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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0446600 |
| Transcript ID | LotjaGi1g1v0446600.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Leucine-rich repeat receptor-like protein kinase; TAIR: AT1G67510.1 Leucine-rich repeat protein kinase family protein; Swiss-Prot: sp|Q9ZU46|ZAR1_ARATH Receptor protein kinase-like protein ZAR1; TrEMBL-Plants: tr|G7KTA0|G7KTA0_MEDTR Receptor-like kinase; Found in the gene: LotjaGi1g1v0446600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:94546795..94552066) extracted from Lotus japonicus Gifu genome v1.2.
CAAACATTATTTCAATATTGGAATAGAAACCCAACAGAATCCTAAATCCATTGATCCCATCTTAAGTTGCACCCAAAGAG AGAAAGATCCTTTTGTTTCTCTGTCTCAATTACCTCTTGCTTCTCTTTCACTTCACTTCACTTCACTCTACTCCTTCTGT TAACTAACAACTCTCTCTCAAACTCTATAGATCTTTTTGGCGGGAATTGGACCCCACAAAATTAAAATCTCATCCTCCCC AACTCTTAGATATCTTTTCTTCCATAAATACAACAACTTCCCCTCTTTCTTAATAATCCTCCTCAACCATTTCCATTCCA ACCTCTTTTTCCATTCTCTCCCACAACTGCACCAAACGCACCGTACCATCCATAACAACAAACCACCCAAAACGGTGCCG TATTTCTAATCCTAAATGCACTTCACTCTCTTCATCCTCCTTTTCTTCTTCCACTTCCACCGGACTGTTTCACTTACCTC CGACGGCCTCGCCCTTCTCACTCTAAAATCCGCCGTCGACGGCGTCAGCGCCGCCGCATTCTCCGACTGGAACGATGCCG ACGCAAATCCCTGCCGGTGGTCCGGCATCAGCTGCGGCAACATCTCCGGTGACTCTGACCCCCGCGTCGTCGGCGTCGCC CTCGCCGGCAAGGGCCTCCGCGGCTATCTCCCGTCGGAGCTTGGCAACCTCCTCTACCTCCGCCGCCTGAGCCTCCACAC CAACGCCTTCCACGGCTCCATCCCCTCCCAGCTCTTCAACGCCGCCGCGCTCCACAGCGTCTTCCTCCACGGTAACAACC TCTCCGGCGAACTTCCACCTTCCGTCTTCGACCTCCCTCACCTCCAGAATCTTGACCTCTCCGACAACTCCCTCTCTGGC AACATCCCAAACTCCCTCTCCAACTGCTCCCAGCTCCAGCGGCTCGTCCTCGCCCGCAACAAATTCTCCGGTGAGATCCC GGCGACTCCCTGGCCGGCGCTGAAGATCCTCGTCCAGCTCGACCTCTCCGGGAACCATCTCAAAGGTCCGATCCCGGACC AAATCGGTGACCTCACCTCCCTCGCCGGAACCCTAAACCTCTCCTTCAACCACCTAACCGGTAAACTCCCAAATTCCCTC GGGAAATTGCCTGTATCCGTGAGCTTCGATCTTCGCAACAACGACCTCGCCGGCGAGATCCCTCAAACGGGGTCGTTTTC GAATCAGGGACCCACCGCATTCCTCAACAACCCGAACCTCTGCGGGTTCCCTCTGCAGAAACCCTGCAGCGGTTCAGCGC CGAGCGAACCGGGCGCGAATCCCGGTGCGTCTCGGCCAACCGGGAAGCGGTCCAGCAAGGGATTGAGCCCTGGCTTGATT