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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR002182
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 683 results. Now displaying 5 of 14 with 50 rows per page. This search has taken 5.434s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj2g3v0634990.3
n.a. Resistance protein [Medicago truncatula] gi|357499581|ref|XP_003620079.1| chr2 9506903 9509731 +
2 domain predictions
1 GO term
Lj2g3v0635020.1
n.a. Resistance protein [Medicago truncatula] gi|357499581|ref|XP_003620079.1| chr2 9512969 9513542 +
2 domain predictions
1 GO term
Lj2g3v1034750.1
n.a. Cc-nbs-lrr resistance protein [Medicago truncatula] gi|357457471|ref|XP_003599016.1| chr2 16603699 16616375 +
2 domain predictions
1 GO term
Lj2g3v1079450.1
n.a. Cc-nbs-lrr resistance protein [Medicago truncatula] gi|357457471|ref|XP_003599016.1| chr2 17513305 17518928 +
2 domain predictions
1 GO term
Lj2g3v1352610.1
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356497814|ref|XP_003517752.1| chr2 21332419 21334847 +
2 domain predictions
1 GO term
Lj2g3v1353630.1
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356497814|ref|XP_003517752.1| chr2 21342783 21349807 -
2 domain predictions
1 GO term
Lj2g3v1353630.2
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356497814|ref|XP_003517752.1| chr2 21347549 21349807 -
2 domain predictions
1 GO term
Lj2g3v1534060.1
n.a. n.a. chr2 24065009 24074097 +
2 domain predictions
1 GO term
Lj2g3v1534070.1
n.a. PREDICTED: disease resistance protein RPM1-like [Glycine max] gi|356497605|ref|XP_003517650.1| chr2 24070110 24073994 -
2 domain predictions
1 GO term
Lj2g3v1534070.2
n.a. PREDICTED: disease resistance protein RPM1-like [Glycine max] gi|356497605|ref|XP_003517650.1| chr2 24070110 24074087 -
2 domain predictions
1 GO term
Lj2g3v1535100.1
n.a. Disease resistance protein RPP8 [Medicago truncatula] gi|357484807|ref|XP_003612691.1| chr2 24085681 24089424 -
2 domain predictions
1 GO term
Lj2g3v1535110.1
n.a. PREDICTED: disease resistance protein RPM1-like [Cicer arietinum] gi|502162289|ref|XP_004512454.1| chr2 24085858 24089424 -
2 domain predictions
1 GO term
Lj2g3v1536320.1
n.a. NB-LRR type disease resistance protein Rps1-k-2 [Medicago truncatula] gi|357457003|ref|XP_003598782.1| chr2 24188368 24198454 -
2 domain predictions
1 GO term
Lj2g3v1536330.2
n.a. NB-LRR type disease resistance protein Rps1-k-2 [Medicago truncatula] gi|357457003|ref|XP_003598782.1| chr2 24188607 24202153 -
2 domain predictions
1 GO term
Lj2g3v1549570.1
n.a. NB-LRR type disease resistance protein Rps1-k-2 [Medicago truncatula] gi|357457003|ref|XP_003598782.1| chr2 24327316 24332933 +
2 domain predictions
1 GO term
Lj2g3v1728810.1
n.a. PREDICTED: disease resistance RPP8-like protein 3-like [Glycine max] gi|356496703|ref|XP_003517205.1| chr2 26547131 26554873 -
2 domain predictions
1 GO term
Lj2g3v1830940.1
n.a. PREDICTED: probable disease resistance protein At5g66900-like [Cicer arietinum] gi|502160966|ref|XP_004511973.1| chr2 27655374 27660378 +
2 domain predictions
1 GO term
Lj2g3v2002040.1
n.a. Disease resistance-like protein GS0-1 [Medicago truncatula] gi|357494437|ref|XP_003617507.1| chr2 30150966 30153029 +
2 domain predictions
1 GO term
Lj2g3v2051230.1
n.a. Disease resistance-like protein GS0-1 [Medicago truncatula] gi|357494433|ref|XP_003617505.1| chr2 31093944 31097626 -
2 domain predictions
1 GO term
Lj2g3v2233030.1
n.a. Cc-nbs-lrr resistance protein [Medicago truncatula] gi|357490913|ref|XP_003615744.1| chr2 32998196 33001698 +
2 domain predictions
1 GO term
Lj2g3v2256410.1
n.a. Disease resistance-like protein GS3-1 [Medicago truncatula] gi|357515237|ref|XP_003627907.1| chr2 33223507 33223965 +
2 domain predictions
1 GO term
Lj2g3v2899850.1
n.a. NBS-LRR resistance protein [Medicago truncatula] gi|357490923|ref|XP_003615749.1| chr2 37597054 37601510 +
2 domain predictions
1 GO term
Lj2g3v2899850.2
n.a. Cc-nbs-lrr resistance protein [Medicago truncatula] gi|357490913|ref|XP_003615744.1| chr2 37597054 37601510 +
2 domain predictions
1 GO term
Lj2g3v2925200.1
n.a. Cc-nbs-lrr resistance protein [Medicago truncatula] gi|357490913|ref|XP_003615744.1| chr2 38172208 38174504 -
