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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR015655
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 272 results. Now displaying 6 of 6 with 50 rows per page. This search has taken 5.370s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi6g1v0130300.1
n.a. Protein phosphatase 2C-like protein; TAIR: AT2G30020.1 Protein phosphatase 2C family protein; Swiss-Prot: sp|O80871|P2C25_ARATH Probable protein phosphatase 2C 25; TrEMBL-Plants: tr|I1MZY0|I1MZY0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0130300 LjG1.1_chr6 35105670 35110055 -
2 domain predictions
2 GO terms
LotjaGi6g1v0208300.1
n.a. Phosphatase 2C family protein; TAIR: AT2G25620.1 DNA-binding protein phosphatase 1; Swiss-Prot: sp|Q69QZ0|P2C27_ORYSJ Probable protein phosphatase 2C 27; TrEMBL-Plants: tr|A0A151R2Q9|A0A151R2Q9_CAJCA Uncharacterized protein; Found in the gene: LotjaGi6g1v0208300 LjG1.1_chr6 50604435 50609807 -
2 domain predictions
2 GO terms
LotjaGi6g1v0208300.2
n.a. Phosphatase 2C family protein; TAIR: AT2G25620.1 DNA-binding protein phosphatase 1; Swiss-Prot: sp|Q69QZ0|P2C27_ORYSJ Probable protein phosphatase 2C 27; TrEMBL-Plants: tr|V7AYQ7|V7AYQ7_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0208300 LjG1.1_chr6 50607138 50608396 -
2 domain predictions
2 GO terms
LotjaGi6g1v0208300.3
n.a. Phosphatase 2C family protein; TAIR: AT2G25620.1 DNA-binding protein phosphatase 1; Swiss-Prot: sp|Q69QZ0|P2C27_ORYSJ Probable protein phosphatase 2C 27; TrEMBL-Plants: tr|A0A151R2Q9|A0A151R2Q9_CAJCA Uncharacterized protein; Found in the gene: LotjaGi6g1v0208300 LjG1.1_chr6 50607138 50608893 -
2 domain predictions
2 GO terms
LotjaGi6g1v0208300.4
n.a. Phosphatase 2C family protein; TAIR: AT2G25620.1 DNA-binding protein phosphatase 1; Swiss-Prot: sp|Q69QZ0|P2C27_ORYSJ Probable protein phosphatase 2C 27; TrEMBL-Plants: tr|A0A151R2Q9|A0A151R2Q9_CAJCA Uncharacterized protein; Found in the gene: LotjaGi6g1v0208300 LjG1.1_chr6 50607138 50609188 -
2 domain predictions
2 GO terms
LotjaGi6g1v0228400.1
n.a. Protein phosphatase 2c, putative; TAIR: AT1G72770.1 HYPERSENSITIVE TO ABA1; Swiss-Prot: sp|Q0JLP9|P2C06_ORYSJ Probable protein phosphatase 2C 6; TrEMBL-Plants: tr|V7B2M7|V7B2M7_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0228400 LjG1.1_chr6 53432319 53439734 -
2 domain predictions
2 GO terms
LotjaGi6g1v0228400.2
n.a. Protein phosphatase 2c, putative; TAIR: AT1G72770.1 HYPERSENSITIVE TO ABA1; Swiss-Prot: sp|Q0JLP9|P2C06_ORYSJ Probable protein phosphatase 2C 6; TrEMBL-Plants: tr|V7B2M7|V7B2M7_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0228400 LjG1.1_chr6 53434833 53439655 -
2 domain predictions
2 GO terms
LotjaGi6g1v0249200.1
n.a. Protein phosphatase 2C-like protein; TAIR: AT3G16560.1 Protein phosphatase 2C family protein; Swiss-Prot: sp|Q9LUS8|P2C40_ARATH Probable protein phosphatase 2C 40; TrEMBL-Plants: tr|I3T7Q6|I3T7Q6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0249200 LjG1.1_chr6 56124831 56129522 -
2 domain predictions
2 GO terms
LotjaGi6g1v0249200.2
n.a. Protein phosphatase 2C-like protein; TAIR: AT3G16560.1 Protein phosphatase 2C family protein; Swiss-Prot: sp|Q9LUS8|P2C40_ARATH Probable protein phosphatase 2C 40; TrEMBL-Plants: tr|I3T7Q6|I3T7Q6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0249200 LjG1.1_chr6 56124838 56128559 -
2 domain predictions
2 GO terms
LotjaGi6g1v0249200.3
n.a. Protein phosphatase 2C-like protein; TAIR: AT3G16560.1 Protein phosphatase 2C family protein; Swiss-Prot: sp|Q9LUS8|P2C40_ARATH Probable protein phosphatase 2C 40; TrEMBL-Plants: tr|I3T7Q6|I3T7Q6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0249200 LjG1.1_chr6 56124904 56129331 -
2 domain predictions
2 GO terms
LotjaGi6g1v0249200.4
n.a. Protein phosphatase 2C-like protein; TAIR: AT3G16560.1 Protein phosphatase 2C family protein; Swiss-Prot: sp|Q9LUS8|P2C40_ARATH Probable protein phosphatase 2C 40; TrEMBL-Plants: tr|I3T7Q6|I3T7Q6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0249200 LjG1.1_chr6 56124930 56128552 -
