Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0416000 |
| Transcript ID | LotjaGi3g1v0416000.3 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | GTPase Obg; TAIR: AT1G72660.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|Q9CAI1|DRG2_ARATH Developmentally-regulated G-protein 2; TrEMBL-Plants: tr|I1KHA2|I1KHA2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0416000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:82176485..82182208) extracted from Lotus japonicus Gifu genome v1.2.
ATGGGTATCATTGAGAGGATCAAAGAAATTGAAGCCGAAATGGCTCGAACCCAGAAAAACAAAGCCACAGGTACCATTCC TCCTGCATCTATTGATTTTCAGTATAATTGGATTGGAATAACCATCAAAATTTCATAAAAAAGTGTTTTTTTTTTGTTGT GGGTAGTTTTTGTTATTTTTCCCAAAATCAATTTTTTGCTAGCCTTATTTGAATTTGTTTATTGTGCAGAGTATCATCTT GGGCAGCTCAAGGCCAAGATAGCAAAACTTAGGACACAGTTGCTGGAGCCTCCAAAAGTATGCACAGATTTTTTATTTTT ATAATTTTTTTGTTCCATGATTGTGATTGCTATAGTTTCAAAAAAAAATGATTGTGATTGCTATTAATGTCATTATTTTT AATTTACTCTTCAATGTTCTGTTTCCCTTCTGATGATTGATGCAAGTTTTGATTTCATGGATATGTTTTTTTTTTTCTTT GGATTGGCACTTTTCTTTTATAATTTGGTCTGTTTTTAATAAGGGTTGTCGAAATAACCATAGGCGAAGTTTGGGTTAAA TCACCCTAGTTCTAGGTGGAAAAGTGATATTTAAGATAAGTGGGCTAGAAATTTCATAATTTATCATTTATCTTAAATGT CGTTGGGCTAGAAATTTCATAATTTATCATTTAACTTAAATGTGGTTGGTCCACCCAGGACTAGGGTGATTTAACCCAAA CTTTGTCTAGGAGCCCCTTTAAATAATATAAGTTCATCTGTAAGTTTCATGCATCATTCTTTTCTTTTTTCCAAAGAATG AGAAACCTGAATGCATGAGCAAGAATGATTCTGCATATTTTAGGATTGGGTTTTTTACACTTATTTAGAGTATGAAGTCT GTTTTAATATCTGTGGATTAGGAACTGAGGAGGGGATTTGCCAGATTGATTCTCAGACCCGGAACTTTTTATTTTCCGTT TTAGTTGTATTGATGTTTGAGCTACTGAAGAATTTATGCTCCTGTTTGACCCTAAACTTCATAAGCATTGTAGCATACAT GTTTAAAACAGAGAACAGTAACACACACACATATATTGTTTGTGGGGGGGGGGGGGTTAATGGATACAGAGTTATCTAAT CATTTTGAAGGCTCTGGCAGGACGATGGAGAATAAAATTTTATGATAATATTGCTGTTTTTTTGGGATCATGGTGTAGAG AACAATGGTTTTCGAAATAACACACATATATTCTTCCCCTTAATTTTTCAGGATCAATGGTTTTCTTGCCTTCTTAATAT GTGGCTAGCACACCAATTTTTTAGTGGTGTTTCTCTTATTCATTTGTAAAGGCCTTCATTTGTTTTTTCTGATGAATTCT TATAGTATTTTGATCTGTTATAAGTATTGAAATTTAGGAATTCAGTTAGTGAATCTTTTGCAGTAATTGTTTTTGGTTCA ACATGCGAAGTTTCTTAATTATTTGTCTGCCAAAACTTGCTATCCTTATGTACACTTTCTTACAAGGTGGAGTATCTTGG AAAATTATTTAATAGGGTTCTAGTGGAGGTGGAGAGGGATTTGAAGTTACGAAATTCGGCCATGGACGTGTTGCACTGAT TGGATTTCCAAGGTCTGCGTTCTAAAACGAATCCCCCAAATCAATTTCTCTAATCCTTTATTTATTCAATACTATTATTT