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LotjaGi3g1v0416000.4

Overview

Field Value
Gene ID LotjaGi3g1v0416000
Transcript ID LotjaGi3g1v0416000.4
Related isoforms 3
Lotus japonicus genome version Gifu v1.2
Description GTPase Obg; TAIR: AT1G72660.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|Q9CAI1|DRG2_ARATH Developmentally-regulated G-protein 2; TrEMBL-Plants: tr|I1KHA2|I1KHA2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0416000
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr3:82176485..82182208) extracted from Lotus japonicus Gifu genome v1.2.

ATGGGTATCATTGAGAGGATCAAAGAAATTGAAGCCGAAATGGCTCGAACCCAGAAAAACAAAGCCACAGGTACCATTCC TCCTGCATCTATTGATTTTCAGTATAATTGGATTGGAATAACCATCAAAATTTCATAAAAAAGTGTTTTTTTTTTGTTGT GGGTAGTTTTTGTTATTTTTCCCAAAATCAATTTTTTGCTAGCCTTATTTGAATTTGTTTATTGTGCAGAGTATCATCTT GGGCAGCTCAAGGCCAAGATAGCAAAACTTAGGACACAGTTGCTGGAGCCTCCAAAAGTATGCACAGATTTTTTATTTTT ATAATTTTTTTGTTCCATGATTGTGATTGCTATAGTTTCAAAAAAAAATGATTGTGATTGCTATTAATGTCATTATTTTT AATTTACTCTTCAATGTTCTGTTTCCCTTCTGATGATTGATGCAAGTTTTGATTTCATGGATATGTTTTTTTTTTTCTTT GGATTGGCACTTTTCTTTTATAATTTGGTCTGTTTTTAATAAGGGTTGTCGAAATAACCATAGGCGAAGTTTGGGTTAAA TCACCCTAGTTCTAGGTGGAAAAGTGATATTTAAGATAAGTGGGCTAGAAATTTCATAATTTATCATTTATCTTAAATGT CGTTGGGCTAGAAATTTCATAATTTATCATTTAACTTAAATGTGGTTGGTCCACCCAGGACTAGGGTGATTTAACCCAAA CTTTGTCTAGGAGCCCCTTTAAATAATATAAGTTCATCTGTAAGTTTCATGCATCATTCTTTTCTTTTTTCCAAAGAATG AGAAACCTGAATGCATGAGCAAGAATGATTCTGCATATTTTAGGATTGGGTTTTTTACACTTATTTAGAGTATGAAGTCT GTTTTAATATCTGTGGATTAGGAACTGAGGAGGGGATTTGCCAGATTGATTCTCAGACCCGGAACTTTTTATTTTCCGTT TTAGTTGTATTGATGTTTGAGCTACTGAAGAATTTATGCTCCTGTTTGACCCTAAACTTCATAAGCATTGTAGCATACAT GTTTAAAACAGAGAACAGTAACACACACACATATATTGTTTGTGGGGGGGGGGGGGTTAATGGATACAGAGTTATCTAAT CATTTTGAAGGCTCTGGCAGGACGATGGAGAATAAAATTTTATGATAATATTGCTGTTTTTTTGGGATCATGGTGTAGAG AACAATGGTTTTCGAAATAACACACATATATTCTTCCCCTTAATTTTTCAGGATCAATGGTTTTCTTGCCTTCTTAATAT GTGGCTAGCACACCAATTTTTTAGTGGTGTTTCTCTTATTCATTTGTAAAGGCCTTCATTTGTTTTTTCTGATGAATTCT TATAGTATTTTGATCTGTTATAAGTATTGAAATTTAGGAATTCAGTTAGTGAATCTTTTGCAGTAATTGTTTTTGGTTCA ACATGCGAAGTTTCTTAATTATTTGTCTGCCAAAACTTGCTATCCTTATGTACACTTTCTTACAAGGTGGAGTATCTTGG AAAATTATTTAATAGGGTTCTAGTGGAGGTGGAGAGGGATTTGAAGTTACGAAATTCGGCCATGGACGTGTTGCACTGAT TGGATTTCCAAGGTCTGCGTTCTAAAACGAATCCCCCAAATCAATTTCTCTAATCCTTTATTTATTCAATACTATTATTT TAATGGATTTAAGTTCTATTGGGATTTATTCTTTTGTATGTTTGTATTTGTGGTGTATGTACTGTACTGCATGCTTTTGG GTGTCTCTTTCTTCTACGTGGTGTAGTATGCCGTATGCGTATGCTTAAATTTTTATTTAGTTCGGTAAAAATCTAACCCT TCCCATATTTTTCCTTTTAATTTTCCAGTGTCGGGAAGTCAACTCTCTTGACAATGTTAACAGGCACACATTCAGAAGCT GCATCTTATGAGTTCACGACTCTGACCTGCATCCCTGGGATTATACATTATAATGATACTAAAATTCAGTTGCTTGATCT TCCTGGAATTATTGAGGGTGCTTCTGAAGGCAAGGGACGTGGGAGACAGGTAAAACTAAAATTACTTATTTTTATCATTC CTATAGCACGTTTTAGGGTCTTTTTGCACTTACAAATTGATAATCAGTTTGCACATAATGCTGTTATTATATTTCCTAAT ACATCAGAGGTAACTTGTGAATAGAATATGATGATTGGTTGTTTTTCACTGATTGCTTTGGGAAACCTGGCCTTTTCATT ATTAACCTTGCAAGTTTTTTTGTGTGAATGTTCTCTCAGGTTATTGCTGTTGCTAAATCTTCGGACATAGTGCTGATGGT TCTTGATGCCTCCAAAGTAAGTGTCTTTTGGCATTTTCTGATATCTGTCACTTTATGTTGTTGGTATTGCTAGTTGATAA GATGATCTGTTGGTTGTTGCTTTAAATTACTATTATTATAACTAGTGACTAGGGGTGATAAGTAGATAAGATATTGTCAT TAAAGACATCCTTCAAACAGGCCCGGTGACAAAACTCGTTTCTTTTTCATTAAGTAATATTACTCACTGTTACCTATTAT