ATTCTGATTACAGTTGCTGATGCTGCTGTTGTGGCTTTGATTGGGCTTGTAGTGGTTTATATTTATTGGAAGAAGAAGGA CAAGTCCAATGGGTGTAGTTGCACTGGAAAAAGCAAGTTTGGTAGTAGTGGTAATGGGGAAGATGAGAAATCAAGGTTGT GTTGTTTTTGTGGGTCTTTGAATGGGTTCAGGAGTGATGATTCTGAAATGGAGGAGGGTGAGAAAGGGGGAGAGGATGAG AGAGTTGAAGGGGAGGGGGGGCATTTGGTGGCAATTGATAAGGGCTTCAACTTTGAGCTTGATGAGCTTTTAAGAGCTTC TGCTTATGTGTTGGGGAAGAGTGGGTTGGGGATTGTGTATAAAGTTGTGCTAGGGAATGGGGTGCCTGTGGCTGTGAGGA GATTAGGGGAGGGTGGGGAACAGAGGTATAAGGAGTTTGCTGCTGAGGTTCAAGCTATTGGGAAAGTGAAACACCCTAAC ATTGTTAAGTTGAGAGCTTATTATTGGGCTCCTGATGAGAAGCTTTTGATCAGTGATTTCATCTCGAATGGCAATTTGGC CACTGCCCTTAGAGGTCAGTTCTTTCACATTTTGATCCTGTGTTCCTTCCTTCTTTTGGTCAGTGATTTCATTTGTTGCA TTTAGTGATAAGTAGTAACCTCTATTTCTACCCTTACTATACATATTAGAGTAGCAGGCTTGGGGGGTAAGGGTGTACAC AAACAGAGTGATGACAATTTCCACCAAAAATTTAGTGATGATTAGTAATGAGAGTTGAATAGGAGTGATTGCAAAATATT AATCATGACAGCTAATGTTAACAGGAAATAACGTGCATCTCTGGTTATATAAATAGAAACATTTTAGGAGGATGTTATCA ATTAGTACAAGAAGAAAATTGTCTAGAGTAGTTCTTCTGTCTGATTTTATGTTTTGTTTGTTTGATAATTTGATTGGTTC TTGTCCTTTTTACTTTTATAATTCAGCCCAGAAAACGAAAACAATTGTTGTGCTATCTAGAAAGGATGGGTTACCAGTTA TACTAAATTTAATATTCATTTTAAAATAGTTGATAGCAAAAATTGGTTTTGTAGTCCTGTCTTTTTCAATTGTTTCTATT TTTGAATATGATTGTCGTTTCCGTTATTGATTTGTGGGACAATGGGACCGCCAACATGGTTGGTTAAATGGCGTAAATGT GCAATATTCAATGGAGTATGTTTTTAAAATTAATTTGAGGGTTGAGTGTTGCTTGCTAGGTGAGCACTTATTAGCTGCTT ATTTATTATTGGTAAAAGCATTGGATCAAGAAAATGTTTGGTGAGACAACAATGCTAATATAAATGAGCGTCCTTTGGGT ACTTCAGACGAGAAAAACAGGACATTCACCATGTGTGTGGGAAACGAGATGGCAGTGGTTCTCATGTTTGGGACCATGAT CTTCTAGATCTCTCATTCTCAGCACATGGGGTCACTAACCAAACCTAAATTTTAGGTGGAAATATTGCAGTTTCACACAT CATTGTAGTGTCCGTTTGACTTTTATAAATGTACTCCATGTATTTTTTAATAAGGGCAAAGGACAAACATCATGCTATAG AGTTCCCGCAATGCGCATGAGATCTAAGGAGGGGCCGGACCACTTTATGGATCTAATGTAGGTAGCTTTACCTTGCATTT TTGCAAGAGACTGATTTTATGTCTCGAATATGTGACTGCAAAGTCATATGGCAGCAACCTTATCGTTGTGCCGAGACTTT TCCTCATGTATTTTATGTAAGAGTGAAAATCTTAGATGAAAATGTGAATATATTTTTAAGAGATAATGTTTTTTTATATC ATTGTATGGTTAAAATTTCTCATTACTCAGCCTGTATTCATCCTCTATAGTATATTAGAAGTTGTTTTGGATATCCTCCT