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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR002182
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 683 results. Now displaying 4 of 14 with 50 rows per page. This search has taken 5.783s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0355189.1
n.a. Resistance protein PRG [Medicago truncatula] gi|357499649|ref|XP_003620113.1| chr0 187103042 187105119 +
2 domain predictions
1 GO term
Lj0g3v0357839.1
n.a. NBS-LRR resistance protein [Medicago truncatula] gi|357490823|ref|XP_003615699.1| chr0 188364795 188368046 -
2 domain predictions
1 GO term
Lj0g3v0357849.1
n.a. NBS-LRR resistance protein [Medicago truncatula] gi|357490825|ref|XP_003615700.1| chr0 188364795 188368315 -
2 domain predictions
1 GO term
Lj0g3v0360099.1
n.a. PREDICTED: disease resistance protein RPM1-like isoform X1 [Cicer arietinum] gi|502125327|ref|XP_004498891.1| chr0 189643284 189648854 +
2 domain predictions
1 GO term
Lj0g3v0360099.2
n.a. PREDICTED: disease resistance protein RPM1-like isoform X1 [Cicer arietinum] gi|502125327|ref|XP_004498891.1| chr0 189650259 189654644 +
2 domain predictions
1 GO term
Lj0g3v0362909.2
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356542401|ref|XP_003539655.1| chr0 191393371 191405275 -
2 domain predictions
1 GO term
Lj0g3v0362909.3
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356542401|ref|XP_003539655.1| chr0 191393371 191414853 -
2 domain predictions
1 GO term
Lj0g3v0362909.4
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356542401|ref|XP_003539655.1| chr0 191409964 191414853 -
2 domain predictions
1 GO term
Lj1g3v0604910.1
n.a. PREDICTED: probable disease resistance protein At1g52660-like [Cicer arietinum] gi|502183056|ref|XP_004517051.1| chr1 7727445 7729618 -
2 domain predictions
1 GO term
Lj1g3v0627670.1
n.a. Resistance protein [Medicago truncatula] gi|357486075|ref|XP_003613325.1| chr1 8232399 8233898 +
2 domain predictions
1 GO term
Lj1g3v0627680.3
n.a. n.a. chr1 8238212 8249374 -
2 domain predictions
1 GO term
Lj1g3v0913150.2
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356497765|ref|XP_003517729.1| chr1 11606378 11612816 -
2 domain predictions
1 GO term
Lj1g3v1091410.1
n.a. Cc-nbs-lrr resistance protein [Medicago truncatula] gi|357460487|ref|XP_003600525.1| chr1 13778897 13793906 +
2 domain predictions
1 GO term
Lj1g3v1361010.1
n.a. NBS-LRR resistance-like protein [Medicago truncatula] gi|357521387|ref|XP_003630982.1| chr1 16286486 16294297 -
2 domain predictions
1 GO term
Lj1g3v1361010.2
n.a. NBS-LRR resistance-like protein [Medicago truncatula] gi|357521387|ref|XP_003630982.1| chr1 16286486 16294297 -
2 domain predictions
1 GO term
Lj1g3v1361010.3
n.a. NBS-LRR resistance-like protein [Medicago truncatula] gi|357521387|ref|XP_003630982.1| chr1 16286486 16294297 -
2 domain predictions
1 GO term
Lj1g3v1361010.4
n.a. NBS-LRR resistance-like protein [Medicago truncatula] gi|357521387|ref|XP_003630982.1| chr1 16286719 16294297 -
2 domain predictions
1 GO term
Lj1g3v2012980.1
n.a. Nucleotide binding site leucine-rich repeat disease resistance protein [Medicago truncatula] gi|357463129|ref|XP_003601846.1| chr1 23609326 23633344 -
2 domain predictions
1 GO term
Lj1g3v2012990.1
n.a. n.a. chr1 23610289 23637225 +
2 domain predictions
1 GO term
Lj1g3v2012990.2
n.a. n.a. chr1 23629686 23637225 +
2 domain predictions
1 GO term
Lj1g3v2013000.1
n.a. NBS-LRR resistance protein [Medicago truncatula] gi|357498303|ref|XP_003619440.1| chr1 23639207 23641491 -
2 domain predictions
1 GO term
Lj1g3v2139470.1
n.a. PREDICTED: disease resistance RPP8-like protein 3-like [Glycine max] gi|356496703|ref|XP_003517205.1| chr1 25667085 25670295 +
2 domain predictions
1 GO term
Lj1g3v2415470.1
n.a. TIR-NBS-LRR RCT1-like resistance protein [Medicago sativa] gi|193584702|gb|ACF19651.1| chr1 28332231 28337470 +
2 domain predictions
1 GO term
Lj1g3v2611620.2
n.a. Rpp4 candidate R5 [Glycine max] gi|328447250|gb|AEB06128.1| chr1 30296957 30313182 +
2 domain predictions
1 GO term
Lj1g3v2727080.1
