Domain Predictions — View

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G3DSA:1.10.260.40

Source: Gene3D

Description

No description is available for this domain.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on April 27, 2020, while the GO metadata was last updated on April 27, 2020.

GO term	Namespace	Name	Definition	Relationships
GO:0003677 View details of GO:0003677 AmiGO InterPro QuickGO	Molecular function	DNA binding	Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).	Subterm of GO:0003676

Associated Lotus transcripts 12

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0100629.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: multiprotein-bridging factor 1a-like [Fragaria vesca subsp]. vesca] gi\|470134727\|ref\|XP_004303190.1\|	Domains G3DSA:1.10.260.40 IPR001387 IPR010982 PF01381 PS50943 PTHR10245 PTHR10245:SF33 SM00530 SSF47413 cd00093	10
Lj0g3v0113449.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: multiprotein-bridging factor 1b-like [Cicer arietinum] gi\|502083808\|ref\|XP_004487571.1\|	Domains G3DSA:1.10.260.40 IPR001387 IPR010982 IPR013729 PF01381 PF08523 PS50943 PTHR10245 PTHR10245:SF33 SM00530 SSF47413 cd00093 mobidb-lite	13
Lj1g3v0246870.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Ethylene-responsive transciptional coactivator-like protein [Retama raetam] gi\|19225065\|gb\|AAL32037.2\|AF439278_1	Domains Coil G3DSA:1.10.260.40 IPR001387 IPR010982 IPR013729 PF01381 PF08523 PS50943 PTHR10245 PTHR10245:SF33 SM00530 SSF47413 cd00093 mobidb-lite	14
Lj1g3v0775750.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Ethylene-responsive transciptional coactivator-like protein [Retama raetam] gi\|19225065\|gb\|AAL32037.2\|AF439278_1	Domains G3DSA:1.10.260.40 IPR001387 IPR010982 PF01381 PTHR10245 PTHR10245:SF33 SSF47413 cd00093	8
Lj1g3v1318050.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Ethylene-responsive transciptional coactivator-like protein [Retama raetam] gi\|19225065\|gb\|AAL32037.2\|AF439278_1	Domains G3DSA:1.10.260.40 IPR001387 IPR010982 PF01381 PTHR10245 PTHR10245:SF33 SSF47413 cd00093	8
Lj2g3v0777060.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Ethylene-responsive transciptional coactivator-like protein [Retama raetam] gi\|19225065\|gb\|AAL32037.2\|AF439278_1	Domains Coil G3DSA:1.10.260.40 IPR001387 IPR010982 IPR013729 PF01381 PF08523 PS50943 PTHR10245 PTHR10245:SF33 SM00530 SSF47413 cd00093 mobidb-lite	14
Lj4g3v2743020.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Ethylene-responsive transciptional coactivator-like protein [Retama raetam] gi\|19225065\|gb\|AAL32037.2\|AF439278_1	Domains Coil G3DSA:1.10.260.40 IPR001387 IPR010982 IPR013729 PF01381 PF08523 PS50943 PTHR10245 PTHR10245:SF33 SM00530 SSF47413 cd00093 mobidb-lite	14
Lj6g3v0025640.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: cyanate hydratase-like [Cicer arietinum] gi\|502123007\|ref\|XP_004497968.1\|	Domains G3DSA:1.10.260.40 G3DSA:3.30.1160.10 IPR003712 IPR008076 IPR010982 MF_00535 PF02560 PIRSF001263 PR01693 PTHR34186 PTHR34186:SF1 SM01116 SSF47413 SSF55234 TIGR00673 cd00093	16
LotjaGi2g1v0214300.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Multiprotein-bridging factor, putative; TAIR: AT3G24500.1 multiprotein bridging factor 1C; Swiss-Prot: sp\|Q9LV58\|MBF1C_ARATH Multiprotein-bridging factor 1c; TrEMBL-Plants: tr\|Q8S4Q2\|Q8S4Q2_9FABA Ethylene-responsive transciptional coactivator-like protein; Found in the gene: LotjaGi2g1v0214300	Domains Coil G3DSA:1.10.260.40 IPR001387 IPR010982 IPR013729 PF01381 PF08523 PS50943 PTHR10245 PTHR10245:SF71 SM00530 SSF47413 cd00093 mobidb-lite	14
LotjaGi3g1v0240200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Multiprotein-bridging factor, putative; TAIR: AT2G42680.1 multiprotein bridging factor 1A; Swiss-Prot: sp\|Q9SJI8\|MBF1A_ARATH Multiprotein-bridging factor 1a; TrEMBL-Plants: tr\|I3T5E9\|I3T5E9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0240200	Domains G3DSA:1.10.260.40 IPR001387 IPR010982 IPR013729 PF01381 PF08523 PS50943 PTHR10245 PTHR10245:SF114 SM00530 SSF47413 cd00093 mobidb-lite	13
LotjaGi3g1v0252000.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Multiprotein-bridging factor, putative; TAIR: AT2G42680.1 multiprotein bridging factor 1A; Swiss-Prot: sp\|Q9SJI8\|MBF1A_ARATH Multiprotein-bridging factor 1a; TrEMBL-Plants: tr\|A0A151RR76\|A0A151RR76_CAJCA Multiprotein-bridging factor 1b; Found in the gene: LotjaGi3g1v0252000	Domains G3DSA:1.10.260.40 IPR001387 IPR010982 IPR013729 PF01381 PF08523 PS50943 PTHR10245 PTHR10245:SF114 SM00530 SSF47413 cd00093 mobidb-lite	13
LotjaGi6g1v0004000.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Cyanate hydratase; TAIR: AT3G23490.1 cyanase; Swiss-Prot: sp\|B7FKW7\|CYNS_MEDTR Cyanate hydratase; TrEMBL-Plants: tr\|I3SSK7\|I3SSK7_MEDTR Cyanate hydratase; Found in the gene: LotjaGi6g1v0004000	Domains G3DSA:1.10.260.40 G3DSA:3.30.1160.10 IPR001387 IPR003712 IPR008076 IPR010982 IPR036581 MF_00535 PF02560 PIRSF001263 PR01693 PTHR34186 SM01116 SSF47413 SSF55234 TIGR00673 cd00093 cd00559	18

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
cd00559	CDD	1	8.33