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TREX

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

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  • IPR036691
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We have found 161 results. Now displaying 3 of 4 with 50 rows per page. This search has taken 5.484s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
n.a. LINE-1 reverse transcriptase like; TAIR: AT1G43760.1 DNAse I-like superfamily protein; Swiss-Prot: sp|P14381|YTX2_XENLA Transposon TX1 uncharacterized 149 kDa protein; TrEMBL-Plants: tr|A5CA21|A5CA21_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi4g1v0259800_LC LjG1.1_chr4 61616675 61626717 -
n.a. DNAse I-like superfamily protein; TAIR: AT4G30900.1 DNAse I-like superfamily protein; Swiss-Prot: sp|Q5UQW5|YL388_MIMIV Uncharacterized protein L388; TrEMBL-Plants: tr|I1JGP9|I1JGP9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0288000 LjG1.1_chr4 66038485 66043243 +
n.a. DNAse I-like superfamily protein; TAIR: AT4G30900.1 DNAse I-like superfamily protein; Swiss-Prot: sp|Q5UQW5|YL388_MIMIV Uncharacterized protein L388; TrEMBL-Plants: tr|A0A151SFK3|A0A151SFK3_CAJCA Uncharacterized protein; Found in the gene: LotjaGi4g1v0288000 LjG1.1_chr4 66038884 66041744 +
n.a. DNAse I-like superfamily protein; TAIR: AT4G30900.1 DNAse I-like superfamily protein; Swiss-Prot: sp|Q24239|ANGEL_DROME Protein angel; TrEMBL-Plants: tr|A0A0R0F9S5|A0A0R0F9S5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0288000 LjG1.1_chr4 66038884 66042656 +
n.a. DNAse I-like superfamily protein; TAIR: AT4G30900.1 DNAse I-like superfamily protein; Swiss-Prot: sp|Q5UQW5|YL388_MIMIV Uncharacterized protein L388; TrEMBL-Plants: tr|A0A1J7I0C6|A0A1J7I0C6_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0288000 LjG1.1_chr4 66038884 66042656 +
n.a. DNAse I-like superfamily protein; TAIR: AT4G30900.1 DNAse I-like superfamily protein; Swiss-Prot: sp|Q9ULM6|CNOT6_HUMAN CCR4-NOT transcription complex subunit 6; TrEMBL-Plants: tr|I1JGP9|I1JGP9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0288000 LjG1.1_chr4 66041402 66042656 +
n.a. DNase I superfamily protein; TAIR: AT4G30900.1 DNAse I-like superfamily protein; Swiss-Prot: sp|Q9ULM6|CNOT6_HUMAN CCR4-NOT transcription complex subunit 6; TrEMBL-Plants: tr|A0A0R0F973|A0A0R0F973_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0288000 LjG1.1_chr4 66041899 66042656 +
n.a. LINE-1 reverse transcriptase like; TAIR: AT1G43760.1 DNAse I-like superfamily protein; Swiss-Prot: sp|P14381|YTX2_XENLA Transposon TX1 uncharacterized 149 kDa protein; TrEMBL-Plants: tr|F4NCI4|F4NCI4_BETVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0326700_LC LjG1.1_chr4 70496330 70498776 -
n.a. Type I inositol-1,4,5-trisphosphate 5-phosphatase; TAIR: AT2G01900.1 DNAse I-like superfamily protein; Swiss-Prot: sp|Q9SIS4|IP5P9_ARATH Type IV inositol polyphosphate 5-phosphatase 9; TrEMBL-Plants: tr|A0A0S3R141|A0A0S3R141_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0356500 LjG1.1_chr4 73498914 73507313 -
n.a. Type I inositol-1,4,5-trisphosphate 5-phosphatase; TAIR: AT2G01900.1 DNAse I-like superfamily protein; Swiss-Prot: sp|Q9SIS4|IP5P9_ARATH Type IV inositol polyphosphate 5-phosphatase 9; TrEMBL-Plants: tr|A0A0S3R141|A0A0S3R141_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0356500 LjG1.1_chr4 73504177 73507313 -
n.a. Type I inositol-1,4,5-trisphosphate 5-phosphatase; TAIR: AT2G01900.1 DNAse I-like superfamily protein; Swiss-Prot: sp|Q9SIS4|IP5P9_ARATH Type IV inositol polyphosphate 5-phosphatase 9; TrEMBL-Plants: tr|A0A0B2RAB0|A0A0B2RAB0_GLYSO Type I inositol-1,4,5-trisphosphate 5-phosphatase CVP2; Found in the gene: LotjaGi4g1v0356600 LjG1.1_chr4 73514148 73523817 -
n.a. Type I inositol-1,4,5-trisphosphate 5-phosphatase; TAIR: AT2G01900.3 DNAse I-like superfamily protein; Swiss-Prot: sp|Q9SIS4|IP5P9_ARATH Type IV inositol polyphosphate 5-phosphatase 9; TrEMBL-Plants: tr|A0A0B2RAB0|A0A0B2RAB0_GLYSO Type I inositol-1,4,5-trisphosphate 5-phosphatase CVP2; Found in the gene: LotjaGi4g1v0356700_LC LjG1.1_chr4 73535080 73542588 +
n.a. Type I inositol-1,4,5-trisphosphate 5-phosphatase; TAIR: AT2G01900.3 DNAse I-like superfamily protein; Swiss-Prot: sp|Q9SIS4|IP5P9_ARATH Type IV inositol polyphosphate 5-phosphatase 9; TrEMBL-Plants: tr|A0A0B2RAB0|A0A0B2RAB0_GLYSO Type I inositol-1,4,5-trisphosphate 5-phosphatase CVP2; Found in the gene: LotjaGi4g1v0356900 LjG1.1_chr4 73562368 73566187 +
n.a. Type I inositol-1,4,5-trisphosphate 5-phosphatase; TAIR: AT2G01900.1 DNAse I-like superfamily protein; Swiss-Prot: sp|Q9SIS4|IP5P9_ARATH Type IV inositol polyphosphate 5-phosphatase 9; TrEMBL-Plants: tr|A0A0B2RAB0|A0A0B2RAB0_GLYSO Type I inositol-1,4,5-trisphosphate 5-phosphatase CVP2; Found in the gene: LotjaGi4g1v0356900 LjG1.1_chr4 73562496 73566147 +
n.a. Type I inositol-1,4,5-trisphosphate 5-phosphatase; TAIR: AT5G65090.1 DNAse I-like superfamily protein; Swiss-Prot: sp|Q66GQ6|IP5P5_ARATH Type I inositol polyphosphate 5-phosphatase 5; TrEMBL-Plants: tr|D3YBG4|D3YBG4_TRIRP Bristled-like protein; Found in the gene: LotjaGi4g1v0399700 LjG1.1_chr4 77700099 77705145 -
n.a. Type I inositol-1,4,5-trisphosphate 5-phosphatase; TAIR: AT1G47510.1 inositol polyphosphate 5-phosphatase 11; Swiss-Prot: sp|Q5EAF2|IP5PB_ARATH Type IV inositol polyphosphate 5-phosphatase 11; TrEMBL-Plants: tr|K7M5I0|K7M5I0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0019800 LjG1.1_chr5 3749146 3752999 -
n.a. Type I inositol-1,4,5-trisphosphate 5-phosphatase; TAIR: AT1G47510.1 inositol polyphosphate 5-phosphatase 11; Swiss-Prot: sp|Q5EAF2|IP5PB_ARATH Type IV inositol polyphosphate 5-phosphatase 11; TrEMBL-Plants: tr|K7M5H9|K7M5H9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0019800 LjG1.1_chr5 3749146 3752999 -
n.a. Carbon catabolite repressor 4-like protein; TAIR: AT5G11350.1 DNAse I-like superfamily protein; Swiss-Prot: sp|Q8VYU4|CCR4F_ARATH Carbon catabolite repressor protein 4 homolog 6; TrEMBL-Plants: tr|G7I6D2|G7I6D2_MEDTR Carbon catabolite repressor-like protein; Found in the gene: LotjaGi5g1v0061600 LjG1.1_chr5 10281589 10294223 -
n.a. Carbon catabolite repressor 4-like protein; TAIR: AT5G11350.1 DNAse I-like superfamily protein; Swiss-Prot: sp|Q8VYU4|CCR4F_ARATH Carbon catabolite repressor protein 4 homolog 6; TrEMBL-Plants: tr|G7I6D2|G7I6D2_MEDTR Carbon catabolite repressor-like protein; Found in the gene: LotjaGi5g1v0061600 LjG1.1_chr5 10281868 10294200 -
n.a. Type I inositol-1,4,5-trisphosphate 5-phosphatase; TAIR: AT2G37440.1 DNAse I-like superfamily protein; Swiss-Prot: sp|Q0WT19|IP5P8_ARATH Type I inositol polyphosphate 5-phosphatase 8; TrEMBL-Plants: tr|A0A151R1V5|A0A151R1V5_CAJCA Type I inositol-1,4,5-trisphosphate 5-phosphatase CVP2; Found in the gene: LotjaGi5g1v0069800 LjG1.1_chr5 11544638 11557303 -
n.a. Retrovirus-related Pol polyprotein LINE-1; TAIR: AT1G43760.1 DNAse I-like superfamily protein; Swiss-Prot: sp|P08548|LIN1_NYCCO LINE-1 reverse transcriptase homolog; TrEMBL-Plants: tr|Q2HUN6|Q2HUN6_MEDTR RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H; Found in the gene: LotjaGi5g1v0073400_LC LjG1.1_chr5 12164950 12167690 +
n.a. Transposon TX1 uncharacterized; TAIR: AT1G43760.1 DNAse I-like superfamily protein; Swiss-Prot: sp|P26905|DPPD_BACSU Dipeptide transport ATP-binding protein DppD; TrEMBL-Plants: tr|A0A151TI35|A0A151TI35_CAJCA Transposon TX1 uncharacterized; Found in the gene: LotjaGi5g1v0109800_LC LjG1.1_chr5 21086111 21087142 +
n.a. Carbon catabolite repressor 4-like protein; TAIR: AT3G58580.1 DNAse I-like superfamily protein; Swiss-Prot: sp|Q9M2F8|CCR4B_ARATH Carbon catabolite repressor protein 4 homolog 2; TrEMBL-Plants: tr|I1L2J3|I1L2J3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0115900 LjG1.1_chr5 23615368 23624057 -
n.a. Carbon catabolite repressor 4-like protein; TAIR: AT3G58580.1 DNAse I-like superfamily protein; Swiss-Prot: sp|Q9M2F8|CCR4B_ARATH Carbon catabolite repressor protein 4 homolog 2; TrEMBL-Plants: tr|I1L2J3|I1L2J3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0115900 LjG1.1_chr5 23618264 23623641 -
n.a. Endonuclease/exonuclease/phosphatase family protein; TAIR: AT4G36050.2 endonuclease/exonuclease/phosphatase family protein; Swiss-Prot: sp|F4JNY0|APE2_ARATH DNA-(apurinic or apyrimidinic site) lyase 2; TrEMBL-Plants: tr|A0A0B2R0X2|A0A0B2R0X2_GLYSO Mediator of RNA polymerase II transcription subunit 25; Found in the gene: LotjaGi5g1v0120300_LC LjG1.1_chr5 25105875 25106425 -
n.a. Transposon TX1 uncharacterized; TAIR: AT1G43760.1 DNAse I-like superfamily protein; Swiss-Prot: sp|P11531|DMD_MOUSE Dystrophin; TrEMBL-Plants: tr|A0A151RVK1|A0A151RVK1_CAJCA Transposon TX1 uncharacterized; Found in the gene: LotjaGi5g1v0122200_LC LjG1.1_chr5 25762765 25764357 -
n.a. LINE-1 reverse transcriptase like; TAIR: AT1G43760.1 DNAse I-like superfamily protein; Swiss-Prot: sp|P14381|YTX2_XENLA Transposon TX1 uncharacterized 149 kDa protein; TrEMBL-Plants: tr|A0A151TFK9|A0A151TFK9_CAJCA Transposon TX1 uncharacterized; Found in the gene: LotjaGi5g1v0130800_LC LjG1.1_chr5 29748834 29754251 +
n.a. DNA-(apurinic or apyrimidinic site) lyase; TAIR: AT2G41460.1 apurinic endonuclease-redox protein; Swiss-Prot: sp|P45951|ARP_ARATH DNA-(apurinic or apyrimidinic site) lyase, chloroplastic; TrEMBL-Plants: tr|K7K9G6|K7K9G6_SOYBN DNA-(apurinic or apyrimidinic site) lyase; Found in the gene: LotjaGi5g1v0135000 LjG1.1_chr5 31929476 31938027 +
n.a. Type I inositol-1,4,5-trisphosphate 5-phosphatase CVP2; TAIR: AT3G63240.1 DNAse I-like superfamily protein; Swiss-Prot: sp|Q8GTS0|IP5P4_ARATH Type I inositol polyphosphate 5-phosphatase 4; TrEMBL-Plants: tr|V7BGL3|V7BGL3_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0169900 LjG1.1_chr5 43487190 43492728 -
n.a. Type I inositol-1,4,5-trisphosphate 5-phosphatase CVP2; TAIR: AT3G63240.1 DNAse I-like superfamily protein; Swiss-Prot: sp|Q8GTS0|IP5P4_ARATH Type I inositol polyphosphate 5-phosphatase 4; TrEMBL-Plants: tr|V7BGL3|V7BGL3_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0169900 LjG1.1_chr5 43487423 43492749 -
n.a. Type I inositol-1,4,5-trisphosphate 5-phosphatase CVP2; TAIR: AT3G63240.1 DNAse I-like superfamily protein; Swiss-Prot: sp|Q8GTS0|IP5P4_ARATH Type I inositol polyphosphate 5-phosphatase 4; TrEMBL-Plants: tr|V7BGL3|V7BGL3_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0169900 LjG1.1_chr5 43488782 43492687 -
n.a. Type I inositol-1,4,5-trisphosphate 5-phosphatase CVP2; TAIR: AT3G63240.1 DNAse I-like superfamily protein; Swiss-Prot: sp|Q8GTS0|IP5P4_ARATH Type I inositol polyphosphate 5-phosphatase 4; TrEMBL-Plants: tr|A0A151RLD8|A0A151RLD8_CAJCA Type I inositol-1,4,5-trisphosphate 5-phosphatase CVP2; Found in the gene: LotjaGi5g1v0169900 LjG1.1_chr5 43488998 43492001 -
n.a. Type I inositol-1,4,5-trisphosphate 5-phosphatase CVP2; TAIR: AT3G63240.1 DNAse I-like superfamily protein; Swiss-Prot: sp|Q8GTS0|IP5P4_ARATH Type I inositol polyphosphate 5-phosphatase 4; TrEMBL-Plants: tr|V7BGL3|V7BGL3_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0169900 LjG1.1_chr5 43488998 43492008 -
n.a. Type I inositol-1,4,5-trisphosphate 5-phosphatase; TAIR: AT1G65580.1 Endonuclease/exonuclease/phosphatase family protein; Swiss-Prot: sp|Q84W55|IP5PF_ARATH Type II inositol polyphosphate 5-phosphatase 15; TrEMBL-Plants: tr|I1NII6|I1NII6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0202600 LjG1.1_chr5 50276917 50302150 +
n.a. LINE-1 reverse transcriptase like; TAIR: AT3G24255.4 RNA-directed DNA polymerase (reverse transcriptase)-related family protein; Swiss-Prot: sp|O00370|LORF2_HUMAN LINE-1 retrotransposable element ORF2 protein; TrEMBL-Plants: tr|A0A151RYW3|A0A151RYW3_CAJCA Transposon TX1 uncharacterized; Found in the gene: LotjaGi5g1v0208900_LC LjG1.1_chr5 51091385 51096141 +
n.a. LINE-1 reverse transcriptase like; TAIR: AT1G43760.1 DNAse I-like superfamily protein; Swiss-Prot: sp|O00370|LORF2_HUMAN LINE-1 retrotransposable element ORF2 protein; TrEMBL-Plants: tr|F4NCI4|F4NCI4_BETVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0219100_LC LjG1.1_chr5 52545312 52549906 -
n.a. Transposon TX1 uncharacterized; TAIR: AT1G43760.1 DNAse I-like superfamily protein; Swiss-Prot: sp|O00370|LORF2_HUMAN LINE-1 retrotransposable element ORF2 protein; TrEMBL-Plants: tr|F4NCI4|F4NCI4_BETVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0219100_LC LjG1.1_chr5 52545312 52549906 -
n.a. Endonuclease/exonuclease/phosphatase family protein; TAIR: AT2G48030.1 DNAse I-like superfamily protein; Swiss-Prot: sp|P0AAW3|YBHP_ECO57 Uncharacterized protein YbhP; TrEMBL-Plants: tr|A0A0B2SP53|A0A0B2SP53_GLYSO Uncharacterized protein; Found in the gene: LotjaGi5g1v0260000 LjG1.1_chr5 56853464 56858636 +
n.a. Type I inositol-1,4,5-trisphosphate 5-phosphatase 1; TAIR: AT1G71710.1 DNAse I-like superfamily protein; Swiss-Prot: sp|Q8H0Z6|IP5P3_ARATH Type IV inositol polyphosphate 5-phosphatase 3; TrEMBL-Plants: tr|I1LDC4|I1LDC4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0286800 LjG1.1_chr5 60337920 60351267 +
n.a. Type I inositol 1,4,5-trisphosphate 5-phosphatase CVP2; TAIR: AT2G32010.1 CVP2 like 1; Swiss-Prot: sp|Q0WQ41|IP5P7_ARATH Type IV inositol polyphosphate 5-phosphatase 7; TrEMBL-Plants: tr|I1LE29|I1LE29_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0311800 LjG1.1_chr5 62978588 62984051 +
n.a. Type I inositol-1,4,5-trisphosphate 5-phosphatase CVP2; TAIR: AT2G32010.1 CVP2 like 1; Swiss-Prot: sp|Q0WQ41|IP5P7_ARATH Type IV inositol polyphosphate 5-phosphatase 7; TrEMBL-Plants: tr|A0A0B2Q3A0|A0A0B2Q3A0_GLYSO Type I inositol-1,4,5-trisphosphate 5-phosphatase CVP2; Found in the gene: LotjaGi5g1v0311800 LjG1.1_chr5 62979126 62982377 +
n.a. Type I inositol-1,4,5-trisphosphate 5-phosphatase CVP2; TAIR: AT2G32010.1 CVP2 like 1; Swiss-Prot: sp|Q0WQ41|IP5P7_ARATH Type IV inositol polyphosphate 5-phosphatase 7; TrEMBL-Plants: tr|A0A0B2Q3A0|A0A0B2Q3A0_GLYSO Type I inositol-1,4,5-trisphosphate 5-phosphatase CVP2; Found in the gene: LotjaGi5g1v0311800 LjG1.1_chr5 62979759 62982377 +
n.a. Type I inositol-1,4,5-trisphosphate 5-phosphatase CVP2; TAIR: AT2G32010.1 CVP2 like 1; Swiss-Prot: sp|Q0WQ41|IP5P7_ARATH Type IV inositol polyphosphate 5-phosphatase 7; TrEMBL-Plants: tr|A0A0B2Q3A0|A0A0B2Q3A0_GLYSO Type I inositol-1,4,5-trisphosphate 5-phosphatase CVP2; Found in the gene: LotjaGi5g1v0311800 LjG1.1_chr5 62979761 62982377 +
n.a. Type I inositol-1,4,5-trisphosphate 5-phosphatase; TAIR: AT1G05470.1 DNAse I-like superfamily protein; Swiss-Prot: sp|Q9LR47|IP5P6_ARATH Type IV inositol polyphosphate 5-phosphatase 6; TrEMBL-Plants: tr|I1JAQ6|I1JAQ6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0311800 LjG1.1_chr5 62980798 62982028 +
n.a. Type I inositol-1,4,5-trisphosphate 5-phosphatase; TAIR: AT2G43900.1 Endonuclease/exonuclease/phosphatase family protein; Swiss-Prot: sp|O80560|IP5PC_ARATH Type I inositol polyphosphate 5-phosphatase 12; TrEMBL-Plants: tr|G7KJV0|G7KJV0_MEDTR Type I inositol-1,4,5-trisphosphate 5-phosphatase; Found in the gene: LotjaGi5g1v0329800 LjG1.1_chr5 64686566 64693218 +
n.a. Type I inositol-1,4,5-trisphosphate 5-phosphatase; TAIR: AT1G05630.1 Endonuclease/exonuclease/phosphatase family protein; Swiss-Prot: sp|O80560|IP5PC_ARATH Type I inositol polyphosphate 5-phosphatase 12; TrEMBL-Plants: tr|A0A0S3RA92|A0A0S3RA92_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0329800 LjG1.1_chr5 64686757 64692639 +
n.a. Endonuclease/exonuclease/phosphatase family protein; TAIR: AT4G01480.1 pyrophosphorylase 5; Swiss-Prot: sp|P14381|YTX2_XENLA Transposon TX1 uncharacterized 149 kDa protein; TrEMBL-Plants: tr|F4NCL3|F4NCL3_BETVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0035400_LC LjG1.1_chr6 6731443 6735652 -
n.a. Endonuclease/exonuclease/phosphatase family protein; TAIR: AT4G36050.3 endonuclease/exonuclease/phosphatase family protein; Swiss-Prot: sp|O00370|LORF2_HUMAN LINE-1 retrotransposable element ORF2 protein; TrEMBL-Plants: tr|A0A151QNL1|A0A151QNL1_CAJCA Putative ribonuclease H protein family; Found in the gene: LotjaGi6g1v0039500_LC LjG1.1_chr6 7633793 7638403 +
n.a. LINE-1 reverse transcriptase like; TAIR: AT1G43760.1 DNAse I-like superfamily protein; Swiss-Prot: sp|P14381|YTX2_XENLA Transposon TX1 uncharacterized 149 kDa protein; TrEMBL-Plants: tr|A0A151RYW3|A0A151RYW3_CAJCA Transposon TX1 uncharacterized; Found in the gene: LotjaGi6g1v0039500_LC LjG1.1_chr6 7633793 7638403 +
n.a. Transposon TX1 uncharacterized; TAIR: AT1G43760.1 DNAse I-like superfamily protein; Swiss-Prot: sp|P14381|YTX2_XENLA Transposon TX1 uncharacterized 149 kDa protein; TrEMBL-Plants: tr|A0A0B2R0Q2|A0A0B2R0Q2_GLYSO LINE-1 reverse transcriptase like; Found in the gene: LotjaGi6g1v0079800_LC LjG1.1_chr6 15228264 15230056 +