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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0416000 |
| Transcript ID | LotjaGi3g1v0416000.1 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | GTPase Obg; TAIR: AT1G72660.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|Q9CAI1|DRG2_ARATH Developmentally-regulated G-protein 2; TrEMBL-Plants: tr|I1KHA2|I1KHA2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0416000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:82175605..82182465) extracted from Lotus japonicus Gifu genome v1.2.
GCCAGAAAGACATACATATGTAAACTCTAAAGAGTAAAGTGGCCCAATGCCATGACCATCTAAAATCTAGCCCTTAACAT CAGTTCAATTTTCTCAGACCTACACTCTTCTCTCTCCCTCTCTCTCTGCAATCTCGTGTGTGTGTGTGTTCCGGTGAGCT AGCTAGGTAGCTCAGTCTGCTCAATTGCTATGGAAAATTGTCCCTGTTCAACTTATCTGATCACCCTTTTGTTGTTTGCA GGCAAAACTCAGCGAAAATGGGTATCATTGAGAGGATCAAAGAAATTGAAGCCGAAATGGCTCGAACCCAGAAAAACAAA GCCACAGGTACCATTCCTCCTGCATCTATTGATTTTCAGTATAATTGGATTGGAATAACCATCAAAATTTCATAAAAAAG TGTTTTTTTTTTGTTGTGGGTAGTTTTTGTTATTTTTCCCAAAATCAATTTTTTGCTAGCCTTATTTGAATTTGTTTATT GTGCAGAGTATCATCTTGGGCAGCTCAAGGCCAAGATAGCAAAACTTAGGACACAGTTGCTGGAGCCTCCAAAAGTATGC ACAGATTTTTTATTTTTATAATTTTTTTGTTCCATGATTGTGATTGCTATAGTTTCAAAAAAAAATGATTGTGATTGCTA TTAATGTCATTATTTTTAATTTACTCTTCAATGTTCTGTTTCCCTTCTGATGATTGATGCAAGTTTTGATTTCATGGATA TGTTTTTTTTTTTCTTTGGATTGGCACTTTTCTTTTATAATTTGGTCTGTTTTTAATAAGGGTTGTCGAAATAACCATAG GCGAAGTTTGGGTTAAATCACCCTAGTTCTAGGTGGAAAAGTGATATTTAAGATAAGTGGGCTAGAAATTTCATAATTTA TCATTTATCTTAAATGTCGTTGGGCTAGAAATTTCATAATTTATCATTTAACTTAAATGTGGTTGGTCCACCCAGGACTA GGGTGATTTAACCCAAACTTTGTCTAGGAGCCCCTTTAAATAATATAAGTTCATCTGTAAGTTTCATGCATCATTCTTTT CTTTTTTCCAAAGAATGAGAAACCTGAATGCATGAGCAAGAATGATTCTGCATATTTTAGGATTGGGTTTTTTACACTTA TTTAGAGTATGAAGTCTGTTTTAATATCTGTGGATTAGGAACTGAGGAGGGGATTTGCCAGATTGATTCTCAGACCCGGA ACTTTTTATTTTCCGTTTTAGTTGTATTGATGTTTGAGCTACTGAAGAATTTATGCTCCTGTTTGACCCTAAACTTCATA AGCATTGTAGCATACATGTTTAAAACAGAGAACAGTAACACACACACATATATTGTTTGTGGGGGGGGGGGGGTTAATGG ATACAGAGTTATCTAATCATTTTGAAGGCTCTGGCAGGACGATGGAGAATAAAATTTTATGATAATATTGCTGTTTTTTT GGGATCATGGTGTAGAGAACAATGGTTTTCGAAATAACACACATATATTCTTCCCCTTAATTTTTCAGGATCAATGGTTT