Domain Predictions — View

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G3DSA:3.90.1070.20

Source: Gene3D

Description

No description is available for this domain.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 4

Transcript	Name	Description	Predicted domains	Domain count
LotjaGi3g1v0300900_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	DNA-directed RNA polymerase subunit beta; TAIR: AT5G45140.1 nuclear RNA polymerase C2; Swiss-Prot: sp\|F4KD38\|NRPC2_ARATH DNA-directed RNA polymerase III subunit 2; TrEMBL-Plants: tr\|K7L1D3\|K7L1D3_SOYBN DNA-directed RNA polymerase subunit beta; Found in the gene: LotjaGi3g1v0300900_LC	Domains G3DSA:2.40.270.10 G3DSA:2.40.50.150 G3DSA:3.90.1070.20 G3DSA:3.90.1800.10 IPR007120 IPR007121 IPR007641 IPR007646 IPR007647 IPR014724 IPR015712 IPR037033 NON_CYTOPLASMIC_DOMAIN PF00562 PF04560 PF04566 PF04567 PS01166 PTHR20856 PTHR20856:SF24 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF64484 cd00653	26
LotjaGi3g1v0315900.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	DNA-directed RNA polymerase subunit beta; TAIR: AT1G29940.1 nuclear RNA polymerase A2; Swiss-Prot: sp\|F4I366\|NRPA2_ARATH DNA-directed RNA polymerase I subunit 2; TrEMBL-Plants: tr\|I1M0N3\|I1M0N3_SOYBN DNA-directed RNA polymerase subunit beta; Found in the gene: LotjaGi3g1v0315900	Domains G3DSA:2.40.270.10 G3DSA:2.40.50.150 G3DSA:3.90.1070.20 G3DSA:3.90.1110.10 G3DSA:3.90.1800.10 IPR007120 IPR007121 IPR007641 IPR007642 IPR007644 IPR007645 IPR009674 IPR014724 IPR015712 IPR037033 IPR037034 PF00562 PF04560 PF04561 PF04563 PF04565 PF06883 PS01166 PTHR20856 PTHR20856:SF5 SSF64484 cd00653 mobidb-lite	28
LotjaGi3g1v0315900.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	DNA-directed RNA polymerase subunit beta; TAIR: AT1G29940.1 nuclear RNA polymerase A2; Swiss-Prot: sp\|F4I366\|NRPA2_ARATH DNA-directed RNA polymerase I subunit 2; TrEMBL-Plants: tr\|A0A0R0GQW5\|A0A0R0GQW5_SOYBN DNA-directed RNA polymerase subunit beta; Found in the gene: LotjaGi3g1v0315900	Domains G3DSA:2.40.270.10 G3DSA:2.40.50.150 G3DSA:3.90.1070.20 G3DSA:3.90.1110.10 G3DSA:3.90.1800.10 IPR007120 IPR007121 IPR007641 IPR007642 IPR007644 IPR007645 IPR009674 IPR014724 IPR015712 IPR037033 IPR037034 PF00562 PF04560 PF04561 PF04563 PF04565 PF06883 PS01166 PTHR20856 PTHR20856:SF5 SSF64484 cd00653 mobidb-lite	28
LotjaGi5g1v0334100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	DNA-directed RNA polymerase subunit beta; TAIR: AT5G45140.1 nuclear RNA polymerase C2; Swiss-Prot: sp\|F4KD38\|NRPC2_ARATH DNA-directed RNA polymerase III subunit 2; TrEMBL-Plants: tr\|K7L1D3\|K7L1D3_SOYBN DNA-directed RNA polymerase subunit beta; Found in the gene: LotjaGi5g1v0334100	Domains G3DSA:2.40.270.10 G3DSA:2.40.50.150 G3DSA:3.90.1070.20 G3DSA:3.90.1110.10 G3DSA:3.90.1800.10 IPR007120 IPR007121 IPR007641 IPR007642 IPR007644 IPR007645 IPR007646 IPR007647 IPR014724 IPR015712 IPR037033 IPR037034 PF00562 PF04560 PF04561 PF04563 PF04565 PF04566 PF04567 PS01166 PTHR20856 PTHR20856:SF8 SSF64484 cd00653 mobidb-lite	30

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	25.00