TAATGGATTTAAGTTCTATTGGGATTTATTCTTTTGTATGTTTGTATTTGTGGTGTATGTACTGTACTGCATGCTTTTGG GTGTCTCTTTCTTCTACGTGGTGTAGTATGCCGTATGCGTATGCTTAAATTTTTATTTAGTTCGGTAAAAATCTAACCCT TCCCATATTTTTCCTTTTAATTTTCCAGTGTCGGGAAGTCAACTCTCTTGACAATGTTAACAGGCACACATTCAGAAGCT GCATCTTATGAGTTCACGACTCTGACCTGCATCCCTGGGATTATACATTATAATGATACTAAAATTCAGTTGCTTGATCT TCCTGGAATTATTGAGGGTGCTTCTGAAGGCAAGGGACGTGGGAGACAGGTAAAACTAAAATTACTTATTTTTATCATTC CTATAGCACGTTTTAGGGTCTTTTTGCACTTACAAATTGATAATCAGTTTGCACATAATGCTGTTATTATATTTCCTAAT ACATCAGAGGTAACTTGTGAATAGAATATGATGATTGGTTGTTTTTCACTGATTGCTTTGGGAAACCTGGCCTTTTCATT ATTAACCTTGCAAGTTTTTTTGTGTGAATGTTCTCTCAGGTTATTGCTGTTGCTAAATCTTCGGACATAGTGCTGATGGT TCTTGATGCCTCCAAAGTAAGTGTCTTTTGGCATTTTCTGATATCTGTCACTTTATGTTGTTGGTATTGCTAGTTGATAA GATGATCTGTTGGTTGTTGCTTTAAATTACTATTATTATAACTAGTGACTAGGGGTGATAAGTAGATAAGATATTGTCAT TAAAGACATCCTTCAAACAGGCCCGGTGACAAAACTCGTTTCTTTTTCATTAAGTAATATTACTCACTGTTACCTATTAT TTTTGTTTGTAAATATAAATTTACTTGCAAAGCTGTTATCTGATTGCATGACATCATAATATTACTGGATGATGTTTCTG ACTAACTTCATGCTCCAGTTGGTGAGTTAATGTGGGTTCATAATTTCCTTTTCCTATTTTCTTTATATTCCTTTTATCAC TTCTATTGTTCCAGGCTTCCCACTAATGTTATCATACCACAATGATTGTGTGTCTGCTTACATTTTATGGTCCCTTTTCT GCATCTGTGTTGCTTGTGGAATTGCTTCATACAGTGTTTGGCCAATATACTAGTAGTGTTTATTTGATTGGAAATTGCTA AACTTTCAATTTCCTTGCCACGTTTTTTTTGTCAGAGTGAGGGTCATAGGCAAATATTAACCAAGGAGCTTGAGGCTGTG GGCTTGCGTTTAAACCAGCGACCACCTCAAGTAAGTTTGTGCCCCAAAGGATATTTTGGGGTACATGACACGAAGCATAT ATTTTATATATCGATCTATGTTGGATGTTTATATTTTTCTCCTCACTTTCTCATGAACTCAGAGCTTTGTATTTCTTGGC AGATATATTTTAAAAAGAAAAAGACAGGAGGCATTTCATTCAACAGTACTATGCCTTTGACTCATGTAGATGAGAAGCTT TGCTATCAGATTCTGCATGAGTACAAAATTCACAATGCAGAGGTATAGAACAAACTTTAAAGTTATATCAGTTGTAATTC ATTTTCATGAACCGTTAATTATGGGATATTATCAGTATGCAGTTACAGTTGCAAATGTTAATTGCATTTTTTACTACTGC CATAGTTTGTCTAAATATGATGGAGCAAGTGTAGTGACTTGGGATGCTTGGCTGGTTGGTGATGTAAGCATGCTATCTTT TGCATATAATATGATTTTATAACTTGTAACAGTCAATGGCCAACTCTTATAAAACCTTAGAAAGAAGCTCTTTTAATGTC AGATTTTATGTAAAGTGAGAAAGTGATGGTGTATCCATGCTTAATTGAATCAAAAGTGCACTGTAATCTTAACTCAAGAA ATGAAAGGGTGGGTACACCCTCTTCCTCACATTATGTACAAGTCCACTTTATAGGAGATTTGTCCAAAGCCTTTGTCTGT TATAGAAAAGCCCAAGAATGACTTCATATATCTATCTTAAAGCCAAAAGCATTAGTCAAAGACCAAAGATGTACAAGTCC ACTTTATAGGAGATTTGTCCAAAGCCTTTTCCGATTGAAACGTGCTCAGTTTCACAGGCTTGCATGTTCTGAAAATTAGT