TTATATGTGTATTTTCAGGTCACTATAATGGTATCTTTTAAAGTAGCTTTGTATAAAGTGTGTTGTGTTTGTAGGCTAAA AAACAGCTTTCAAGTTTGAGCCGCTTTTGTGACTTTATTTCTTTCAGCTAAAGCTAAAAACTTCCTGGTTTTTGTTATTT TTAGTTGAACTTCCTACTTCTTAAACTGCTGGTGAAAAAAATTGCTTTTCCCTTTTCCATTATTTATCCTTTTCGCTAAA CTTTCTTGCTTCTGAAGCAGTACCAGCTCCACAATCTCTTGATCAAGCCTGGGCCCTACTATAACTGTTTTCCTACCTTC CTTGCTTCTCTTGCTTTTATGTTTGACTATTGTGATGTGTTAATGTGGGATTATTATAATTTTGTATTTGAAATTATTTA TATAATATTTTAAATTGTTATATTTGGCTTTATTAATTTCAAGGACATATCATATATCATCAAATTGTATAATTTTGTTT GTGTAAAGTATGAAGTGCATAAATCTGTAATTGCAAGTAAAGCAACTCAATCATATAAATTTATTTGATGTGAGGGTTGT GACGGTGGATGACCTGTAAGTACCTCTATAAGTGACCTATGATCCCGGAGGCATGCCCCTGGCCCGCGGTGGTGGCCAGA GGTGAAACCCGGCAAACTTATTCTATTCATCAAAAAAAGGTTGCATAGTTCATATTTAATCCCAATCGCTTATGCAGGGA GAAATGGCCAACCATCTCCAAATCTTTCATGGTCAACCAGGCTGAGAATAGCCAAAGGAACAGCAAGGGGTTTGGCATAC CTCCATGAATGCAGTCCAAGAAAATTTGTTCATGGCGACATCAAACCCTCCAATATCCTGCTTGACACAGACTTCCAACC CCATCTTTCCGATTTCGGTCTCAACCGGCTGATCAGCATCACCGGAAATAACCCCTCCTCAGGCGGCTTCATGGGCGCAG CTCTTCCTTACATAAAGTCCTCACAAACAGAGCGAACTAACAACTACAAAGCCCCTGAAGCTCGAGTCCCGGGCTGCAGA CCCACCCAGAAATGGGATGTGTATTCATTTGGAGTTGTATTGCTCGAATTGCTCACTGGGAAGTCCCCGGATTCTTCTCC CGCAGCATCGACTTCCATGGAAGTCCCTGACTTGGTGAGGTGGGTAAGGAAAGGGTTTGAGCTAGAAAGCCCTTTGTCTG AAATGGTTGATCCATCGCTTCTCCAAGAAGTTCATGCCAAGAAAGAGGTACTAGCTGTGTTTCACGTAGCAATGTCATGC ACAGAAGGAGACCCTGAGGTTCGTCCTAAAATGAAAGCTGTCTCTGAAAATCTTGAAAGAATTTGAACATGGTATTCTAA TTTATACCAGCTGATCAAGGAATAAGCCTGAGGCTGGAATTTCTGTGATGCACGCAATGAAAGATGCATCTCAGTCCCAT GATGCATTTCTGTGGTAGCATTCAGAAGATTTTCTTGTAGGGGTATCAAGGTGGTGTTGCAAATATTTCCTTCCATCTTG GACTAGGCCCTTAACTTCTGATTTGAAGTCAAAGCAATTTTTTGACAGCCGTTCTCACCTCAATTTTATACTCTTGGGTA AAGATGAAGAAAGTTAATGTTACATTTTGTTCTGATCTCATCATCCCACAAAATCTTATTACAATAATTTGATTAATTTC ACATTATCTTGTGCTATTACTTGGGTTGGCAAATCCAGATGTAATCTAGTGTATATTTTTTTATTTTTTTATTTCACTTT ATTATGAATGGCAAGTTGGCAACTCATTGACTATTGAGCCAGAAAAGGAACATGTTACTTGTATTAATGGGGTCTCTGGA TGATTTTTGTAGGGGTTGTTTAAATCACCACCCCTATCTCAAACCCCACCACCCGATCAGAGTAATTTCCTACAATAACC TCGTTTAAATTATTTTCTAGAAATTAAAATCTAGAACACATTCACTTTTATGTACCAGAAATAAGAATCAGG