n.a. NBS-containing resistance-like protein [Medicago truncatula] gi|357460983|ref|XP_003600773.1| chr1 31367454 31373834 +
2 domain predictions
1 GO term
Lj1g3v2727110.1
n.a. Cc-nbs resistance protein [Medicago truncatula] gi|357459895|ref|XP_003600228.1| chr1 31376454 31377989 +
2 domain predictions
1 GO term
Lj1g3v3040500.1
n.a. Disease resistance RPP8-like protein [Medicago truncatula] gi|357449695|ref|XP_003595124.1| chr1 34722610 34728797 +
2 domain predictions
1 GO term
Lj1g3v3116520.1
n.a. PREDICTED: probable disease resistance protein At4g27220-like [Glycine max] gi|356567184|ref|XP_003551801.1| chr1 35476539 35478932 +
2 domain predictions
1 GO term
Lj1g3v3170110.1
n.a. PREDICTED: probable disease resistance protein At1g52660-like [Cicer arietinum] gi|502183056|ref|XP_004517051.1| chr1 35927897 35936378 +
2 domain predictions
1 GO term
Lj1g3v3170110.3
n.a. PREDICTED: probable disease resistance protein At1g52660-like [Cicer arietinum] gi|502183056|ref|XP_004517051.1| chr1 35927897 35929940 +
2 domain predictions
1 GO term
Lj1g3v3172190.1
n.a. PREDICTED: probable disease resistance protein At1g52660-like [Cicer arietinum] gi|502183056|ref|XP_004517051.1| chr1 35988045 35990311 +
2 domain predictions
1 GO term
Lj1g3v3194700.1
n.a. Disease resistance-like protein [Medicago truncatula] gi|357486563|ref|XP_003613569.1| chr1 36312398 36317332 +
2 domain predictions
1 GO term
Lj1g3v3217950.1
n.a. TIR-similar-domain-containing protein TSDC [Medicago truncatula] gi|357494551|ref|XP_003617564.1| chr1 36466917 36467606 -
2 domain predictions
1 GO term
Lj1g3v3218140.1
n.a. Heat shock cognate protein 70-1 [Theobroma cacao] gi|508786823|gb|EOY34079.1| chr1 36555030 36560218 -
2 domain predictions
1 GO term
Lj1g3v3218180.2
n.a. n.a. chr1 36567661 36569165 +
2 domain predictions
1 GO term
Lj1g3v3642040.2
n.a. functional candidate resistance protein KR1 [Glycine max] gi|351722733|ref|NP_001237766.1| chr1 41923710 41926609 +
2 domain predictions
1 GO term
Lj1g3v3718130.1
n.a. Cc-nbs-lrr resistance protein [Medicago truncatula] gi|357494411|ref|XP_003617494.1| chr1 42897379 42899490 +
2 domain predictions
1 GO term
Lj1g3v3870650.2
n.a. Resistance protein [Medicago truncatula] gi|357438211|ref|XP_003589381.1| chr1 44425832 44427987 -
2 domain predictions
1 GO term
Lj1g3v3947020.1
n.a. disease resistance protein [Phaseolus vulgaris] gi|74231152|gb|ABA00702.1| chr1 46203538 46206257 -
2 domain predictions
1 GO term
Lj1g3v3947020.2
n.a. disease resistance protein [Phaseolus vulgaris] gi|74231152|gb|ABA00702.1| chr1 46203538 46207937 -
2 domain predictions
1 GO term
Lj1g3v4058580.1
n.a. Rpp4 candidate [Medicago truncatula] gi|357509125|ref|XP_003624851.1| chr1 47924452 47940208 +
2 domain predictions
1 GO term
Lj1g3v4058600.1
n.a. Disease resistance protein [Medicago truncatula] gi|124359532|gb|ABN05954.1| chr1 47930888 47936114 +
2 domain predictions
1 GO term
Lj2g3v0062500.1
n.a. NBS-containing resistance-like protein [Medicago truncatula] gi|357459929|ref|XP_003600246.1| chr2 1341454 1345046 -
2 domain predictions
1 GO term
Lj2g3v0249870.1
n.a. Resistance protein [Medicago truncatula] gi|357518005|ref|XP_003629291.1| chr2 4288430 4290318 -
2 domain predictions
1 GO term
Lj2g3v0582820.1
n.a. PREDICTED: TMV resistance protein N-like [Cicer arietinum] gi|502171572|ref|XP_004515062.1| chr2 7960615 7969284 +
2 domain predictions
1 GO term
Lj2g3v0620850.1
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356573485|ref|XP_003554889.1| chr2 8351378 8354973 -
2 domain predictions
1 GO term
Lj2g3v0620850.2
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356573485|ref|XP_003554889.1| chr2 8351378 8354973 -
2 domain predictions
1 GO term
Lj2g3v0620850.3
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356573485|ref|XP_003554889.1| chr2 8351378 8354973 -
2 domain predictions
1 GO term
Lj2g3v0634890.1
n.a. Disease resistance-like protein [Medicago truncatula] gi|357499675|ref|XP_003620126.1| chr2 9450149 9453460 +
2 domain predictions
1 GO term
Lj2g3v0634990.1
n.a. Resistance protein [Medicago truncatula] gi|357499581|ref|XP_003620079.1| chr2 9506903 9509731 +
2 domain predictions
1 GO term