TCTTGCCTTCTTAATATGTGGCTAGCACACCAATTTTTTAGTGGTGTTTCTCTTATTCATTTGTAAAGGCCTTCATTTGT TTTTTCTGATGAATTCTTATAGTATTTTGATCTGTTATAAGTATTGAAATTTAGGAATTCAGTTAGTGAATCTTTTGCAG TAATTGTTTTTGGTTCAACATGCGAAGTTTCTTAATTATTTGTCTGCCAAAACTTGCTATCCTTATGTACACTTTCTTAC AAGGTGGAGTATCTTGGAAAATTATTTAATAGGGTTCTAGTGGAGGTGGAGAGGGATTTGAAGTTACGAAATTCGGCCAT GGACGTGTTGCACTGATTGGATTTCCAAGGTCTGCGTTCTAAAACGAATCCCCCAAATCAATTTCTCTAATCCTTTATTT ATTCAATACTATTATTTTAATGGATTTAAGTTCTATTGGGATTTATTCTTTTGTATGTTTGTATTTGTGGTGTATGTACT GTACTGCATGCTTTTGGGTGTCTCTTTCTTCTACGTGGTGTAGTATGCCGTATGCGTATGCTTAAATTTTTATTTAGTTC GGTAAAAATCTAACCCTTCCCATATTTTTCCTTTTAATTTTCCAGTGTCGGGAAGTCAACTCTCTTGACAATGTTAACAG GCACACATTCAGAAGCTGCATCTTATGAGTTCACGACTCTGACCTGCATCCCTGGGATTATACATTATAATGATACTAAA ATTCAGTTGCTTGATCTTCCTGGAATTATTGAGGGTGCTTCTGAAGGCAAGGGACGTGGGAGACAGGTAAAACTAAAATT ACTTATTTTTATCATTCCTATAGCACGTTTTAGGGTCTTTTTGCACTTACAAATTGATAATCAGTTTGCACATAATGCTG TTATTATATTTCCTAATACATCAGAGGTAACTTGTGAATAGAATATGATGATTGGTTGTTTTTCACTGATTGCTTTGGGA AACCTGGCCTTTTCATTATTAACCTTGCAAGTTTTTTTGTGTGAATGTTCTCTCAGGTTATTGCTGTTGCTAAATCTTCG GACATAGTGCTGATGGTTCTTGATGCCTCCAAAGTAAGTGTCTTTTGGCATTTTCTGATATCTGTCACTTTATGTTGTTG GTATTGCTAGTTGATAAGATGATCTGTTGGTTGTTGCTTTAAATTACTATTATTATAACTAGTGACTAGGGGTGATAAGT AGATAAGATATTGTCATTAAAGACATCCTTCAAACAGGCCCGGTGACAAAACTCGTTTCTTTTTCATTAAGTAATATTAC TCACTGTTACCTATTATTTTTGTTTGTAAATATAAATTTACTTGCAAAGCTGTTATCTGATTGCATGACATCATAATATT ACTGGATGATGTTTCTGACTAACTTCATGCTCCAGTTGGTGAGTTAATGTGGGTTCATAATTTCCTTTTCCTATTTTCTT TATATTCCTTTTATCACTTCTATTGTTCCAGGCTTCCCACTAATGTTATCATACCACAATGATTGTGTGTCTGCTTACAT TTTATGGTCCCTTTTCTGCATCTGTGTTGCTTGTGGAATTGCTTCATACAGTGTTTGGCCAATATACTAGTAGTGTTTAT TTGATTGGAAATTGCTAAACTTTCAATTTCCTTGCCACGTTTTTTTTGTCAGAGTGAGGGTCATAGGCAAATATTAACCA AGGAGCTTGAGGCTGTGGGCTTGCGTTTAAACCAGCGACCACCTCAAGTAAGTTTGTGCCCCAAAGGATATTTTGGGGTA CATGACACGAAGCATATATTTTATATATCGATCTATGTTGGATGTTTATATTTTTCTCCTCACTTTCTCATGAACTCAGA GCTTTGTATTTCTTGGCAGATATATTTTAAAAAGAAAAAGACAGGAGGCATTTCATTCAACAGTACTATGCCTTTGACTC ATGTAGATGAGAAGCTTTGCTATCAGATTCTGCATGAGTACAAAATTCACAATGCAGAGGTATAGAACAAACTTTAAAGT TATATCAGTTGTAATTCATTTTCATGAACCGTTAATTATGGGATATTATCAGTATGCAGTTACAGTTGCAAATGTTAATT