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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0375900 |
| Transcript ID | LotjaGi2g1v0375900.6 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | ATP-dependent zinc metalloprotease FTSH protein; TAIR: AT1G07510.1 FTSH protease 10; Swiss-Prot: sp|Q0DHL4|FTSH8_ORYSJ ATP-dependent zinc metalloprotease FTSH 8, mitochondrial; TrEMBL-Plants: tr|A0A1J7GZI6|A0A1J7GZI6_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0375900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:87333637..87337959) extracted from Lotus japonicus Gifu genome v1.2.
TATCTTGAAATAAAAGGGAACCACTAGCAAAGTTTAACACTTGAACTCTCCTTTTGATTTCAGATCATGGAAATTCTCGA AAGGTTTTAACTGTCTCAGTATTGGTGATAGCCTCATTATTGGTGATAGGGCTATTTTTTGTGCCTTTTTCTTTTGGTCC TGACAAGGAGGTAAGAATAACTTAAAGTGAATTACCAGGCAAATTGTTTTAATTTTTTTTTATGTGGGTGAAGTTGGGTT GAGTTGAGAACTTGAGATATGATTTCAAATGCATGAGAAGTGAACCTTGTGCTGCCATGATGAATGCGGAAATTGGTAGT ACAAAAGAGATTATGTTAAACTGGATTTGAGTCTTATATAATTTATAATAATACTGCACTGGCTTAGACCTAGGGGAGCT TTGGTATAACGGCTGATTTTTTTGAAATTAGCACTTTGTAAATGCAAGTTAAGGCTGCCTATTTTAGACTCACAACAGGT TCAGCTCTTCCCTGGAGCCTGCCATGGCTGGTGTGCTTTGTTTGTTTAGTATTTTGTCTATTGCTTACTTGGGTAACTCT TGTGATTTCTTTCCTTCTTGCTCGTCTGTATCCATAGGTGTTTGTATATAACTTGAGTCTTTTCCCTCTGTATCCATAGG TGTTTGTATATAACTTGAGTCTTTTCCCTCCCTTTCATTAGCTTTTTCGTGAAGCTGCATTTATGGATAAATTTAAACTC ATGCGTTACTCTTTTCATTTTTATTTGGCTTAAGTCACTATTGACTTTTATTTGTGGTTTAAAATGTGTATGTCTTTGAG TTAAGCTTTATGCTGCTGTCATCTACTGCTTTTGTTGAAGATCCATAAAAAAAGTTGTTATTAGGATATATTTGAGATTT TTATATCCCACTGATTTCTAGCATCTGGTAGTCTTAAACTAGCTTGAGTTTTGACCATTGCTTTACATTTCTCTATATTA TATTTATTCTGAGGGTATCTTTGTATGATAATTGGGATGTGAATCTGATCACATGCCTTTTGGCAATGTGATACCTTTCT TCTGTGTTTGGATATTTTTGGTTTCTTTTTCAATGCCATCATCTTGCTGACTTGGAACAGAATTCGATTCTTTGCAGATT AGCTTTCAGGAGTTTAGAAATAAACTATTGGAACCAGGGTTAGTAGACCACATTGTTGTCTCAAAGAACTTAGTTGCCGA AATATATGTACGGAGCTCTCCCCGTGATCAAACTGACAATGAAGTAGTCCAAGGGACATTCTCTCCAAAGGGATCTGGAG GTCAATACAAATATTATTTCAATATTGGAAGTATTGAGTCTTTTGAGAAGAAGTTAAAGGAAGCACAAGAGGAACTAGGC ATTGACCATCATGATTATGTACCTGTTACATATTCTTCTGAAATCGTTTGGTACCTGGAGTTAATGCGATTGGCTCCAGA ATTGTTGGTTTCAGTATCTTTCGTATATCTGGTGAGAAGACTACATGGATTTGGTGGTGCCAATATTACTAAAGTAGACA