CDS sequence (LotjaGi1g1v0446600.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCACTTCACTCTCTTCATCCTCCTTTTCTTCTTCCACTTCCACCGGACTGTTTCACTTACCTCCGACGGCCTCGCCCT TCTCACTCTAAAATCCGCCGTCGACGGCGTCAGCGCCGCCGCATTCTCCGACTGGAACGATGCCGACGCAAATCCCTGCC GGTGGTCCGGCATCAGCTGCGGCAACATCTCCGGTGACTCTGACCCCCGCGTCGTCGGCGTCGCCCTCGCCGGCAAGGGC CTCCGCGGCTATCTCCCGTCGGAGCTTGGCAACCTCCTCTACCTCCGCCGCCTGAGCCTCCACACCAACGCCTTCCACGG CTCCATCCCCTCCCAGCTCTTCAACGCCGCCGCGCTCCACAGCGTCTTCCTCCACGGTAACAACCTCTCCGGCGAACTTC CACCTTCCGTCTTCGACCTCCCTCACCTCCAGAATCTTGACCTCTCCGACAACTCCCTCTCTGGCAACATCCCAAACTCC CTCTCCAACTGCTCCCAGCTCCAGCGGCTCGTCCTCGCCCGCAACAAATTCTCCGGTGAGATCCCGGCGACTCCCTGGCC GGCGCTGAAGATCCTCGTCCAGCTCGACCTCTCCGGGAACCATCTCAAAGGTCCGATCCCGGACCAAATCGGTGACCTCA CCTCCCTCGCCGGAACCCTAAACCTCTCCTTCAACCACCTAACCGGTAAACTCCCAAATTCCCTCGGGAAATTGCCTGTA TCCGTGAGCTTCGATCTTCGCAACAACGACCTCGCCGGCGAGATCCCTCAAACGGGGTCGTTTTCGAATCAGGGACCCAC CGCATTCCTCAACAACCCGAACCTCTGCGGGTTCCCTCTGCAGAAACCCTGCAGCGGTTCAGCGCCGAGCGAACCGGGCG CGAATCCCGGTGCGTCTCGGCCAACCGGGAAGCGGTCCAGCAAGGGATTGAGCCCTGGCTTGATTATTCTGATTACAGTT GCTGATGCTGCTGTTGTGGCTTTGATTGGGCTTGTAGTGGTTTATATTTATTGGAAGAAGAAGGACAAGTCCAATGGGTG TAGTTGCACTGGAAAAAGCAAGTTTGGTAGTAGTGGTAATGGGGAAGATGAGAAATCAAGGTTGTGTTGTTTTTGTGGGT CTTTGAATGGGTTCAGGAGTGATGATTCTGAAATGGAGGAGGGTGAGAAAGGGGGAGAGGATGAGAGAGTTGAAGGGGAG GGGGGGCATTTGGTGGCAATTGATAAGGGCTTCAACTTTGAGCTTGATGAGCTTTTAAGAGCTTCTGCTTATGTGTTGGG GAAGAGTGGGTTGGGGATTGTGTATAAAGTTGTGCTAGGGAATGGGGTGCCTGTGGCTGTGAGGAGATTAGGGGAGGGTG GGGAACAGAGGTATAAGGAGTTTGCTGCTGAGGTTCAAGCTATTGGGAAAGTGAAACACCCTAACATTGTTAAGTTGAGA GCTTATTATTGGGCTCCTGATGAGAAGCTTTTGATCAGTGATTTCATCTCGAATGGCAATTTGGCCACTGCCCTTAGAGG TCAGTTCTTTCACATTTTGATCCTGTGTTCCTTCCTTCTTTTGGTCAGTGATTTCATTTGTTGCATTTAG