TTTTGTTTGTAAATATAAATTTACTTGCAAAGCTGTTATCTGATTGCATGACATCATAATATTACTGGATGATGTTTCTG ACTAACTTCATGCTCCAGTTGGTGAGTTAATGTGGGTTCATAATTTCCTTTTCCTATTTTCTTTATATTCCTTTTATCAC TTCTATTGTTCCAGGCTTCCCACTAATGTTATCATACCACAATGATTGTGTGTCTGCTTACATTTTATGGTCCCTTTTCT GCATCTGTGTTGCTTGTGGAATTGCTTCATACAGTGTTTGGCCAATATACTAGTAGTGTTTATTTGATTGGAAATTGCTA AACTTTCAATTTCCTTGCCACGTTTTTTTTGTCAGAGTGAGGGTCATAGGCAAATATTAACCAAGGAGCTTGAGGCTGTG GGCTTGCGTTTAAACCAGCGACCACCTCAAGTAAGTTTGTGCCCCAAAGGATATTTTGGGGTACATGACACGAAGCATAT ATTTTATATATCGATCTATGTTGGATGTTTATATTTTTCTCCTCACTTTCTCATGAACTCAGAGCTTTGTATTTCTTGGC AGATATATTTTAAAAAGAAAAAGACAGGAGGCATTTCATTCAACAGTACTATGCCTTTGACTCATGTAGATGAGAAGCTT TGCTATCAGATTCTGCATGAGTACAAAATTCACAATGCAGAGGTATAGAACAAACTTTAAAGTTATATCAGTTGTAATTC ATTTTCATGAACCGTTAATTATGGGATATTATCAGTATGCAGTTACAGTTGCAAATGTTAATTGCATTTTTTACTACTGC CATAGTTTGTCTAAATATGATGGAGCAAGTGTAGTGACTTGGGATGCTTGGCTGGTTGGTGATGTAAGCATGCTATCTTT TGCATATAATATGATTTTATAACTTGTAACAGTCAATGGCCAACTCTTATAAAACCTTAGAAAGAAGCTCTTTTAATGTC AGATTTTATGTAAAGTGAGAAAGTGATGGTGTATCCATGCTTAATTGAATCAAAAGTGCACTGTAATCTTAACTCAAGAA ATGAAAGGGTGGGTACACCCTCTTCCTCACATTATGTACAAGTCCACTTTATAGGAGATTTGTCCAAAGCCTTTGTCTGT TATAGAAAAGCCCAAGAATGACTTCATATATCTATCTTAAAGCCAAAAGCATTAGTCAAAGACCAAAGATGTACAAGTCC ACTTTATAGGAGATTTGTCCAAAGCCTTTTCCGATTGAAACGTGCTCAGTTTCACAGGCTTGCATGTTCTGAAAATTAGT TTTATCATAAGGAGTGGCAGAAACAAGGAACATACTCCTAATCATTTCATTATAGAGGCCTTTGATACTGTGTCAAATAT TGCTCACCTTAAAGCCAAAAGCATTAGTCAAAGACCAAAGAATGATTTTGTATATTTAACATTCGCTGTAAAATCTAAGT ATTTTTCATATGACGAGGTCATCATTGAGCATTCAATGTCATAGCTTTCTTTCTGAAATGAGGAGAAAAATGTCTGGAGA AAAATTAAAGTGGAAATGAGCAGTAATTTACACTCTTGTTTAATCATGTTATCAACAGAAGTTACTTTGTTGCCTGAAAA CAATTCACGGATTCCTTATTTGTTATTTGATTTTCTTCTGCATTTTGTTTGCATGGTTCTCTTTCACGTCTATCTGAGGC TAAGTGCATCTGTATTGCTGAGTTTGATCCTTGATGTCACTTGTTCCTGTTCATTAACGTCCTTCCAAGTAGAATTGGAC TTTCATGTTGGCGGAAACTATGATTATGAAGATCAGTCTGGCATTTTTCTGTGAATGAGAAATCCTAGCAAAATTCTTTT GAACACGCTCTCCAGCACAGCACACTCAATGTGATTGGTTGATTTTTTAAAAAGTTAACATATTTCTCTCATTTCTTAAA ATAATAGAACACTTTTTAAAAAATAAACCAATCATACTGAGTGTGTTGAAGAGTGTCCAAAAGAGTGTATTGATAGCACT CCTTTTCTGTGAATATAAAGTATCTTGTCTAGAGTTGTCATGTTGAATTTTGTAGTTTTCCTCATTACATCTGATAGATT CCGTAATTTTCCTTCTTACAATTACTATAATATAATCAGGTCTCTGTTTACCGCTATTTTCTACCTATATCAAGGGGTCA ACTGACAACTTCAATTTCAGATTCTTTTCCGTGAGGATGCCACAGTGGATGATCTCATTGATGTCATTGAAGGAAATCGT AAATACATGAAGTGTGTATATGTCTACAACAAGATAGATGTTGTTGGTATTGATGATGTGGACAGATTAGCCCGTCAACC TAATTCTGTTGTCATTAGTTGCAATTTGAAGGTAGTTTCATACTTTCAGTGCCAACAGAAGAATACAAGATACCATGAAG TTTTAGTGATTTTTTCAAAATATTCATAAATTCATGTTTTATGAACATTTTTTTTGTATATAGTAACACATAATTTTGTG TTTTTGTGAACAGCTGAACTTAGACAGACTACTTTCGAGGATGTGGGATGAAATGGGTCTGGTTAGAGTTTATACAAAAC CTCAAGGCCAGCAGCCTGATTTCGCTGAGCCTGTGGTTTTATCTGCTGTATGTTGTCTTATCATTATGCTTATAATAAAC AGCTGTCCCTTATTCTATTTTACTTTTTTGAAAACCTTTAGCTTTTTTGTTGTGTTTTTATATTCTTCCAATCCATCAGA GTCATCACTTTCTCTGGCAAATTGTTTTAGGATAGAGGTGGCTGCACTGTAGAAGACTTCTGCAACCACATACACAGAAG TTTGGTGAAGGACGTGAAGTATGTGCTGGTCTGGGGAACAAGTGCTAGGCACTACCCACAACATTGTGGCCTTGCTCATT ATCTTAATGATGAGGATGTGGTTCAGATTGTCAAGAAAAAGGTACCCTTCATCTTGTTTTGTGTCGTGTGACTGATCGGT GTATCACTGTGTTCGAACTTTGAATTCCATGTCGTTTACTTGTTACTGGCTGAAAATGCTTTACATTTGTGATAATGAGA GATTGAAACAATGATGTGTGTCCTTCAGGAAAGAGATGAGGGAGGAAGGGGTCGATTCAAGTCGCATTCCAATGCTCCTG CGCGGATATCTGACAGAGAGAAGAAGGCTCCACTGAAGACATAA 