AAAATGCCAAAATCAAGGTCAGTAGCTTTCTTATTTGTCTATGATGGTTATTGTGTTTAAGAACTTGCTCCATAGTTGCC ATCATTGCCTTTCCCACTTTCTCATTGTAGTTTTCTCTTTCAGGGAGTATATGTAGTATGGGTGAATAACTTGTAATAAG TTCATTTAAGAGACTATATTTTTTATTATTTATATTCATTTGGCCAGGTCTATTTCAAAGATGTTGCGGGCTGTGATGAG GCAAAGCAAGAAATTATGGAGTTTGTCCACTTCCTAAAGAACCCAAAAAAATATGAAGAACTTGGTGCGAAAATTCCAAA AGGTGCTCTTCTGGTTGGTCCTCCCGGCACAGGGAAAACCCTTTTAGCAAAAGCAACTGCCGGGGAGTCTGGTGTGCCAT TTCTTTCTATATCTGGTTCTGATTTCACGGAAATGTTTATTGGTGTCGGACCATCTAGGGTGAGAAGCTTGTTTCAGAAA GCAAAGAAGTGTGCTCCCTGTATTATATTTATTGATGAGATTGATGCGATTGGTCGTGCAAGGGGACGTGGAGGTTCCTC TGGGGCAAATGATGAGCGCGAAAGTACTTTAAATCAATTGCTGGTGGAGATGGATGGTTTTGGAACCACAGTTGGAGTTG TTGTGCTGGCAGGAACAAATAGACCTGATATATTAGACAAAGCCCTACTTAGACCTGGGCGATTTGACCGCAAGATAACA ATTGATAAACCTGACATCAAAGGTCGTGACCAGATATTTCAGATCTACTTGAAAAAGATCAAACTTGACCATGAGCCTTC ATATTTTTCAGAAAGGCTTGCAGCCCTTACTCCAGGATTTGCTGGAGCAGAGATTGCTAATGTTTGCAATGAAGCTGCTC TAATTGCTGCAAGAGGTGAAAAAACACAAGTCTCAATGGATCACTTTGAGGCAGCTATTGATAGGATTATTGGTGGTTTG GAGAAGAAAAACAAGGTGTGCCATTTTAAGTTTTTATATTATTATTTAGAAAGGCATAGGAAAGGGGTGGGGTGGGGCTT GGTATTTAAGTTTATAAAAGTTCTGCACGTTATAGGCATAGTTATATGCAATGAATTGAAAGTATTGAACTGAGTTTGGA GCTCTCACTTTGCTTTTTCTTTTCAGTTACTGGTTGAAATTTATCTAATACCCTGTTTCATATCAAGGTAATAAGCAAGC TGGAAAGGCGCACTGTCGCTTACCATGAGTCAGGCCATGCTGTTGCTGGTTGGTTCTTGGAATATGCTGAACCCTTGTTG AAAGTAACTATTGTTCCTCGTGGAACAGCTGCTCTTGGATTTGCGCAGTACGTTCTGAGTGAGAACCTTCTCATGACAAA GGAGCAGCTTTTCGATATGACTTGTATGACCCTTGGTGGTCGGGCTGCAGAGCAGGTTGTCTAGCATTTCCTGTTTTGTT TACTTACTGTTTTCGTCTCCTGTTTTTTCATTAGCACTTTGTTGTATGAGTAATGCTGAATTGCTGATCTTTCTAGTGAA AGGGTTTATTATGATTCAGACTTTTTCACTTTGACTAGTGATATCGCTAAATAAGTCATTATATATGTGGTAGAGCAATC CTCACCTCGACCTTAGCTTTTGGCGTCAAGTTAGGTCTAGCCCGAATTCGAGTATGGTATTAGAGTCTATCCTAGATCTA TTTATTGGAGATCACCCATAAATGAACTACCCATGTTCAGTCTTGCAAACTTCTCGCTCCTAAATTCCAGCCCTTGGTGT GGGGTGTGTTGAGAAATCTCTCATTGACTAGTGATATGAATAAATAAGTCTCTACATAGGATAGAGCATTTCTCACTCTT GAGCTTGTTTTTGGGGTAAAGTAAGACTCAGCCGGAATTCTAATGCAGAGATTTAAGTACATTCCTTATTATATTTCTAA ATTACAAATCTTATTACTGCCTTATTTTATTGTATAATGTTTTTCTCTTATCTGATTCTTCAGCACCTCCAAAGCCAAGA AATGAGAAAATGATTGTTTCCCTCCCTCTTTACTGCAGGTTCTCATTGGGAGAATCTCAACAGGAGCACAGGACGACTTG GAAAAAGTGACCAAGATGACTTATGCTCAAGTGGCAGTCTATGGTTTCAGTGACAAAGTGGGCCTCCTCTCTTTCCCTCA