Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR018022
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

Export options

Download the entire search result as a CSV file.

We have found 17 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.612s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0314119.1
n.a. adenylate isopentenyltransferase [Lotus japonicus] gi|90421410|gb|ABD93934.1| chr0 163907654 163907964 +
2 domain predictions
1 GO term
Lj0g3v0314129.1
n.a. adenylate isopentenyltransferase [Lotus japonicus] gi|90421410|gb|ABD93934.1| chr0 163907919 163908619 +
2 domain predictions
1 GO term
Lj3g3v1063700.1
n.a. PREDICTED: tRNA dimethylallyltransferase 9-like [Glycine max] gi|356549681|ref|XP_003543220.1| chr3 14351187 14359492 +
4 domain predictions
1 GO term
Lj3g3v2996020.1
n.a. tRNA isopentenyltransferase [Lotus japonicus] gi|158702919|gb|ABW77761.1| chr3 37394455 37398119 +
3 domain predictions
1 GO term
Lj3g3v2996020.2
n.a. tRNA isopentenyltransferase [Lotus japonicus] gi|158702919|gb|ABW77761.1| chr3 37394455 37398397 +
4 domain predictions
1 GO term
Lj4g3v2400530.1
n.a. adenylate isopentenyltransferase [Lotus japonicus] gi|90421408|gb|ABD93933.1| chr4 33056328 33058219 -
2 domain predictions
1 GO term
Lj5g3v0962690.1
n.a. adenylate isopentenyltransferase [Lotus japonicus] gi|90421410|gb|ABD93934.1| chr5 14709736 14711716 -
2 domain predictions
1 GO term
Lj5g3v2183860.1
n.a. adenylate isopentenyltransferase [Lotus japonicus] gi|90421406|gb|ABD93932.1| chr5 31734356 31736666 -
2 domain predictions
1 GO term
LotjaGi3g1v0156900.1
n.a. tRNA dimethylallyltransferase; TAIR: AT5G20040.1 isopentenyltransferase 9; Swiss-Prot: sp|Q9C5J6|IPT9_ARATH tRNA dimethylallyltransferase 9; TrEMBL-Plants: tr|I1M325|I1M325_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0156900 LjG1.1_chr3 21455108 21463625 -
4 domain predictions
1 GO term
LotjaGi3g1v0480000.1
n.a. tRNA dimethylallyltransferase; TAIR: AT2G27760.1 tRNAisopentenyltransferase 2; Swiss-Prot: sp|Q9ZUX7|IPT2_ARATH tRNA dimethylallyltransferase 2; TrEMBL-Plants: tr|I3SM43|I3SM43_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0480000 LjG1.1_chr3 89707484 89712192 +
3 domain predictions
1 GO term
LotjaGi3g1v0480000.2
n.a. tRNA dimethylallyltransferase; TAIR: AT2G27760.1 tRNAisopentenyltransferase 2; Swiss-Prot: sp|Q9ZUX7|IPT2_ARATH tRNA dimethylallyltransferase 2; TrEMBL-Plants: tr|I3SM43|I3SM43_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0480000 LjG1.1_chr3 89707484 89712192 +
4 domain predictions
1 GO term
LotjaGi3g1v0480000.3
n.a. tRNA dimethylallyltransferase; TAIR: AT2G27760.1 tRNAisopentenyltransferase 2; Swiss-Prot: sp|Q9ZUX7|IPT2_ARATH tRNA dimethylallyltransferase 2; TrEMBL-Plants: tr|I3SM43|I3SM43_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0480000 LjG1.1_chr3 89707558 89712121 +
3 domain predictions
1 GO term
LotjaGi4g1v0351300.1
n.a. tRNA dimethylallyltransferase; TAIR: AT5G19040.1 isopentenyltransferase 5; Swiss-Prot: sp|Q94ID2|IPT5_ARATH Adenylate isopentenyltransferase 5, chloroplastic; TrEMBL-Plants: tr|Q1W5W4|Q1W5W4_LOTJA Adenylate isopentenyltransferase; Found in the gene: LotjaGi4g1v0351300 LjG1.1_chr4 73009154 73011023 -
2 domain predictions
1 GO term
LotjaGi4g1v0351300.2
n.a. tRNA dimethylallyltransferase; TAIR: AT5G19040.1 isopentenyltransferase 5; Swiss-Prot: sp|Q94ID2|IPT5_ARATH Adenylate isopentenyltransferase 5, chloroplastic; TrEMBL-Plants: tr|Q1W5W4|Q1W5W4_LOTJA Adenylate isopentenyltransferase; Found in the gene: LotjaGi4g1v0351300 LjG1.1_chr4 73009164 73011181 -
2 domain predictions
1 GO term
LotjaGi5g1v0164300.1
n.a. tRNA dimethylallyltransferase; TAIR: AT3G63110.1 isopentenyltransferase 3; Swiss-Prot: sp|Q93WC9|IPT3_ARATH Adenylate isopentenyltransferase 3, chloroplastic; TrEMBL-Plants: tr|Q1W5W3|Q1W5W3_LOTJA Adenylate isopentenyltransferase; Found in the gene: LotjaGi5g1v0164300 LjG1.1_chr5 42040706 42042977 -
2 domain predictions
1 GO term
LotjaGi5g1v0339400.1
n.a. tRNA dimethylallyltransferase; TAIR: AT1G68460.1 isopentenyltransferase 1; Swiss-Prot: sp|Q5GHF7|IPT_HUMLU Adenylate isopentenyltransferase; TrEMBL-Plants: tr|Q1W5W5|Q1W5W5_LOTJA Adenylate isopentenyltransferase; Found in the gene: LotjaGi5g1v0339400 LjG1.1_chr5 65642538 65644514 -
2 domain predictions
1 GO term
LotjaGi6g1v0298900.1
n.a. tRNA dimethylallyltransferase; TAIR: AT5G19040.1 isopentenyltransferase 5; Swiss-Prot: sp|Q94ID2|IPT5_ARATH Adenylate isopentenyltransferase 5, chloroplastic; TrEMBL-Plants: tr|Q1W5W2|Q1W5W2_LOTJA Adenylate isopentenyltransferase; Found in the gene: LotjaGi6g1v0298900 LjG1.1_chr6 61677585 61679953 +
2 domain predictions
1 GO term