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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR009010
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 24 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.605s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0163169.1
n.a. Cell division control protein-like protein, partial [Medicago truncatula] gi|357510729|ref|XP_003625653.1| chr0 77102263 77102979 +
2 domain predictions
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Lj0g3v0306179.1
n.a. PREDICTED: cell division cycle protein 48 homolog [Glycine max] gi|356543494|ref|XP_003540195.1| chr0 159664123 159665461 +
2 domain predictions
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Lj1g3v0342010.1
n.a. PREDICTED: cell division cycle protein 48 homolog [Glycine max] gi|356508699|ref|XP_003523092.1| chr1 4106123 4116038 -
2 domain predictions
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Lj1g3v4591150.1
n.a. Cell division control protein-like protein, partial [Medicago truncatula] gi|357510729|ref|XP_003625653.1| chr1 54940331 54941740 -
2 domain predictions
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Lj2g3v2925140.1
n.a. PREDICTED: peroxisome biogenesis protein 1-like [Glycine max] gi|356521604|ref|XP_003529444.1| chr2 38137136 38138543 +
2 domain predictions
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Lj3g3v3067920.1
n.a. PREDICTED: cell division cycle protein 48 homolog [Glycine max] gi|356543494|ref|XP_003540195.1| chr3 38349614 38354105 +
2 domain predictions
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Lj4g3v0451140.1
n.a. PREDICTED: vesicle-fusing ATPase-like isoform X3 [Cicer arietinum] gi|502142631|ref|XP_004505053.1| chr4 6617397 6626311 -
2 domain predictions
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Lj4g3v0668230.1
n.a. PREDICTED: peroxisome biogenesis protein 1-like [Glycine max] gi|356521604|ref|XP_003529444.1| chr4 10946287 10966273 -
2 domain predictions
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Lj5g3v0657030.1
n.a. Cell division control protein-like protein, partial [Medicago truncatula] gi|357510729|ref|XP_003625653.1| chr5 9027834 9029243 +
2 domain predictions
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LotjaGi1g1v0177300.1
n.a. Cell division cycle protein 48 like; TAIR: AT5G03340.1 ATPase, AAA-type, CDC48 protein; Swiss-Prot: sp|P54774|CDC48_SOYBN Cell division cycle protein 48 homolog; TrEMBL-Plants: tr|I1JXA0|I1JXA0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0177300 LjG1.1_chr1 34042319 34052571 -
2 domain predictions
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LotjaGi1g1v0177300.2
n.a. Cell division cycle protein 48 like; TAIR: AT5G03340.1 ATPase, AAA-type, CDC48 protein; Swiss-Prot: sp|P54774|CDC48_SOYBN Cell division cycle protein 48 homolog; TrEMBL-Plants: tr|I1JXA0|I1JXA0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0177300 LjG1.1_chr1 34046551 34051197 -
2 domain predictions
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LotjaGi1g1v0177300.4
n.a. Cell division cycle protein 48 like; TAIR: AT5G03340.1 ATPase, AAA-type, CDC48 protein; Swiss-Prot: sp|P54774|CDC48_SOYBN Cell division cycle protein 48 homolog; TrEMBL-Plants: tr|I1JXA0|I1JXA0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0177300 LjG1.1_chr1 34046580 34051200 -
2 domain predictions
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LotjaGi1g1v0177300.5
n.a. Cell division cycle protein 48 like; TAIR: AT5G03340.1 ATPase, AAA-type, CDC48 protein; Swiss-Prot: sp|P54774|CDC48_SOYBN Cell division cycle protein 48 homolog; TrEMBL-Plants: tr|I1JXA0|I1JXA0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0177300 LjG1.1_chr1 34046580 34051264 -
2 domain predictions
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LotjaGi1g1v0177300.6
n.a. Cell division cycle protein 48 like; TAIR: AT5G03340.1 ATPase, AAA-type, CDC48 protein; Swiss-Prot: sp|P54774|CDC48_SOYBN Cell division cycle protein 48 homolog; TrEMBL-Plants: tr|I1JXA0|I1JXA0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0177300 LjG1.1_chr1 34046580 34051422 -