2 domain predictions
1 GO term
Lj2g3v3084010.1
n.a. CCP [Medicago truncatula] gi|357494181|ref|XP_003617379.1| chr2 39582029 39585652 -
2 domain predictions
1 GO term
Lj2g3v3084010.2
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356499336|ref|XP_003518497.1| chr2 39582029 39585652 -
2 domain predictions
1 GO term
Lj2g3v3084230.1
n.a. CCP [Medicago truncatula] gi|357494181|ref|XP_003617379.1| chr2 39613116 39614129 +
2 domain predictions
1 GO term
Lj2g3v3149390.1
n.a. Cc-nbs-lrr resistance protein [Medicago truncatula] gi|357494411|ref|XP_003617494.1| chr2 40683339 40684812 +
2 domain predictions
1 GO term
Lj2g3v3149860.1
n.a. Cc-nbs-lrr resistance protein [Medicago truncatula] gi|357494411|ref|XP_003617494.1| chr2 40695896 40696566 +
2 domain predictions
1 GO term
Lj2g3v3337370.1
n.a. Cc-nbs-lrr resistance protein [Medicago truncatula] gi|357493209|ref|XP_003616893.1| chr2 42341194 42352407 +
2 domain predictions
1 GO term
Lj3g3v0323240.1
n.a. PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like [Glycine max] gi|356557333|ref|XP_003546971.1| chr3 2409210 2418905 +
2 domain predictions
1 GO term
Lj3g3v0323290.1
n.a. Tir-nbs-lrr resistance protein [Medicago truncatula] gi|357454621|ref|XP_003597591.1| chr3 2429168 2435717 -
2 domain predictions
1 GO term
Lj3g3v0323300.1
n.a. Leucine-rich repeat; Leucine-rich [Medicago truncatula] gi|87162712|gb|ABD28507.1| chr3 2433133 2434279 -
2 domain predictions
1 GO term
Lj3g3v0359330.1
n.a. NB-LRR type disease resistance protein Rps1-k-2 [Medicago truncatula] gi|357457003|ref|XP_003598782.1| chr3 2855649 2858433 -
2 domain predictions
1 GO term
Lj3g3v0359340.1
n.a. n.a. chr3 2858869 2871318 +
2 domain predictions
1 GO term
Lj3g3v0423770.1
n.a. tir-nbs-lrr resistance protein [Populus trichocarpa] gi|224133498|ref|XP_002328057.1| chr3 3708632 3709385 +
2 domain predictions
1 GO term
Lj3g3v0423910.1
n.a. PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like [Glycine max] gi|356557333|ref|XP_003546971.1| chr3 3723902 3727146 +
2 domain predictions
1 GO term
Lj3g3v0423950.1
n.a. disease resistance protein [Phaseolus vulgaris] gi|74231152|gb|ABA00702.1| chr3 3731007 3734257 +
2 domain predictions
1 GO term
Lj3g3v0429250.1
n.a. TMV resistance protein N-like [Glycine max] gi|359806248|ref|NP_001241468.1| chr3 4264185 4271632 -
2 domain predictions
1 GO term
Lj3g3v0464890.1
n.a. NBS-containing resistance-like protein [Medicago truncatula] gi|357469529|ref|XP_003605049.1| chr3 5385005 5392901 -
2 domain predictions
1 GO term
Lj3g3v0465900.1
n.a. NBS-containing resistance-like protein [Medicago truncatula] gi|357469529|ref|XP_003605049.1| chr3 5395277 5396711 -
2 domain predictions
1 GO term
Lj3g3v0465910.1
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356542395|ref|XP_003539652.1| chr3 5395277 5398722 -
2 domain predictions
1 GO term
Lj3g3v0740480.1
n.a. PREDICTED: TMV resistance protein N-like isoform X1 [Cicer arietinum] gi|502155881|ref|XP_004510225.1| chr3 8461698 8468097 +
2 domain predictions
1 GO term
Lj3g3v0740480.2
n.a. PREDICTED: TMV resistance protein N-like isoform X1 [Cicer arietinum] gi|502155881|ref|XP_004510225.1| chr3 8461698 8469009 +
2 domain predictions
1 GO term
Lj3g3v0740490.1
n.a. TMV resistance protein N [Medicago truncatula] gi|357513283|ref|XP_003626930.1| chr3 8470026 8474354 +
2 domain predictions
1 GO term
Lj3g3v0740490.2
n.a. PREDICTED: TMV resistance protein N-like isoform X1 [Cicer arietinum] gi|502155881|ref|XP_004510225.1| chr3 8470026 8474354 +
2 domain predictions
1 GO term
Lj3g3v0740500.1
n.a. TMV resistance protein N [Medicago truncatula] gi|357513283|ref|XP_003626930.1| chr3 8470081 8474548 +
2 domain predictions
1 GO term
Lj3g3v0743560.1
n.a. PREDICTED: TMV resistance protein N-like [Cicer arietinum] gi|502155879|ref|XP_004510224.1| chr3 8507651 8515414 -
2 domain predictions
1 GO term
Lj3g3v0743570.1
n.a. n.a. chr3 8508041 8515414 +
2 domain predictions
1 GO term
Lj3g3v0744620.1
n.a. PREDICTED: TMV resistance protein N-like [Cicer arietinum] gi|502155879|ref|XP_004510224.1| chr3 8533343 8535536 +
2 domain predictions
1 GO term