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IPR000286

Source: InterPro

Description

IPR000286 is a Histone deacetylase family.

<p>Histones can be reversibly acetylated on several lysine residues. Regulation of transcription is caused in part by this mechanism. Histone deacetylases catalyse the removal of the acetyl group. Histone deacetylases, acetoin utilization proteins and acetylpolyamine amidohydrolases are all members of this ancient protein superfamily [[cite:PUB00004480]].</p>

This description is obtained from EB-eye REST.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 48

Transcript Name Description Predicted domains Domain count
Lj0g3v0089689.1
– PREDICTED: histone deacetylase 15-like [Cicer arietinum] gi|502151700|ref|XP_004508570.1|
Domains
10
Lj0g3v0137449.1
– Histone deacetylase 6 isoform 2 [Theobroma cacao] gi|508773583|gb|EOY20839.1|
Domains
10
Lj0g3v0178909.1
– PREDICTED: histone deacetylase 14-like [Glycine max] gi|356512844|ref|XP_003525125.1|
Domains
9
Lj0g3v0201999.1
– PREDICTED: histone deacetylase 19-like [Glycine max] gi|356551138|ref|XP_003543935.1|
Domains
13
Lj0g3v0201999.2
– PREDICTED: histone deacetylase 19-like [Glycine max] gi|356551138|ref|XP_003543935.1|
Domains
12
Lj0g3v0301929.1
– Histone deacetylase [Medicago truncatula] gi|357453211|ref|XP_003596882.1|
Domains
13
Lj0g3v0332349.1
– Histone deacetylase 6 isoform 2 [Theobroma cacao] gi|508773583|gb|EOY20839.1|
Domains
15
Lj1g3v0051010.1
–
Domains
10
Lj1g3v0051020.1
– PREDICTED: histone deacetylase 6-like isoform X1 [Cicer arietinum] gi|502158868|ref|XP_004511307.1|
Domains
9
Lj1g3v0318630.1
– Histone deacetylase [Medicago truncatula] gi|357461841|ref|XP_003601202.1|
Domains
13
Lj1g3v1318290.1
– PREDICTED: histone deacetylase 14-like [Glycine max] gi|356512844|ref|XP_003525125.1|
Domains
9
Lj1g3v1318340.1
– Histone deacetylase [Medicago truncatula] gi|357519987|ref|XP_003630282.1|
Domains
12
Lj3g3v1261190.1
– PREDICTED: histone deacetylase 8-like [Cicer arietinum] gi|502083416|ref|XP_004487453.1|
Domains
9
Lj3g3v2996000.1
– Histone deacetylase 9 isoform 11 [Theobroma cacao] gi|508786277|gb|EOY33533.1|
Domains
11
Lj3g3v2996000.2
– PREDICTED: histone deacetylase 9-like [Cicer arietinum] gi|502145712|ref|XP_004506146.1|
Domains
12
Lj4g3v1440790.1
– PREDICTED: histone deacetylase 6-like [Glycine max] gi|356513715|ref|XP_003525556.1|
Domains
13
Lj4g3v1440870.1
– PREDICTED: histone deacetylase 6-like [Glycine max] gi|356513715|ref|XP_003525556.1|
Domains
13
Lj4g3v1719690.1
– PREDICTED: histone deacetylase 5-like [Glycine max] gi|356511847|ref|XP_003524633.1|
Domains
8
Lj4g3v1787130.1
– PREDICTED: histone deacetylase 15-like [Glycine max] gi|356565230|ref|XP_003550845.1|
Domains
9
Lj4g3v1787130.2
– PREDICTED: histone deacetylase 15-like [Glycine max] gi|356565230|ref|XP_003550845.1|
Domains
8
Lj4g3v1787130.3
– PREDICTED: histone deacetylase 15-like [Cicer arietinum] gi|502151700|ref|XP_004508570.1|
Domains
10
Lj4g3v2742710.1
– Histone deacetylase [Medicago truncatula] gi|357519987|ref|XP_003630282.1|
Domains
12
Lj5g3v0391470.1
– PREDICTED: histone deacetylase 2-like [Cicer arietinum] gi|502125369|ref|XP_004498908.1|
Domains
9
LotjaGi1g1v0146200.1
– Histone deacetylase; TAIR: AT4G38130.1 histone deacetylase 1; Swiss-Prot: sp|O22446|HDA19_ARATH Histone deacetylase 19; TrEMBL-Plants: tr|I1LWR2|I1LWR2_SOYBN Histone deacetylase; Found in the gene: LotjaGi1g1v0146200
Domains
14
LotjaGi1g1v0146200.2
– Histone deacetylase; TAIR: AT4G38130.1 histone deacetylase 1; Swiss-Prot: sp|O22446|HDA19_ARATH Histone deacetylase 19; TrEMBL-Plants: tr|I1LWR2|I1LWR2_SOYBN Histone deacetylase; Found in the gene: LotjaGi1g1v0146200
Domains
14
LotjaGi1g1v0146200.3
– Histone deacetylase; TAIR: AT4G38130.1 histone deacetylase 1; Swiss-Prot: sp|O22446|HDA19_ARATH Histone deacetylase 19; TrEMBL-Plants: tr|I1LWR2|I1LWR2_SOYBN Histone deacetylase; Found in the gene: LotjaGi1g1v0146200
Domains
14
LotjaGi1g1v0146200.4
– Histone deacetylase; TAIR: AT4G38130.1 histone deacetylase 1; Swiss-Prot: sp|O22446|HDA19_ARATH Histone deacetylase 19; TrEMBL-Plants: tr|I1LWR2|I1LWR2_SOYBN Histone deacetylase; Found in the gene: LotjaGi1g1v0146200
Domains
14
LotjaGi1g1v0146200.5
– Histone deacetylase; TAIR: AT4G38130.1 histone deacetylase 1; Swiss-Prot: sp|O22446|HDA19_ARATH Histone deacetylase 19; TrEMBL-Plants: tr|I1LWR2|I1LWR2_SOYBN Histone deacetylase; Found in the gene: LotjaGi1g1v0146200
Domains
14
LotjaGi1g1v0146200.6
– Histone deacetylase; TAIR: AT4G38130.1 histone deacetylase 1; Swiss-Prot: sp|O22446|HDA19_ARATH Histone deacetylase 19; TrEMBL-Plants: tr|A0A151RPJ3|A0A151RPJ3_CAJCA Histone deacetylase; Found in the gene: LotjaGi1g1v0146200
Domains
13
LotjaGi1g1v0176200.1
– Histone deacetylase; TAIR: AT5G63110.1 histone deacetylase 6; Swiss-Prot: sp|Q9FML2|HDA6_ARATH Histone deacetylase 6; TrEMBL-Plants: tr|G7J4T5|G7J4T5_MEDTR Histone deacetylase; Found in the gene: LotjaGi1g1v0176200
Domains
15
LotjaGi1g1v0176200.2
– Histone deacetylase; TAIR: AT5G63110.1 histone deacetylase 6; Swiss-Prot: sp|Q9FML2|HDA6_ARATH Histone deacetylase 6; TrEMBL-Plants: tr|G7J4T5|G7J4T5_MEDTR Histone deacetylase; Found in the gene: LotjaGi1g1v0176200
Domains
15
LotjaGi3g1v0181900.1
– Histone deacetylase family protein; TAIR: AT1G08460.1 histone deacetylase 8; Swiss-Prot: sp|Q94EJ2|HDA8_ARATH Histone deacetylase 8; TrEMBL-Plants: tr|Q2HSH7|Q2HSH7_MEDTR Histone deacetylase superfamily; Found in the gene: LotjaGi3g1v0181900
Domains
11
LotjaGi3g1v0479900.1
– Histone deacetylase; TAIR: AT3G44680.1 histone deacetylase 9; Swiss-Prot: sp|Q8H0W2|HDA9_ARATH Histone deacetylase 9; TrEMBL-Plants: tr|A0A151TNQ1|A0A151TNQ1_CAJCA Histone deacetylase; Found in the gene: LotjaGi3g1v0479900
Domains
14
LotjaGi3g1v0479900.2
– Histone deacetylase; TAIR: AT3G44680.1 histone deacetylase 9; Swiss-Prot: sp|Q8H0W2|HDA9_ARATH Histone deacetylase 9; TrEMBL-Plants: tr|A0A151TNQ1|A0A151TNQ1_CAJCA Histone deacetylase; Found in the gene: LotjaGi3g1v0479900
Domains
14
LotjaGi3g1v0479900.3
– Histone deacetylase; TAIR: AT3G44680.1 histone deacetylase 9; Swiss-Prot: sp|Q8H0W2|HDA9_ARATH Histone deacetylase 9; TrEMBL-Plants: tr|A0A151TNQ1|A0A151TNQ1_CAJCA Histone deacetylase; Found in the gene: LotjaGi3g1v0479900
Domains
13
LotjaGi3g1v0479900.4
– Histone deacetylase; TAIR: AT3G44680.1 histone deacetylase 9; Swiss-Prot: sp|Q8H0W2|HDA9_ARATH Histone deacetylase 9; TrEMBL-Plants: tr|A0A151TNQ1|A0A151TNQ1_CAJCA Histone deacetylase; