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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0375900 |
| Transcript ID | LotjaGi2g1v0375900.2 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | ATP-dependent zinc metalloprotease FTSH protein; TAIR: AT1G07510.1 FTSH protease 10; Swiss-Prot: sp|Q8VZI8|FTSHA_ARATH ATP-dependent zinc metalloprotease FTSH 10, mitochondrial; TrEMBL-Plants: tr|A0A1J7GZI6|A0A1J7GZI6_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0375900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:87326445..87331651) extracted from Lotus japonicus Gifu genome v1.2.
CTAACATCTTAGAATCAAGAACCACATTTTCTTCAAATTCTGATTCTCACTTTCCTGATTTCTCTCCTACCCGCCGTCTG CCACCACCGGCCGATGGCTCAGGAGCCGGGTTCCCCTCCACGCTCTTCCACCTGCAATGTAGGTTCTACAAACCCTAGCG AAGCTCCGAAGAAGAAGCAAAGTAAGTTAGGGTTATATTTTTGGTTCGTAATTTATGTCTAGCGTGATGAACTGGAAACT GTTTCTAATTCTATTGCTCTTAGCAACGAAACTCCAATTCTCCGCATTGCTTCTTGATCACTGCGTTGTGCTTCAGCTAG GTTCCGAACTTCTGATTAGTTTTTATTATAGGCAAATGTTAGTTACTACTAATGTTAGTAAATTAGTTCCTTCACCAGAG TTTGAACCCTGACGCCTGACCCTTCATTCCACCCGGAATGCACTTACATGAAATTCAAGAATAGGACACAACGGACTAAT ACTTGTTTAACTCGTGCATGTTGTGTTTTGGGGATTTTTTTTTATATGTGTTGCAATGCAAAATGTTTTTTCAACATGCG ATGATTTAATTTAATTTGGTCTGTTTGTGTGTCTAGGAATTAATCATGTATTTACTTGGAATAAAAGGCGGACCACTACC AATATTTAACACTTGAACTCTTATTTGGATTTCAGATTCTGAGAAACTCTCCCCTAAGGGGAAGAAGGAAGTCCCAAATG GAAAGAAGAGTATTTTCAAGGAAACTTTCAAGGGAGTTTTCAAGAGAATCAACCTAATATTCAAGCTTAAAGGTAAAAGG ATGTGCTTATTTTCTTATGAACTAGGAAGCTGCCATAGCAAATTATTTGAAAATGGTGGTCATAGCTGATATAATGAGTA ATATAGAGGAATGCCCTTTTCATGACTACATGATATTCAAGTATTGGAGACAACAGACTAATACTTGTTTAACTAGTGTG TGAATGTTTTCCCAGTTGATCTTAGGATAAAAGGGGACCACGACTAACATTTAACACTTACTCTCCTTTGGATTTCAGAT CATGGAAATTTTCGAAAGATTTTAATCGTCTCAGTATTGGTATTATTGCTGATAGGGCTATTTTTGGCGACCTTCTCTTT TGGTCCTGACGAGGAGGTAAGAATAATAATACAAAAGAGATTATGTTAACCTATTTTTGAGTCTTACATAATTTATTATA ATAATACGCTTAAACCTAGGGGTGCTTTGGTGTAACGGTGGAAGTTGTTGAAATTAGCATTTTGTAACTGCAAGTTAAGG CTGTCTATTTTAGACTTACAACAGGTTCGACCCTTCTCTGGATCCTGCCATGGCTGGTGCACTTTATTTGTTTAATATCT CCTCTAGTGCTTACTTGGGTAACTCTTATGATTTATTTCCTTCTTTTGTATATAACTGGAGTCCTTTTCCTTCCTTTTCA TTAACTTTTACACGAAGCTGCATTAATGGATAAATTTCGACTCATACTTTACTCGATAAATATTTATTTGATTAAATCCA CTGTTGACTTCGATTTTGTTGTTGAAAATGTGTGTATATCTGTCAGTTAAGCTTTATGCTGCTGTCATTGACCGCTTTAG TTGAAGCTCCATTAAAAAGGTTGTTATTAGGATATATCTGAGATTTTTATATCTCACTGATTTCTAGCATCTGATTCAAG TCTTAGCCTAGCTTGAGTTTTGAAGATTGCTTGACATTTCTTTATATCTTATTCGTTCTCTGGGTATCTTTGTATGATAA TTGGGATGTAAATCTAATTCCAATCACATGTCTTTTGGCAATGGGATACCTTTCTTCTGTGTTGTGCTGGATATTTTTGG TTTCTTTTTCTTTGTCATCATCTTGCTGACTTGGACTAGAATTTGACTCTTTGCAGGTTAGCTTTAAGGAGTTCCGATAT AAACTATTGGAACCAGGATTAGTTGACCATATTGTTGTCTCAAAAATAAAATTAGTTGCCAAAATTTATGTAAGGAGCTC TCCCCATGAAATGGTCCAAGGGAACCTAACTTCAGAGGGATCTAGAGGCCAATACAAATATTTTTTCAATATTGGAAGTA TTGAGTCTTTTGAGGCGAAGTTAAAGGAAGCACAAGAAGCACTAGGCATTGACCATCATGATTATGTACCTGTTACATAT TCTTCTGATATGGTTTGGGTCATGGGGTTGGTGACACTCGCTTCAACACTGTTGCTTTCGGCATCTTTTCTTTATAGGGT AGGAAGACTAAATGGGTTTCGTGTTGCCCATGTTTCTAAAGTAGATAAAAGTGCCAAAAACAAGGTCAGTTGCTTTCTTA TTTTTCTATGTTGGTTATTGTGTTTAAGAGCTTGCTCCATAGTTGCCATCATTGCCTTTCGGATTATAGTTTTCTCTTTC CAATTGGTAATTAATAAGTTCATTAAAGAGACTATATTTTTCATTATTTATATTATTCATTTGGTAAGGTCTATTTCAAA GATGTTGCGGGGTGTGATGAGGCAAAGCAAGAAATTATGGAGTTTGTCCACTTCCTCAAGAACCCAAAAAAATATGAAGA ACTTGGTGCAAAAATTCCAAAAGGTGCTCTTCTGGTCGGTCCTCCAGGCACAGGAAAAACCCTTTTAGCAAAAGCAACTG CAGGAGAGTCTGCTGTACCATTTTTTCCTATATCTGGTTCTGATTTCACGGAAATTTTTGTTGGTGTCGGGGCATCTAGG GTGAGAAACTTGTTTCAGGAAGCAAGGCAGTGTGCTCCCAGTATAATATTTATTGATGAGATTGATGCAATTGGTCGAGC AAGGGGACGTGGAGGTTTCTCTTACTCTGCAGCAAATAATGAGCGTGAAAATACTTTAAATCAATTGTTGGTGGAGATGG ATGGTTTTGGAACAACTACTGGAGTTGTTGTGCTGGCTGGAACAAATAGACCTGATATATTAGACAAAGCCCTACTTAGA CCTGGGAGATTTGATCGCCAGATTTCCATTGATAAACCTGATATTAAAGGTCGTGACCAGATATTTCAGATATACTTGAA AAAGATTAAACTTGACCATGAGCCTTCATATTTTTCACAAAGACTTGCAGCCCTTACTCCAGGATTTGCTGGAGCCGACA TTGCTAATGTTTGCAATGAAGCTGCTCTGATTGCTGCAAGGGGTGACAAAACACAAGTCACAATGGACCATTTTGAGGCA GCTATTGATAAGATCATTGGTGGTTTGGAGAAGAAGAACAAGGTATGCCATTTTTTGTTTTAATATTAATATTTAGAAAG ATCTAGCCTATAGGAAATGGGCGGGCTAGAAGTTCTGTACACTAGGCATAGTTGTAGCCTTCATTTTTTCCATATTACAT TTATTTCATCATCATTGTGAGCAAAATGAATCTTTAGCAGATAATATTGTTCATTTATTTTAGTAAATATCGTTCCACAT GATATTTGGTTATTTACGATGGAGAATGATAATGTTCCTGAGTAGACCGTCCATTATACCCCAAATCTTCTAGTCTATCT GTGTATCTAATCTGCAGAAATAGTTGTTCTTTGGCTGTTGTTGCAATTTAAGACTTCATGATATATGATGAAGACTATAG GCTGCAATGAATTGAAAGTATTGAACTGAGTTTGGAGCTCTCACTTTGCTTTTTTTCAGTTACTAGTTAAAGTTTATCTA ATACCCTGTTTCATATCAAGGTAATAAGCAAGCTGGAAAGGCGTACTGTCGCTTACCATGAGTCAGGCCATGCTGTTGCA GGTTGGTTCTTGGAACATTCTGAACCCTTGTTGAAAGTAACTATTGTTCCTCGTGGAACAGCTGCTCTTGGATTTGCGCA GTATGTTCTGAGTGAGAACCTTCTCATGACAAAGGAGCAGCTTTTCGATATGACTTGTATGACCCTTGGTGGTCGGGCTG CAGAGCAGGTTGTATAGCATTTCCTATTTTGTTTACTTACTGTTTTTGTCTTCTGTTTTTTCATTAGCTCTTTGTTGTAT GAGTAATGCTGAATTACTGATCTTTCTAGTTAAAGGGTGTAATATGATTCAGACTTTTTTTTTCACATTGATTAGCTAGT GATATCGCTTAATAAGTCATTATATATGGTAGAGCATGCCTCACCTTGACCTTAGCTTTTGGTCTTTGGGGATAAGTTAG GTCTAGCCCGAATTCAAATACGGTATCAAGATCTCCTAGATCTATTTATTGGAGATCACCCATAAATGAACTACCCATGT TTAGTATTGCAAACTTCTCGCTCCAAATTTCCAGCCCTTGACATTAGTGATATAAATAAATAAGTCTCTACATAGGATAG AGCATTTCTCACTCCTGAGCTTGTTTTAAGGGTAAAGTAACGCTCAGCCCGAATTCTAATGCAGATATAAGTACATTCCT TATTATATTTCTAAATTACAAATCTTATTACTGCCTTATTTTATTGTATAATGTTTTTCTCTTATCTGATTCTTCAGCAC CTCCAAAGCCTAGAAATGAGAAAATGATTGTTTCCCTCCCTCGTTACTGCAGGTTCTCATAGGGAGAATCTCAACTGGAG CACAGGACGACTTGGAAAAAGTGACCAAGATGACTTATGCTCAAGTGGCCGTCTATGGTTTCAGTGACAAAGTGGGCCTC CTCTCTTTCCCTTCAAGAGAAGACTCATATGAGATGTCGAAGCCTTACAGCAGCAAAACTGCTGCAATCATTGATAATGA AGTGCGACAATTGGTGAACAAAGCGTATGAACGTACAATACAGCTAATTGAGGAACACAAGGAGCATGTAGCTCAAATTG CAGAGTTGCTGCTTGAAAAAGAAGTACTTCACCAAGATGATTTGATTCGAGTTTTGGGAGAGCGTCCCTTCAAGGCTGGT GAACTCACCAATTATGATAGGTCAAAGCAAGGTTTTCAAACGGATGAGGAAAAAATCATAGAAAACACCGTCGATGGGCT TGAGGAGGGTGGTGGGGATTCACTTTAGATCCTCAGGTAGTCCTCACATGGTTGAATAATTTCATGTTTTTCTTTTCCAG TGCGCAAGAATATCTTTTTTTTTTGCTAAAATCAATACTCCAGACTCCAGTTATACTCATATGGTATGCTTTAGAACTGT CACATGGGAAATATTTAAAGGAAGGTAGTCTGCAAAGTGCAAACAGTGATTTGAATTACACCTGGCTTAAGTAGAAATAG ATAGCAA
CDS sequence (LotjaGi2g1v0375900.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTCAGGAGCCGGGTTCCCCTCCACGCTCTTCCACCTGCAATGTAGGTTCTACAAACCCTAGCGAAGCTCCGAAGAA GAAGCAAAATTCTGAGAAACTCTCCCCTAAGGGGAAGAAGGAAGTCCCAAATGGAAAGAAGAGTATTTTCAAGGAAACTT TCAAGGGAGTTTTCAAGAGAATCAACCTAATATTCAAGCTTAAAGATCATGGAAATTTTCGAAAGATTTTAATCGTCTCA GTATTGGTATTATTGCTGATAGGGCTATTTTTGGCGACCTTCTCTTTTGGTCCTGACGAGGAGGTTAGCTTTAAGGAGTT CCGATATAAACTATTGGAACCAGGATTAGTTGACCATATTGTTGTCTCAAAAATAAAATTAGTTGCCAAAATTTATGTAA GGAGCTCTCCCCATGAAATGGTCCAAGGGAACCTAACTTCAGAGGGATCTAGAGGCCAATACAAATATTTTTTCAATATT GGAAGTATTGAGTCTTTTGAGGCGAAGTTAAAGGAAGCACAAGAAGCACTAGGCATTGACCATCATGATTATGTACCTGT TACATATTCTTCTGATATGGTTTGGGTCATGGGGTTGGTGACACTCGCTTCAACACTGTTGCTTTCGGCATCTTTTCTTT ATAGGGTAGGAAGACTAAATGGGTTTCGTGTTGCCCATGTTTCTAAAGTAGATAAAAGTGCCAAAAACAAGGTCTATTTC AAAGATGTTGCGGGGTGTGATGAGGCAAAGCAAGAAATTATGGAGTTTGTCCACTTCCTCAAGAACCCAAAAAAATATGA AGAACTTGGTGCAAAAATTCCAAAAGGTGCTCTTCTGGTCGGTCCTCCAGGCACAGGAAAAACCCTTTTAGCAAAAGCAA CTGCAGGAGAGTCTGCTGTACCATTTTTTCCTATATCTGGTTCTGATTTCACGGAAATTTTTGTTGGTGTCGGGGCATCT AGGGTGAGAAACTTGTTTCAGGAAGCAAGGCAGTGTGCTCCCAGTATAATATTTATTGATGAGATTGATGCAATTGGTCG AGCAAGGGGACGTGGAGGTTTCTCTTACTCTGCAGCAAATAATGAGCGTGAAAATACTTTAAATCAATTGTTGGTGGAGA TGGATGGTTTTGGAACAACTACTGGAGTTGTTGTGCTGGCTGGAACAAATAGACCTGATATATTAGACAAAGCCCTACTT AGACCTGGGAGATTTGATCGCCAGATTTCCATTGATAAACCTGATATTAAAGGTCGTGACCAGATATTTCAGATATACTT GAAAAAGATTAAACTTGACCATGAGCCTTCATATTTTTCACAAAGACTTGCAGCCCTTACTCCAGGATTTGCTGGAGCCG ACATTGCTAATGTTTGCAATGAAGCTGCTCTGATTGCTGCAAGGGGTGACAAAACACAAGTCACAATGGACCATTTTGAG GCAGCTATTGATAAGATCATTGGTGGTTTGGAGAAGAAGAACAAGGTAATAAGCAAGCTGGAAAGGCGTACTGTCGCTTA CCATGAGTCAGGCCATGCTGTTGCAGGTTGGTTCTTGGAACATTCTGAACCCTTGTTGAAAGTAACTATTGTTCCTCGTG GAACAGCTGCTCTTGGATTTGCGCAGTATGTTCTGAGTGAGAACCTTCTCATGACAAAGGAGCAGCTTTTCGATATGACT TGTATGACCCTTGGTGGTCGGGCTGCAGAGCAGGTTCTCATAGGGAGAATCTCAACTGGAGCACAGGACGACTTGGAAAA AGTGACCAAGATGACTTATGCTCAAGTGGCCGTCTATGGTTTCAGTGACAAAGTGGGCCTCCTCTCTTTCCCTTCAAGAG AAGACTCATATGAGATGTCGAAGCCTTACAGCAGCAAAACTGCTGCAATCATTGATAATGAAGTGCGACAATTGGTGAAC AAAGCGTATGAACGTACAATACAGCTAATTGAGGAACACAAGGAGCATGTAGCTCAAATTGCAGAGTTGCTGCTTGAAAA AGAAGTACTTCACCAAGATGATTTGATTCGAGTTTTGGGAGAGCGTCCCTTCAAGGCTGGTGAACTCACCAATTATGATA GGTCAAAGCAAGGTTTTCAAACGGATGAGGAAAAAATCATAGAAAACACCGTCGATGGGCTTGAGGAGGGTGGTGGGGAT TCACTTTAG
