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| Field | Value |
|---|---|
| Gene ID | Lj1g3v0342010 |
| Transcript ID | Lj1g3v0342010.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: cell division cycle protein 48 homolog [Glycine max] gi|356508699|ref|XP_003523092.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 29 | 29 | – | – | |
| PANTHER | 16 | 718 | 703 | 0 | – | |
| PANTHER | 16 | 718 | 703 | 0 | – | |
| Gene3D | 20 | 122 | 103 | 2.00E-49 | – | |
| SUPERFAMILY | 36 | 120 | 85 | 1.78E-27 | ||
| Pfam | 40 | 121 | 82 | 7.40E-22 | ||
| SMART | 40 | 123 | 84 | 7.30E-30 | ||
| TIGRFAM | 41 | 780 | 740 | 3.20E-258 | ||
| SUPERFAMILY | 122 | 214 | 93 | 7.52E-33 | ||
| Gene3D | 123 | 212 | 90 | 2.50E-43 | ||
| SMART | 140 | 206 | 67 | 5.60E-16 | ||
| Pfam | 142 | 205 | 64 | 1.70E-12 | ||
| Gene3D | 213 | 394 | 182 | 7.20E-63 | ||
| SUPERFAMILY | 214 | 476 | 263 | 8.14E-66 | ||
| CDD | 221 | 384 | 164 | 7.64E-31 | – | |
| SMART | 251 | 387 | 137 | 2.10E-24 | ||
| Pfam | 255 | 384 | 130 | 5.80E-45 | ||
| ProSitePatterns | 355 | 373 | 19 | – | ||
| Gene3D | 395 | 476 | 82 | 1.20E-28 | – | |
| Gene3D | 482 | 669 | 188 | 1.30E-66 | ||
| SUPERFAMILY | 486 | 776 | 291 | 9.47E-76 | ||
| CDD | 494 | 661 | 168 | 5.38E-31 | – | |
| SMART | 524 | 663 | 140 | 2.90E-24 | ||
| Pfam | 528 | 661 | 134 | 1.30E-45 | ||
| ProSitePatterns | 631 | 649 | 19 | – | ||
| Gene3D | 670 | 762 | 93 | 2.50E-20 | – | |
| MobiDBLite | 723 | 743 | 21 | – | – | |
| PANTHER | 740 | 787 | 48 | 0 | – | |
| PANTHER | 740 | 787 | 48 | 0 | – | |
| MobiDBLite | 785 | 818 | 34 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Molecular function | Hydrolase activity | Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3. |
Expression pattern of Lj1g3v0342010.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v0342010.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.