GAGAGAAGACTCATCTGAGATGTTGAAGCCATACAGCAGCAAAACTGCTGCAATCATTGATAGTGAAGTGCGAGAATGGG TGAATAAAGCGTATGAACGTACAATACAGCTAATTGAGGAACACAAGGAACATGTAGCTCAAATTGCAGAGTTGCTGCTT GAAAAAGAGGTACTTCACCAAGATGACTTGGTTCGAGTTTTGGGGGAACGTCCCTTCCAGGCTAGTGAACACACCAGTTA TGATAGGTCAAAGCAAGGTCCCCAAGCGGACGACGAAAAAATCATAGAAAGCACCGTCAATGGGCCTGAGAAGGGTGGTG GGGATTCACCTTTAGATCCCCAGGTAGTCCTGACATGAATAAGTTCATGTTTTTTTAAGTGTACATGAATATCTTTTTTA GCTAAAATTAAAAATTTCATTTAAACTCTAATGGGGTATGCTTTAGAATAGTGACATTGGAAATATTTGAAGGTAGTCTG CAAACAGTGATGCAAATTACACCCAGCTTAAGTAGAAATAGATAGCAAAAACACATCTTTTTGTTTATGTGTTTTAGCTA TTATTTTGTTTTTGTTAATTTGATAACATGGACAAAAATTGTATTATCACTACTAAGTAAATAAAATTCGTTTCTTATTT TTC
CDS sequence (LotjaGi2g1v0375900.6) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCGATTGGCTCCAGAATTGTTGGTTTCAGTATCTTTCGTATATCTGGTGAGAAGACTACATGGATTTGGTGGTGCCAA TATTACTAAAGTAGACAAAAATGCCAAAATCAAGGTCTATTTCAAAGATGTTGCGGGCTGTGATGAGGCAAAGCAAGAAA TTATGGAGTTTGTCCACTTCCTAAAGAACCCAAAAAAATATGAAGAACTTGGTGCGAAAATTCCAAAAGGTGCTCTTCTG GTTGGTCCTCCCGGCACAGGGAAAACCCTTTTAGCAAAAGCAACTGCCGGGGAGTCTGGTGTGCCATTTCTTTCTATATC TGGTTCTGATTTCACGGAAATGTTTATTGGTGTCGGACCATCTAGGGTGAGAAGCTTGTTTCAGAAAGCAAAGAAGTGTG CTCCCTGTATTATATTTATTGATGAGATTGATGCGATTGGTCGTGCAAGGGGACGTGGAGGTTCCTCTGGGGCAAATGAT GAGCGCGAAAGTACTTTAAATCAATTGCTGGTGGAGATGGATGGTTTTGGAACCACAGTTGGAGTTGTTGTGCTGGCAGG AACAAATAGACCTGATATATTAGACAAAGCCCTACTTAGACCTGGGCGATTTGACCGCAAGATAACAATTGATAAACCTG ACATCAAAGGTCGTGACCAGATATTTCAGATCTACTTGAAAAAGATCAAACTTGACCATGAGCCTTCATATTTTTCAGAA AGGCTTGCAGCCCTTACTCCAGGATTTGCTGGAGCAGAGATTGCTAATGTTTGCAATGAAGCTGCTCTAATTGCTGCAAG AGGTGAAAAAACACAAGTCTCAATGGATCACTTTGAGGCAGCTATTGATAGGATTATTGGTGGTTTGGAGAAGAAAAACA AGGTAATAAGCAAGCTGGAAAGGCGCACTGTCGCTTACCATGAGTCAGGCCATGCTGTTGCTGGTTGGTTCTTGGAATAT GCTGAACCCTTGTTGAAAGTAACTATTGTTCCTCGTGGAACAGCTGCTCTTGGATTTGCGCAGTACGTTCTGAGTGAGAA CCTTCTCATGACAAAGGAGCAGCTTTTCGATATGACTTGTATGACCCTTGGTGGTCGGGCTGCAGAGCAGGTTCTCATTG GGAGAATCTCAACAGGAGCACAGGACGACTTGGAAAAAGTGACCAAGATGACTTATGCTCAAGTGGCAGTCTATGGTTTC AGTGACAAAGTGGGCCTCCTCTCTTTCCCTCAGAGAGAAGACTCATCTGAGATGTTGAAGCCATACAGCAGCAAAACTGC TGCAATCATTGATAGTGAAGTGCGAGAATGGGTGAATAAAGCGTATGAACGTACAATACAGCTAATTGAGGAACACAAGG AACATGTAGCTCAAATTGCAGAGTTGCTGCTTGAAAAAGAGGTACTTCACCAAGATGACTTGGTTCGAGTTTTGGGGGAA CGTCCCTTCCAGGCTAGTGAACACACCAGTTATGATAGGTCAAAGCAAGGTCCCCAAGCGGACGACGAAAAAATCATAGA AAGCACCGTCAATGGGCCTGAGAAGGGTGGTGGGGATTCACCTTTAGATCCCCAGGTAGTCCTGACATGA
