proteins such as chaperones. |
Expression pattern of Lj1g3v1818790.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v1818790.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.