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IPR018022

Source: InterPro

Description

IPR018022 is a IPP transferase.

<p>This entry represents tRNA dimethylallyltransferase, also known as delta(2)-isopentenylpyrophosphate transferase, IPP transferral and 2-methylthio-N6-isopentyladenosine tRNA modification enzyme. This enzyme catalyses the first step in the modification of an adenosine near the anticodon to 2-methylthio-N6-isopentyladenosine [[cite:PUB00089916]].</p> <p>Plants have two classes of isopentenyltransferases (IPTs): ATP/ADP isopentenyltransferases (IPT1, 3, 4-8) and tRNA IPTs (IPT2 and 9) [[cite:PUB00075638]]. Both types are included in this family.</p>

This description is obtained from EB-eye REST.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0008033
Biological process TRNA processing The process in which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group.
Subterm of

Associated Lotus transcripts 17

Transcript Name Description Predicted domains Domain count
Lj0g3v0314119.1
– Adenylate isopentenyltransferase [Lotus japonicus] gi|90421410|gb|ABD93934.1|
Domains
7
Lj0g3v0314129.1
– Adenylate isopentenyltransferase [Lotus japonicus] gi|90421410|gb|ABD93934.1|
Domains
5
Lj3g3v1063700.1
– PREDICTED: tRNA dimethylallyltransferase 9-like [Glycine max] gi|356549681|ref|XP_003543220.1|
Domains
10
Lj3g3v2996020.1
– TRNA isopentenyltransferase [Lotus japonicus] gi|158702919|gb|ABW77761.1|
Domains
9
Lj3g3v2996020.2
– TRNA isopentenyltransferase [Lotus japonicus] gi|158702919|gb|ABW77761.1|
Domains
11
Lj4g3v2400530.1
– Adenylate isopentenyltransferase [Lotus japonicus] gi|90421408|gb|ABD93933.1|
Domains
9
Lj5g3v0962690.1
– Adenylate isopentenyltransferase [Lotus japonicus] gi|90421410|gb|ABD93934.1|
Domains
8
Lj5g3v2183860.1
– Adenylate isopentenyltransferase [Lotus japonicus] gi|90421406|gb|ABD93932.1|
Domains
8
LotjaGi3g1v0156900.1
– TRNA dimethylallyltransferase; TAIR: AT5G20040.1 isopentenyltransferase 9; Swiss-Prot: sp|Q9C5J6|IPT9_ARATH tRNA dimethylallyltransferase 9; TrEMBL-Plants: tr|I1M325|I1M325_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0156900
Domains
9
LotjaGi3g1v0480000.1
– TRNA dimethylallyltransferase; TAIR: AT2G27760.1 tRNAisopentenyltransferase 2; Swiss-Prot: sp|Q9ZUX7|IPT2_ARATH tRNA dimethylallyltransferase 2; TrEMBL-Plants: tr|I3SM43|I3SM43_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0480000
Domains
11
LotjaGi3g1v0480000.2
– TRNA dimethylallyltransferase; TAIR: AT2G27760.1 tRNAisopentenyltransferase 2; Swiss-Prot: sp|Q9ZUX7|IPT2_ARATH tRNA dimethylallyltransferase 2; TrEMBL-Plants: tr|I3SM43|I3SM43_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0480000
Domains
14
LotjaGi3g1v0480000.3
– TRNA dimethylallyltransferase; TAIR: AT2G27760.1 tRNAisopentenyltransferase 2; Swiss-Prot: sp|Q9ZUX7|IPT2_ARATH tRNA dimethylallyltransferase 2; TrEMBL-Plants: tr|I3SM43|I3SM43_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0480000
Domains
11
LotjaGi4g1v0351300.1
– TRNA dimethylallyltransferase; TAIR: AT5G19040.1 isopentenyltransferase 5; Swiss-Prot: sp|Q94ID2|IPT5_ARATH Adenylate isopentenyltransferase 5, chloroplastic; TrEMBL-Plants: tr|Q1W5W4|Q1W5W4_LOTJA Adenylate isopentenyltransferase; Found in the gene: LotjaGi4g1v0351300
Domains
10
LotjaGi4g1v0351300.2
– TRNA dimethylallyltransferase; TAIR: AT5G19040.1 isopentenyltransferase 5; Swiss-Prot: sp|Q94ID2|IPT5_ARATH Adenylate isopentenyltransferase 5, chloroplastic; TrEMBL-Plants: tr|Q1W5W4|Q1W5W4_LOTJA Adenylate isopentenyltransferase; Found in the gene: LotjaGi4g1v0351300
Domains
10
LotjaGi5g1v0164300.1
– TRNA dimethylallyltransferase; TAIR: AT3G63110.1 isopentenyltransferase 3; Swiss-Prot: sp|Q93WC9|IPT3_ARATH Adenylate isopentenyltransferase 3, chloroplastic; TrEMBL-Plants: tr|Q1W5W3|Q1W5W3_LOTJA Adenylate isopentenyltransferase; Found in the gene: LotjaGi5g1v0164300
Domains
9
LotjaGi5g1v0339400.1
– TRNA dimethylallyltransferase; TAIR: AT1G68460.1 isopentenyltransferase 1; Swiss-Prot: sp|Q5GHF7|IPT_HUMLU Adenylate isopentenyltransferase; TrEMBL-Plants: tr|Q1W5W5|Q1W5W5_LOTJA Adenylate isopentenyltransferase; Found in the gene: LotjaGi5g1v0339400
Domains
9
LotjaGi6g1v0298900.1
– TRNA dimethylallyltransferase; TAIR: AT5G19040.1 isopentenyltransferase 5; Swiss-Prot: sp|Q94ID2|IPT5_ARATH Adenylate isopentenyltransferase 5, chloroplastic; TrEMBL-Plants: tr|Q1W5W2|Q1W5W2_LOTJA Adenylate isopentenyltransferase; Found in the gene: LotjaGi6g1v0298900
Domains
10

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
cd18032 CDD 1 5.88