GCATTTTTTACTACTGCCATAGTTTGTCTAAATATGATGGAGCAAGTGTAGTGACTTGGGATGCTTGGCTGGTTGGTGAT GTAAGCATGCTATCTTTTGCATATAATATGATTTTATAACTTGTAACAGTCAATGGCCAACTCTTATAAAACCTTAGAAA GAAGCTCTTTTAATGTCAGATTTTATGTAAAGTGAGAAAGTGATGGTGTATCCATGCTTAATTGAATCAAAAGTGCACTG TAATCTTAACTCAAGAAATGAAAGGGTGGGTACACCCTCTTCCTCACATTATGTACAAGTCCACTTTATAGGAGATTTGT CCAAAGCCTTTGTCTGTTATAGAAAAGCCCAAGAATGACTTCATATATCTATCTTAAAGCCAAAAGCATTAGTCAAAGAC CAAAGATGTACAAGTCCACTTTATAGGAGATTTGTCCAAAGCCTTTTCCGATTGAAACGTGCTCAGTTTCACAGGCTTGC ATGTTCTGAAAATTAGTTTTATCATAAGGAGTGGCAGAAACAAGGAACATACTCCTAATCATTTCATTATAGAGGCCTTT GATACTGTGTCAAATATTGCTCACCTTAAAGCCAAAAGCATTAGTCAAAGACCAAAGAATGATTTTGTATATTTAACATT CGCTGTAAAATCTAAGTATTTTTCATATGACGAGGTCATCATTGAGCATTCAATGTCATAGCTTTCTTTCTGAAATGAGG AGAAAAATGTCTGGAGAAAAATTAAAGTGGAAATGAGCAGTAATTTACACTCTTGTTTAATCATGTTATCAACAGAAGTT ACTTTGTTGCCTGAAAACAATTCACGGATTCCTTATTTGTTATTTGATTTTCTTCTGCATTTTGTTTGCATGGTTCTCTT TCACGTCTATCTGAGGCTAAGTGCATCTGTATTGCTGAGTTTGATCCTTGATGTCACTTGTTCCTGTTCATTAACGTCCT TCCAAGTAGAATTGGACTTTCATGTTGGCGGAAACTATGATTATGAAGATCAGTCTGGCATTTTTCTGTGAATGAGAAAT CCTAGCAAAATTCTTTTGAACACGCTCTCCAGCACAGCACACTCAATGTGATTGGTTGATTTTTTAAAAAGTTAACATAT TTCTCTCATTTCTTAAAATAATAGAACACTTTTTAAAAAATAAACCAATCATACTGAGTGTGTTGAAGAGTGTCCAAAAG AGTGTATTGATAGCACTCCTTTTCTGTGAATATAAAGTATCTTGTCTAGAGTTGTCATGTTGAATTTTGTAGTTTTCCTC ATTACATCTGATAGATTCCGTAATTTTCCTTCTTACAATTACTATAATATAATCAGGTCTCTGTTTACCGCTATTTTCTA CCTATATCAAGGGGTCAACTGACAACTTCAATTTCAGATTCTTTTCCGTGAGGATGCCACAGTGGATGATCTCATTGATG TCATTGAAGGAAATCGTAAATACATGAAGTGTGTATATGTCTACAACAAGATAGATGTTGTTGGTATTGATGATGTGGAC AGATTAGCCCGTCAACCTAATTCTGTTGTCATTAGTTGCAATTTGAAGGTAGTTTCATACTTTCAGTGCCAACAGAAGAA TACAAGATACCATGAAGTTTTAGTGATTTTTTCAAAATATTCATAAATTCATGTTTTATGAACATTTTTTTTGTATATAG TAACACATAATTTTGTGTTTTTGTGAACAGCTGAACTTAGACAGACTACTTTCGAGGATGTGGGATGAAATGGGTCTGGT TAGAGTTTATACAAAACCTCAAGGCCAGCAGCCTGATTTCGCTGAGCCTGTGGTTTTATCTGCTGTATGTTGTCTTATCA TTATGCTTATAATAAACAGCTGTCCCTTATTCTATTTTACTTTTTTGAAAACCTTTAGCTTTTTTGTTGTGTTTTTATAT TCTTCCAATCCATCAGAGTCATCACTTTCTCTGGCAAATTGTTTTAGGATAGAGGTGGCTGCACTGTAGAAGACTTCTGC AACCACATACACAGAAGTTTGGTGAAGGACGTGAAGTATGTGCTGGTCTGGGGAACAAGTGCTAGGCACTACCCACAACA