TTTATCATAAGGAGTGGCAGAAACAAGGAACATACTCCTAATCATTTCATTATAGAGGCCTTTGATACTGTGTCAAATAT TGCTCACCTTAAAGCCAAAAGCATTAGTCAAAGACCAAAGAATGATTTTGTATATTTAACATTCGCTGTAAAATCTAAGT ATTTTTCATATGACGAGGTCATCATTGAGCATTCAATGTCATAGCTTTCTTTCTGAAATGAGGAGAAAAATGTCTGGAGA AAAATTAAAGTGGAAATGAGCAGTAATTTACACTCTTGTTTAATCATGTTATCAACAGAAGTTACTTTGTTGCCTGAAAA CAATTCACGGATTCCTTATTTGTTATTTGATTTTCTTCTGCATTTTGTTTGCATGGTTCTCTTTCACGTCTATCTGAGGC TAAGTGCATCTGTATTGCTGAGTTTGATCCTTGATGTCACTTGTTCCTGTTCATTAACGTCCTTCCAAGTAGAATTGGAC TTTCATGTTGGCGGAAACTATGATTATGAAGATCAGTCTGGCATTTTTCTGTGAATGAGAAATCCTAGCAAAATTCTTTT GAACACGCTCTCCAGCACAGCACACTCAATGTGATTGGTTGATTTTTTAAAAAGTTAACATATTTCTCTCATTTCTTAAA ATAATAGAACACTTTTTAAAAAATAAACCAATCATACTGAGTGTGTTGAAGAGTGTCCAAAAGAGTGTATTGATAGCACT CCTTTTCTGTGAATATAAAGTATCTTGTCTAGAGTTGTCATGTTGAATTTTGTAGTTTTCCTCATTACATCTGATAGATT CCGTAATTTTCCTTCTTACAATTACTATAATATAATCAGGTCTCTGTTTACCGCTATTTTCTACCTATATCAAGGGGTCA ACTGACAACTTCAATTTCAGATTCTTTTCCGTGAGGATGCCACAGTGGATGATCTCATTGATGTCATTGAAGGAAATCGT AAATACATGAAGTGTGTATATGTCTACAACAAGATAGATGTTGTTGGTATTGATGATGTGGACAGATTAGCCCGTCAACC TAATTCTGTTGTCATTAGTTGCAATTTGAAGGTAGTTTCATACTTTCAGTGCCAACAGAAGAATACAAGATACCATGAAG TTTTAGTGATTTTTTCAAAATATTCATAAATTCATGTTTTATGAACATTTTTTTTGTATATAGTAACACATAATTTTGTG TTTTTGTGAACAGCTGAACTTAGACAGACTACTTTCGAGGATGTGGGATGAAATGGGTCTGGTTAGAGTTTATACAAAAC CTCAAGGCCAGCAGCCTGATTTCGCTGAGCCTGTGGTTTTATCTGCTGTATGTTGTCTTATCATTATGCTTATAATAAAC AGCTGTCCCTTATTCTATTTTACTTTTTTGAAAACCTTTAGCTTTTTTGTTGTGTTTTTATATTCTTCCAATCCATCAGA GTCATCACTTTCTCTGGCAAATTGTTTTAGGATAGAGGTGGCTGCACTGTAGAAGACTTCTGCAACCACATACACAGAAG TTTGGTGAAGGACGTGAAGTATGTGCTGGTCTGGGGAACAAGTGCTAGGCACTACCCACAACATTGTGGCCTTGCTCATT ATCTTAATGATGAGGATGTGGTTCAGATTGTCAAGAAAAAGGTACCCTTCATCTTGTTTTGTGTCGTGTGACTGATCGGT GTATCACTGTGTTCGAACTTTGAATTCCATGTCGTTTACTTGTTACTGGCTGAAAATGCTTTACATTTGTGATAATGAGA GATTGAAACAATGATGTGTGTCCTTCAGGAAAGAGATGAGGGAGGAAGGGGTCGATTCAAGTCGCATTCCAATGCTCCTG CGCGGATATCTGACAGAGAGAAGAAGGCTCCACTGAAGACATAA
CDS sequence (LotjaGi3g1v0416000.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTAACAGGCACACATTCAGAAGCTGCATCTTATGAGTTCACGACTCTGACCTGCATCCCTGGGATTATACATTATAA TGATACTAAAATTCAGTTGCTTGATCTTCCTGGAATTATTGAGGGTGCTTCTGAAGGCAAGGGACGTGGGAGACAGGTTA TTGCTGTTGCTAAATCTTCGGACATAGTGCTGATGGTTCTTGATGCCTCCAAAAGTGAGGGTCATAGGCAAATATTAACC AAGGAGCTTGAGGCTGTGGGCTTGCGTTTAAACCAGCGACCACCTCAAATATATTTTAAAAAGAAAAAGACAGGAGGCAT TTCATTCAACAGTACTATGCCTTTGACTCATGTAGATGAGAAGCTTTGCTATCAGATTCTGCATGAGTACAAAATTCACA ATGCAGAGATTCTTTTCCGTGAGGATGCCACAGTGGATGATCTCATTGATGTCATTGAAGGAAATCGTAAATACATGAAG TGTGTATATGTCTACAACAAGATAGATGTTGTTGGTATTGATGATGTGGACAGATTAGCCCGTCAACCTAATTCTGTTGT CATTAGTTGCAATTTGAAGCTGAACTTAGACAGACTACTTTCGAGGATGTGGGATGAAATGGGTCTGGTTAGAGTTTATA CAAAACCTCAAGGCCAGCAGCCTGATTTCGCTGAGCCTGTGGTTTTATCTGCTGATAGAGGTGGCTGCACTGTAGAAGAC TTCTGCAACCACATACACAGAAGTTTGGTGAAGGACGTGAAGTATGTGCTGGTCTGGGGAACAAGTGCTAGGCACTACCC ACAACATTGTGGCCTTGCTCATTATCTTAATGATGAGGATGTGGTTCAGATTGTCAAGAAAAAGGAAAGAGATGAGGGAG GAAGGGGTCGATTCAAGTCGCATTCCAATGCTCCTGCGCGGATATCTGACAGAGAGAAGAAGGCTCCACTGAAGACATAA
Protein sequence (LotjaGi3g1v0416000.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLTGTHSEAASYEFTTLTCIPGIIHYNDTKIQLLDLPGIIEGASEGKGRGRQVIAVAKSSDIVLMVLDASKSEGHRQILT KELEAVGLRLNQRPPQIYFKKKKTGGISFNSTMPLTHVDEKLCYQILHEYKIHNAEILFREDATVDDLIDVIEGNRKYMK CVYVYNKIDVVGIDDVDRLARQPNSVVISCNLKLNLDRLLSRMWDEMGLVRVYTKPQGQQPDFAEPVVLSADRGGCTVED FCNHIHRSLVKDVKYVLVWGTSARHYPQHCGLAHYLNDEDVVQIVKKKERDEGGRGRFKSHSNAPARISDREKKAPLKT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | 1 | 215 | 215 | 4.8793E-143 | – | |
| ProSiteProfiles | 1 | 208 | 208 | 43.5 | ||
| PANTHER | 1 | 318 | 318 | 1.4E-211 | – | |
| PANTHER | 1 | 318 | 318 | 1.4E-211 | – | |
| Gene3D | 1 | 105 | 105 | 3.0E-23 | – | |
| SUPERFAMILY | 2 | 223 | 222 | 9.59E-44 | ||
| Pfam | 2 | 98 | 97 | 1.7E-11 | ||
| PRINTS | 6 | 24 | 19 | 1.2E-18 | ||
| PRINTS | 33 | 48 | 16 | 1.2E-18 | ||
| ProSitePatterns | 35 | 48 | 14 | - | ||
| PRINTS | 50 | 68 | 19 | 1.2E-18 | ||
| Pfam | 104 | 209 | 106 | 8.0E-43 | ||
| Gene3D | 114 | 204 | 91 | 3.2E-5 | – | |
| SUPERFAMILY | 204 | 286 | 83 | 9.48E-15 | ||
| Gene3D | 205 | 293 | 89 | 8.0E-35 | ||
| CDD | 207 | 287 | 81 | 4.93489E-47 | – | |
| ProSiteProfiles | 208 | 286 | 79 | 17.932 | – | |
| Pfam | 210 | 286 | 77 | 1.3E-23 | ||
| MobiDBLite | 288 | 319 | 32 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | GTP binding | Interacting selectively and non-covalently with GTP, guanosine triphosphate. |
Expression pattern of LotjaGi3g1v0416000.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…