Protein sequence (LotjaGi2g1v0375900.6) extracted from Lotus japonicus Gifu v1.2 Proteins.
MRLAPELLVSVSFVYLVRRLHGFGGANITKVDKNAKIKVYFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALL VGPPGTGKTLLAKATAGESGVPFLSISGSDFTEMFIGVGPSRVRSLFQKAKKCAPCIIFIDEIDAIGRARGRGGSSGAND ERESTLNQLLVEMDGFGTTVGVVVLAGTNRPDILDKALLRPGRFDRKITIDKPDIKGRDQIFQIYLKKIKLDHEPSYFSE RLAALTPGFAGAEIANVCNEAALIAARGEKTQVSMDHFEAAIDRIIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEY AEPLLKVTIVPRGTAALGFAQYVLSENLLMTKEQLFDMTCMTLGGRAAEQVLIGRISTGAQDDLEKVTKMTYAQVAVYGF SDKVGLLSFPQREDSSEMLKPYSSKTAAIIDSEVREWVNKAYERTIQLIEEHKEHVAQIAELLLEKEVLHQDDLVRVLGE RPFQASEHTSYDRSKQGPQADDEKIIESTVNGPEKGGGDSPLDPQVVLT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Hamap | 1 | 515 | 515 | 30.888 | ||
| Phobius | 1 | 22 | 22 | - | – | |
| Phobius | 1 | 6 | 6 | - | – | |
| Phobius | 7 | 17 | 11 | - | – | |
| Phobius | 18 | 22 | 5 | - | – | |
| TIGRFAM | 18 | 478 | 461 | 6.0E-195 | ||
| PANTHER | 21 | 529 | 509 | 0.0 | – | |
| PANTHER | 21 | 529 | 509 | 0.0 | – | |
| Phobius | 23 | 529 | 507 | - | – | |
| Gene3D | 27 | 213 | 187 | 2.5E-67 | – | |
| SUPERFAMILY | 37 | 285 | 249 | 3.77E-68 | ||
| SMART | 74 | 214 | 141 | 1.6E-20 | ||
| CDD | 75 | 212 | 138 | 1.31161E-26 | – | |
| Pfam | 79 | 211 | 133 | 2.3E-42 | ||
| ProSitePatterns | 182 | 200 | 19 | - | ||
| Gene3D | 214 | 292 | 79 | 2.0E-26 | – | |
| Pfam | 240 | 280 | 41 | 1.6E-12 | ||
| Pfam | 295 | 476 | 182 | 3.2E-63 | ||
| Gene3D | 295 | 496 | 202 | 5.5E-67 | ||
| SUPERFAMILY | 295 | 485 | 191 | 2.09E-61 | ||
| MobiDBLite | 485 | 529 | 45 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Metalloendopeptidase activity | Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Proteolysis | The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
Expression pattern of LotjaGi2g1v0375900.6, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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