CDS sequence (LotjaGi3g1v0416000.4) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGGTATCATTGAGAGGATCAAAGAAATTGAAGCCGAAATGGCTCGAACCCAGAAAAACAAAGCCACAGAGTATCATCT TGGGCAGCTCAAGGCCAAGATAGCAAAACTTAGGACACAGTTGCTGGAGCCTCCAAAAGGTTCTAGTGGAGGTGGAGAGG GATTTGAAGTTACGAAATTCGGCCATGGACGTGTTGCACTGATTGGATTTCCAAGTGTCGGGAAGTCAACTCTCTTGACA ATGTTAACAGGCACACATTCAGAAGCTGCATCTTATGAGTTCACGACTCTGACCTGCATCCCTGGGATTATACATTATAA TGATACTAAAATTCAGTTGCTTGATCTTCCTGGAATTATTGAGGGTGCTTCTGAAGGCAAGGGACGTGGGAGACAGGTTA TTGCTGTTGCTAAATCTTCGGACATAGTGCTGATGGTTCTTGATGCCTCCAAAAGTGAGGGTCATAGGCAAATATTAACC AAGGAGCTTGAGGCTGTGGGCTTGCGTTTAAACCAGCGACCACCTCAAATATATTTTAAAAAGAAAAAGACAGGAGGCAT TTCATTCAACAGTACTATGCCTTTGACTCATGTAGATGAGAAGCTTTGCTATCAGATTCTGCATGAGTACAAAATTCACA ATGCAGAGATTCTTTTCCGTGAGGATGCCACAGTGGATGATCTCATTGATGTCATTGAAGGAAATCGTAAATACATGAAG TGTGTATATGTCTACAACAAGATAGATGTTGTTGGTATTGATGATGTGGACAGATTAGCCCGTCAACCTAATTCTGTTGT CATTAGTTGCAATTTGAAGCTGAACTTAGACAGACTACTTTCGAGGATGTGGGATGAAATGGGTCTGGTTAGAGTTTATA CAAAACCTCAAGGCCAGCAGCCTGATTTCGCTGAGCCTGTGGTTTTATCTGCTGATAGAGGTGGCTGCACTGTAGAAGAC TTCTGCAACCACATACACAGAAGTTTGGTGAAGGACGTGAAGTATGTGCTGGTCTGGGGAACAAGTGCTAGGCACTACCC ACAACATTGTGGCCTTGCTCATTATCTTAATGATGAGGATGTGGTTCAGATTGTCAAGAAAAAGGAAAGAGATGAGGGAG GAAGGGGTCGATTCAAGTCGCATTCCAATGCTCCTGCGCGGATATCTGACAGAGAGAAGAAGGCTCCACTGAAGACATAA 