Protein sequence (LotjaGi2g1v0375900.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAQEPGSPPRSSTCNVGSTNPSEAPKKKQNSEKLSPKGKKEVPNGKKSIFKETFKGVFKRINLIFKLKDHGNFRKILIVS VLVLLLIGLFLATFSFGPDEEVSFKEFRYKLLEPGLVDHIVVSKIKLVAKIYVRSSPHEMVQGNLTSEGSRGQYKYFFNI GSIESFEAKLKEAQEALGIDHHDYVPVTYSSDMVWVMGLVTLASTLLLSASFLYRVGRLNGFRVAHVSKVDKSAKNKVYF KDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESAVPFFPISGSDFTEIFVGVGAS RVRNLFQEARQCAPSIIFIDEIDAIGRARGRGGFSYSAANNERENTLNQLLVEMDGFGTTTGVVVLAGTNRPDILDKALL RPGRFDRQISIDKPDIKGRDQIFQIYLKKIKLDHEPSYFSQRLAALTPGFAGADIANVCNEAALIAARGDKTQVTMDHFE AAIDKIIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHSEPLLKVTIVPRGTAALGFAQYVLSENLLMTKEQLFDMT CMTLGGRAAEQVLIGRISTGAQDDLEKVTKMTYAQVAVYGFSDKVGLLSFPSREDSYEMSKPYSSKTAAIIDNEVRQLVN KAYERTIQLIEEHKEHVAQIAELLLEKEVLHQDDLIRVLGERPFKAGELTNYDRSKQGFQTDEEKIIENTVDGLEEGGGD SL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 44 | 44 | - | – | |
| MobiDBLite | 1 | 25 | 25 | - | – | |
| Phobius | 1 | 75 | 75 | - | – | |
| PANTHER | 22 | 714 | 693 | 0.0 | – | |
| PANTHER | 22 | 714 | 693 | 0.0 | – | |
| MobiDBLite | 26 | 44 | 19 | - | – | |
| Hamap | 63 | 704 | 642 | 31.877 | ||
| TMHMM | 76 | 98 | 23 | - | – | |
| Phobius | 76 | 97 | 22 | - | – | |
| Pfam | 78 | 180 | 103 | 4.8E-9 | ||
| Gene3D | 93 | 193 | 101 | 4.8E-23 | – | |
| Phobius | 98 | 192 | 95 | - | – | |
| Phobius | 193 | 214 | 22 | - | – | |
| Phobius | 215 | 722 | 508 | - | – | |
| Gene3D | 227 | 413 | 187 | 4.9E-64 | – | |
| TIGRFAM | 228 | 679 | 452 | 2.9E-195 | ||
| SUPERFAMILY | 237 | 486 | 250 | 5.45E-65 | ||
| SMART | 273 | 415 | 143 | 1.3E-20 | ||
| CDD | 274 | 413 | 140 | 4.87016E-25 | – | |
| Pfam | 278 | 412 | 135 | 3.0E-39 | ||
| ProSitePatterns | 383 | 401 | 19 | - | ||
| Gene3D | 414 | 493 | 80 | 3.5E-27 | – | |
| Pfam | 442 | 481 | 40 | 8.4E-14 | ||
| Gene3D | 496 | 697 | 202 | 1.5E-66 | ||
| SUPERFAMILY | 496 | 685 | 190 | 2.35E-62 | ||
| Pfam | 496 | 677 | 182 | 7.7E-64 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Metalloendopeptidase activity | Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Proteolysis | The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds. | ||
| Molecular function | Zinc ion binding | Interacting selectively and non-covalently with zinc (Zn) ions. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of LotjaGi2g1v0375900.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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