Protein sequence (LotjaGi1g1v0446600.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MHFTLFILLFFFHFHRTVSLTSDGLALLTLKSAVDGVSAAAFSDWNDADANPCRWSGISCGNISGDSDPRVVGVALAGKG LRGYLPSELGNLLYLRRLSLHTNAFHGSIPSQLFNAAALHSVFLHGNNLSGELPPSVFDLPHLQNLDLSDNSLSGNIPNS LSNCSQLQRLVLARNKFSGEIPATPWPALKILVQLDLSGNHLKGPIPDQIGDLTSLAGTLNLSFNHLTGKLPNSLGKLPV SVSFDLRNNDLAGEIPQTGSFSNQGPTAFLNNPNLCGFPLQKPCSGSAPSEPGANPGASRPTGKRSSKGLSPGLIILITV ADAAVVALIGLVVVYIYWKKKDKSNGCSCTGKSKFGSSGNGEDEKSRLCCFCGSLNGFRSDDSEMEEGEKGGEDERVEGE GGHLVAIDKGFNFELDELLRASAYVLGKSGLGIVYKVVLGNGVPVAVRRLGEGGEQRYKEFAAEVQAIGKVKHPNIVKLR AYYWAPDEKLLISDFISNGNLATALRGQFFHILILCSFLLLVSDFICCI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 2 | 2 | - | – | |
| Phobius | 1 | 19 | 19 | - | – | |
| SignalP_EUK | 1 | 19 | 19 | - | – | |
| Phobius | 3 | 14 | 12 | - | – | |
| PANTHER | 3 | 511 | 509 | 4.1E-217 | – | |
| PANTHER | 3 | 511 | 509 | 4.1E-217 | – | |
| Phobius | 15 | 19 | 5 | - | – | |
| Gene3D | 16 | 185 | 170 | 2.1E-45 | ||
| Phobius | 20 | 313 | 294 | - | – | |
| SUPERFAMILY | 22 | 281 | 260 | 1.08E-47 | – | |
| Pfam | 22 | 60 | 39 | 1.4E-9 | ||
| Pfam | 119 | 177 | 59 | 6.8E-8 | ||
| ProSiteProfiles | 142 | 164 | 23 | 7.104 | ||
| Gene3D | 186 | 291 | 106 | 3.7E-23 | ||
| ProSiteProfiles | 191 | 213 | 23 | 5.117 | ||
| ProSiteProfiles | 215 | 239 | 25 | 5.148 | ||
| Pfam | 219 | 238 | 20 | 0.36 | ||
| MobiDBLite | 286 | 307 | 22 | - | – | |
| Pfam | 306 | 340 | 35 | 3.2E-5 | ||
| Phobius | 314 | 338 | 25 | - | – | |
| TMHMM | 314 | 336 | 23 | - | – | |
| Phobius | 339 | 508 | 170 | - | – | |
| ProSiteProfiles | 420 | 529 | 110 | 11.143 | ||
| SUPERFAMILY | 425 | 518 | 94 | 4.04E-17 | ||
| Pfam | 426 | 508 | 83 | 4.3E-7 | ||
| Gene3D | 426 | 497 | 72 | 2.2E-17 | – | |
| Phobius | 509 | 526 | 18 | - | – | |
| TMHMM | 509 | 526 | 18 | - | – | |
| Phobius | 527 | 529 | 3 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). | ||
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Cellular component | Nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. | ||
| Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi1g1v0446600.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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