Protein sequence (LotjaGi3g1v0416000.4) extracted from Lotus japonicus Gifu v1.2 Proteins.

MGIIERIKEIEAEMARTQKNKATEYHLGQLKAKIAKLRTQLLEPPKGSSGGGEGFEVTKFGHGRVALIGFPSVGKSTLLT MLTGTHSEAASYEFTTLTCIPGIIHYNDTKIQLLDLPGIIEGASEGKGRGRQVIAVAKSSDIVLMVLDASKSEGHRQILT KELEAVGLRLNQRPPQIYFKKKKTGGISFNSTMPLTHVDEKLCYQILHEYKIHNAEILFREDATVDDLIDVIEGNRKYMK CVYVYNKIDVVGIDDVDRLARQPNSVVISCNLKLNLDRLLSRMWDEMGLVRVYTKPQGQQPDFAEPVVLSADRGGCTVED FCNHIHRSLVKDVKYVLVWGTSARHYPQHCGLAHYLNDEDVVQIVKKKERDEGGRGRFKSHSNAPARISDREKKAPLKT 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER 1 398 398 3.2E-268
PANTHER 1 398 398 3.2E-268
Gene3D 51 185 135 1.5E-35
ProSiteProfiles 63 288 226 52.892
CDD 64 295 232 3.09498E-157
SUPERFAMILY 64 303 240 2.88E-55
Pfam 64 178 115 5.4E-21
TIGRFAM 64 213 150 5.0E-20
PRINTS 65 85 21 3.6E-30
PRINTS 86 104 19 3.6E-30
PRINTS 113 128 16 3.6E-30
ProSitePatterns 115 128 14 -
PRINTS 130 148 19 3.6E-30
Pfam 184 289 106 1.2E-42
Gene3D 281 373 93 1.2E-34
SUPERFAMILY 284 366 83 2.88E-14
CDD 287 367 81 1.9453E-46
ProSiteProfiles 288 366 79 17.932
Pfam 290 366 77 2.0E-23
MobiDBLite 368 399 32 -

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function GTP binding Interacting selectively and non-covalently with GTP, guanosine triphosphate.

Expression data

Expression pattern

Expression pattern of LotjaGi3g1v0416000.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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