TTGTGGCCTTGCTCATTATCTTAATGATGAGGATGTGGTTCAGATTGTCAAGAAAAAGGTACCCTTCATCTTGTTTTGTG TCGTGTGACTGATCGGTGTATCACTGTGTTCGAACTTTGAATTCCATGTCGTTTACTTGTTACTGGCTGAAAATGCTTTA CATTTGTGATAATGAGAGATTGAAACAATGATGTGTGTCCTTCAGGAAAGAGATGAGGGAGGAAGGGGTCGATTCAAGTC GCATTCCAATGCTCCTGCGCGGATATCTGACAGAGAGAAGAAGGCTCCACTGAAGACATAATTTTGTATGGCACTACCAA TGTTTTCATTGATTTGCCTGGTGGATGGGAAAAATGACTAGAGGCTGGATGATAAATCCAAAAGCAGAGATGGTCTTTTC TTAATTCCTCTTCCAATATGAGATTGAATGCTCCTCCTTTGTGCTTTACTAAGGAGGGCACCTGTGTTTTGGTCACCCAT GTGTTGTAATTTTTTAACCCTCTTATAATCTTTGTTAGTCTATGAAGTCGGCATCAATAACATGAGTGGAAATAGAAAGG AAACGTGCATTGCATCTTCAGAATTTACTGTCATTGTTTATCGTGATTGCCTTTCTCCTTATACTGCACCATTCATTTGA AAACCTTAATCTGTCTTTGTCTCTACACCCTCGAATATCAGAATATAACAGGGCCACAAATTAAAGAGAGAAAGAAATGG AATTGTTATGTGGAAGAAATAGTTCCAATTAGGATATAGATCGTACGAGAATACAGGGTTCAACATAAGCTTGTTTCTGT TGTGTTCGCTTTCTAGAACAAGCAAGCGATTTTTCTGTTATTTTATATGAAGTAGTAGGTTATTTTTCATTTCATAGCCA TGAGTGCTTGCATTAAAATTGCGATCCTCTTATATAATGTCATCTTAAATTTCGTGTCTATTTGGTCCTTGTTAAGGGAA GGAAAAAACTTGAAAAGCCATTTCAAAGGCTGGATCATAAAGTAAGATCAAAAGCCAAATTCGAAGAAGCATGCTCATGG AGGGGTGATTTGAATAAGAGGGAAGCAACATGGTCAAGAAGTGTTATGTCAGTTCTAAACTACATTTATGGGATTCATAA GTTAAAGTTAGTGTCTTCTTGCTCAAACATGTAGGTAATTTATGGAATTCCTAAGTTAAAG
CDS sequence (LotjaGi3g1v0416000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTATCATTGAGAGGATCAAAGAAATTGAAGCCGAAATGGCTCGAACCCAGAAAAACAAAGCCACAGAGTATCATCT TGGGCAGCTCAAGGCCAAGATAGCAAAACTTAGGACACAGTTGCTGGAGCCTCCAAAAGGTTCTAGTGGAGGTGGAGAGG GATTTGAAGTTACGAAATTCGGCCATGGACGTGTTGCACTGATTGGATTTCCAAGTGTCGGGAAGTCAACTCTCTTGACA ATGTTAACAGGCACACATTCAGAAGCTGCATCTTATGAGTTCACGACTCTGACCTGCATCCCTGGGATTATACATTATAA TGATACTAAAATTCAGTTGCTTGATCTTCCTGGAATTATTGAGGGTGCTTCTGAAGGCAAGGGACGTGGGAGACAGGTTA TTGCTGTTGCTAAATCTTCGGACATAGTGCTGATGGTTCTTGATGCCTCCAAAAGTGAGGGTCATAGGCAAATATTAACC AAGGAGCTTGAGGCTGTGGGCTTGCGTTTAAACCAGCGACCACCTCAAATATATTTTAAAAAGAAAAAGACAGGAGGCAT TTCATTCAACAGTACTATGCCTTTGACTCATGTAGATGAGAAGCTTTGCTATCAGATTCTGCATGAGTACAAAATTCACA ATGCAGAGATTCTTTTCCGTGAGGATGCCACAGTGGATGATCTCATTGATGTCATTGAAGGAAATCGTAAATACATGAAG TGTGTATATGTCTACAACAAGATAGATGTTGTTGGTATTGATGATGTGGACAGATTAGCCCGTCAACCTAATTCTGTTGT