2 domain predictions
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LotjaGi1g1v0177300.7
n.a. Cell division cycle protein 48 like; TAIR: AT5G03340.1 ATPase, AAA-type, CDC48 protein; Swiss-Prot: sp|P54774|CDC48_SOYBN Cell division cycle protein 48 homolog; TrEMBL-Plants: tr|I1JXA0|I1JXA0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0177300 LjG1.1_chr1 34046580 34051467 -
2 domain predictions
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LotjaGi1g1v0689100.1
n.a. Cell division cycle protein 48 like; TAIR: AT5G03340.1 ATPase, AAA-type, CDC48 protein; Swiss-Prot: sp|P54774|CDC48_SOYBN Cell division cycle protein 48 homolog; TrEMBL-Plants: tr|I1JPP3|I1JPP3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0689100 LjG1.1_chr1 125666832 125672262 +
2 domain predictions
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LotjaGi3g1v0487400.1
n.a. Cell division cycle protein 48 like; TAIR: AT5G03340.1 ATPase, AAA-type, CDC48 protein; Swiss-Prot: sp|P54774|CDC48_SOYBN Cell division cycle protein 48 homolog; TrEMBL-Plants: tr|A0A151TNG4|A0A151TNG4_CAJCA Cell division cycle protein 48 isogeny; Found in the gene: LotjaGi3g1v0487400 LjG1.1_chr3 90505715 90510271 +
2 domain predictions
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LotjaGi3g1v0487400.2
n.a. Cell division cycle protein 48 like; TAIR: AT5G03340.1 ATPase, AAA-type, CDC48 protein; Swiss-Prot: sp|P54774|CDC48_SOYBN Cell division cycle protein 48 homolog; TrEMBL-Plants: tr|A0A151TNG4|A0A151TNG4_CAJCA Cell division cycle protein 48 isogeny; Found in the gene: LotjaGi3g1v0487400 LjG1.1_chr3 90505804 90510030 +
2 domain predictions
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LotjaGi3g1v0487400.3
n.a. Cell division cycle protein 48 like; TAIR: AT5G03340.1 ATPase, AAA-type, CDC48 protein; Swiss-Prot: sp|P54774|CDC48_SOYBN Cell division cycle protein 48 homolog; TrEMBL-Plants: tr|A0A151TNG4|A0A151TNG4_CAJCA Cell division cycle protein 48 isogeny; Found in the gene: LotjaGi3g1v0487400 LjG1.1_chr3 90505840 90510030 +
2 domain predictions
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LotjaGi3g1v0487400.4
n.a. Cell division cycle protein 48 like; TAIR: AT5G03340.1 ATPase, AAA-type, CDC48 protein; Swiss-Prot: sp|P54774|CDC48_SOYBN Cell division cycle protein 48 homolog; TrEMBL-Plants: tr|A0A151TNG4|A0A151TNG4_CAJCA Cell division cycle protein 48 isogeny; Found in the gene: LotjaGi3g1v0487400 LjG1.1_chr3 90505854 90510030 +
2 domain predictions
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LotjaGi3g1v0487400.5
n.a. Cell division cycle protein 48 like; TAIR: AT5G03340.1 ATPase, AAA-type, CDC48 protein; Swiss-Prot: sp|P54774|CDC48_SOYBN Cell division cycle protein 48 homolog; TrEMBL-Plants: tr|A0A151TNG4|A0A151TNG4_CAJCA Cell division cycle protein 48 isogeny; Found in the gene: LotjaGi3g1v0487400 LjG1.1_chr3 90505866 90510239 +
2 domain predictions
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LotjaGi3g1v0487400.6
n.a. Cell division cycle protein 48 like; TAIR: AT5G03340.1 ATPase, AAA-type, CDC48 protein; Swiss-Prot: sp|P54774|CDC48_SOYBN Cell division cycle protein 48 homolog; TrEMBL-Plants: tr|A0A151TNG4|A0A151TNG4_CAJCA Cell division cycle protein 48 isogeny; Found in the gene: LotjaGi3g1v0487400 LjG1.1_chr3 90505915 90510030 +
2 domain predictions
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LotjaGi4g1v0086200.1
n.a. ATP-dependent zinc metalloprotease FtsH 1; TAIR: AT5G08470.1 peroxisome 1; Swiss-Prot: sp|Q9FNP1|PEX1_ARATH Peroxisome biogenesis protein 1; TrEMBL-Plants: tr|I1KMB2|I1KMB2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0086200 LjG1.1_chr4 11364245 11384978 -
2 domain predictions
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LotjaGi5g1v0081500.1
n.a. Cell division cycle protein 48 like; TAIR: AT5G03340.1 ATPase, AAA-type, CDC48 protein; Swiss-Prot: sp|Q9LZF6|CD48E_ARATH Cell division control protein 48 homolog E; TrEMBL-Plants: tr|I1JPP3|I1JPP3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0081500 LjG1.1_chr5 13327208 13331582 -
2 domain predictions
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