2 domain predictions
2 GO terms
LotjaGi6g1v0249200.5
n.a. Protein phosphatase 2C-like protein; TAIR: AT3G16560.1 Protein phosphatase 2C family protein; Swiss-Prot: sp|Q9LUS8|P2C40_ARATH Probable protein phosphatase 2C 40; TrEMBL-Plants: tr|I3T7Q6|I3T7Q6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0249200 LjG1.1_chr6 56125171 56127170 -
2 domain predictions
2 GO terms
LotjaGi6g1v0249200.6
n.a. Protein phosphatase 2C-like protein; TAIR: AT3G16560.1 Protein phosphatase 2C family protein; Swiss-Prot: sp|Q9LUS8|P2C40_ARATH Probable protein phosphatase 2C 40; TrEMBL-Plants: tr|I3T7Q6|I3T7Q6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0249200 LjG1.1_chr6 56125171 56127214 -
2 domain predictions
2 GO terms
LotjaGi6g1v0253000.1
n.a. Protein phosphatase 2c, putative; TAIR: AT3G05640.1 Protein phosphatase 2C family protein; Swiss-Prot: sp|Q9M9W9|P2C34_ARATH Probable protein phosphatase 2C 34; TrEMBL-Plants: tr|I3SJT8|I3SJT8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0253000 LjG1.1_chr6 56532270 56535251 +
2 domain predictions
2 GO terms
LotjaGi6g1v0259600.1
n.a. Protein phosphatase 2c, putative; TAIR: AT3G17090.1 Protein phosphatase 2C family protein; Swiss-Prot: sp|Q0V7V2|P2C42_ARATH Probable protein phosphatase 2C 42; TrEMBL-Plants: tr|G7IMT1|G7IMT1_MEDTR Serine/threonine phosphatase family, 2C domain protein; Found in the gene: LotjaGi6g1v0259600 LjG1.1_chr6 57239353 57244656 +
2 domain predictions
2 GO terms
LotjaGi6g1v0259600.2
n.a. Protein phosphatase 2c, putative; TAIR: AT3G17090.1 Protein phosphatase 2C family protein; Swiss-Prot: sp|Q0V7V2|P2C42_ARATH Probable protein phosphatase 2C 42; TrEMBL-Plants: tr|G7IMT1|G7IMT1_MEDTR Serine/threonine phosphatase family, 2C domain protein; Found in the gene: LotjaGi6g1v0259600 LjG1.1_chr6 57239669 57243794 +
2 domain predictions
2 GO terms
LotjaGi6g1v0259600.3
n.a. Protein phosphatase 2c, putative; TAIR: AT3G17090.1 Protein phosphatase 2C family protein; Swiss-Prot: sp|Q0V7V2|P2C42_ARATH Probable protein phosphatase 2C 42; TrEMBL-Plants: tr|G7IMT1|G7IMT1_MEDTR Serine/threonine phosphatase family, 2C domain protein; Found in the gene: LotjaGi6g1v0259600 LjG1.1_chr6 57239669 57243794 +
2 domain predictions
2 GO terms
LotjaGi6g1v0262700.1
n.a. Protein phosphatase 2C-like protein; TAIR: AT1G48040.1 Protein phosphatase 2C family protein; Swiss-Prot: sp|Q9LNF4|P2C13_ARATH Probable protein phosphatase 2C 13; TrEMBL-Plants: tr|G3ECQ8|G3ECQ8_SOYBN Rfls10 protein; Found in the gene: LotjaGi6g1v0262700 LjG1.1_chr6 57618119 57620809 -
2 domain predictions
2 GO terms
LotjaGi6g1v0262700.2
n.a. Protein phosphatase 2C-like protein; TAIR: AT1G48040.1 Protein phosphatase 2C family protein; Swiss-Prot: sp|Q9LNF4|P2C13_ARATH Probable protein phosphatase 2C 13; TrEMBL-Plants: tr|G3ECQ8|G3ECQ8_SOYBN Rfls10 protein; Found in the gene: LotjaGi6g1v0262700 LjG1.1_chr6 57619063 57620231 -
2 domain predictions
2 GO terms
LotjaGi6g1v0262700.3
n.a. Protein phosphatase 2C-like protein; TAIR: AT1G48040.1 Protein phosphatase 2C family protein; Swiss-Prot: sp|Q9LNF4|P2C13_ARATH Probable protein phosphatase 2C 13; TrEMBL-Plants: tr|G3ECQ8|G3ECQ8_SOYBN Rfls10 protein; Found in the gene: LotjaGi6g1v0262700 LjG1.1_chr6 57619063 57620269 -
2 domain predictions
2 GO terms
LotjaGi6g1v0352500.1
n.a. Phosphatase 2C family protein; TAIR: AT1G34750.1 Protein phosphatase 2C family protein; Swiss-Prot: sp|Q9S9Z7|P2C10_ARATH Probable protein phosphatase 2C 10; TrEMBL-Plants: tr|I1KUC9|I1KUC9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0352500 LjG1.1_chr6 66456195 66461257 -
2 domain predictions
2 GO terms
LotjaGi6g1v0352500.2
n.a. Phosphatase 2C family protein; TAIR: AT1G34750.1 Protein phosphatase 2C family protein; Swiss-Prot: sp|Q9S9Z7|P2C10_ARATH Probable protein phosphatase 2C 10; TrEMBL-Plants: tr|A0A151T0P9|A0A151T0P9_CAJCA Uncharacterized protein; Found in the gene: LotjaGi6g1v0352500 LjG1.1_chr6 66456861 66459615 -
2 domain predictions
2 GO terms