CATTAGTTGCAATTTGAAGCTGAACTTAGACAGACTACTTTCGAGGATGTGGGATGAAATGGGTCTGGTTAGAGTTTATA CAAAACCTCAAGGCCAGCAGCCTGATTTCGCTGAGCCTGTGGTTTTATCTGCTGATAGAGGTGGCTGCACTGTAGAAGAC TTCTGCAACCACATACACAGAAGTTTGGTGAAGGACGTGAAGTATGTGCTGGTCTGGGGAACAAGTGCTAGGCACTACCC ACAACATTGTGGCCTTGCTCATTATCTTAATGATGAGGATGTGGTTCAGATTGTCAAGAAAAAGGAAAGAGATGAGGGAG GAAGGGGTCGATTCAAGTCGCATTCCAATGCTCCTGCGCGGATATCTGACAGAGAGAAGAAGGCTCCACTGAAGACATAA
Protein sequence (LotjaGi3g1v0416000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGIIERIKEIEAEMARTQKNKATEYHLGQLKAKIAKLRTQLLEPPKGSSGGGEGFEVTKFGHGRVALIGFPSVGKSTLLT MLTGTHSEAASYEFTTLTCIPGIIHYNDTKIQLLDLPGIIEGASEGKGRGRQVIAVAKSSDIVLMVLDASKSEGHRQILT KELEAVGLRLNQRPPQIYFKKKKTGGISFNSTMPLTHVDEKLCYQILHEYKIHNAEILFREDATVDDLIDVIEGNRKYMK CVYVYNKIDVVGIDDVDRLARQPNSVVISCNLKLNLDRLLSRMWDEMGLVRVYTKPQGQQPDFAEPVVLSADRGGCTVED FCNHIHRSLVKDVKYVLVWGTSARHYPQHCGLAHYLNDEDVVQIVKKKERDEGGRGRFKSHSNAPARISDREKKAPLKT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 398 | 398 | 3.2E-268 | – | |
| PANTHER | 1 | 398 | 398 | 3.2E-268 | – | |
| Gene3D | 51 | 185 | 135 | 1.5E-35 | – | |
| ProSiteProfiles | 63 | 288 | 226 | 52.892 | ||
| CDD | 64 | 295 | 232 | 3.09498E-157 | – | |
| SUPERFAMILY | 64 | 303 | 240 | 2.88E-55 | ||
| Pfam | 64 | 178 | 115 | 5.4E-21 | ||
| TIGRFAM | 64 | 213 | 150 | 5.0E-20 | ||
| PRINTS | 65 | 85 | 21 | 3.6E-30 | ||
| PRINTS | 86 | 104 | 19 | 3.6E-30 | ||
| PRINTS | 113 | 128 | 16 | 3.6E-30 | ||
| ProSitePatterns | 115 | 128 | 14 | - | ||
| PRINTS | 130 | 148 | 19 | 3.6E-30 | ||
| Pfam | 184 | 289 | 106 | 1.2E-42 | ||
| Gene3D | 281 | 373 | 93 | 1.2E-34 | ||
| SUPERFAMILY | 284 | 366 | 83 | 2.88E-14 | ||
| CDD | 287 | 367 | 81 | 1.9453E-46 | – | |
| ProSiteProfiles | 288 | 366 | 79 | 17.932 | – | |
| Pfam | 290 | 366 | 77 | 2.0E-23 | ||
| MobiDBLite | 368 | 399 | 32 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | GTP binding | Interacting selectively and non-covalently with GTP, guanosine triphosphate. |
Expression pattern of LotjaGi3g1v0416000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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