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| Field | Value |
|---|---|
| Gene ID | Lj6g3v2045730 |
| Transcript ID | Lj6g3v2045730.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: DNA repair protein RAD5-like [Cicer arietinum] gi|502077783|ref|XP_004485743.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 23 | 23 | – | – | |
| PANTHER | 15 | 24 | 10 | 0 | – | |
| PANTHER | 15 | 24 | 10 | 0 | – | |
| MobiDBLite | 503 | 533 | 31 | – | – | |
| PANTHER | 551 | 738 | 188 | 0 | – | |
| PANTHER | 551 | 738 | 188 | 0 | – | |
| SUPERFAMILY | 553 | 621 | 69 | 2.42E-43 | ||
| Gene3D | 564 | 614 | 51 | 3.80E-23 | ||
| SMART | 564 | 868 | 305 | 1.40E-27 | ||
| Pfam | 589 | 966 | 378 | 6.80E-67 | ||
| ProSiteProfiles | 641 | 851 | 211 | 12.477 | ||
| Gene3D | 671 | 736 | 66 | 3.80E-23 | ||
| SUPERFAMILY | 676 | 738 | 63 | 2.42E-43 | ||
| CDD | 679 | 833 | 155 | 3.08E-06 | – | |
| MobiDBLite | 746 | 779 | 34 | – | – | |
| Gene3D | 777 | 848 | 72 | 3.80E-23 | ||
| SUPERFAMILY | 788 | 889 | 102 | 2.42E-43 | ||
| PANTHER | 788 | 968 | 181 | 0 | – | |
| PANTHER | 788 | 968 | 181 | 0 | – | |
| SUPERFAMILY | 897 | 977 | 81 | 1.08E-55 | ||
| SUPERFAMILY | 1002 | 1050 | 49 | 5.08E-11 | – | |
| Gene3D | 1003 | 1062 | 60 | 1.30E-09 | ||
| CDD | 1005 | 1049 | 45 | 5.45E-08 | – | |
| SMART | 1005 | 1043 | 39 | 1.70E-04 | ||
| Pfam | 1005 | 1041 | 37 | 2.80E-05 | ||
| ProSiteProfiles | 1005 | 1041 | 37 | 10.453 | ||
| ProSitePatterns | 1020 | 1029 | 10 | – | ||
| PANTHER | 1020 | 1045 | 26 | 0 | – | |
| PANTHER | 1020 | 1045 | 26 | 0 | – | |
| MobiDBLite | 1065 | 1087 | 23 | – | – | |
| PANTHER | 1083 | 1105 | 23 | 0 | – | |
| PANTHER | 1083 | 1105 | 23 | 0 | – | |
| SUPERFAMILY | 1084 | 1108 | 25 | 1.08E-55 | ||
| ProSiteProfiles | 1153 | 1312 | 160 | 15.2 | ||
| Gene3D | 1156 | 1291 | 136 | 9.60E-16 | ||
| PANTHER | 1160 | 1317 | 158 | 0 | – | |
| Pfam | 1160 | 1259 | 100 | 4.60E-16 | ||
| PANTHER | 1160 | 1317 | 158 | 0 | – | |
| CDD | 1162 | 1267 | 106 | 9.65E-23 | – | |
| SUPERFAMILY | 1163 | 1316 | 154 | 1.08E-55 | ||
| SMART | 1176 | 1259 | 84 | 9.60E-19 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Molecular function | Metal ion binding | Interacting selectively and non-covalently with any metal ion. |
Expression pattern of Lj6g3v2045730.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v2045730.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.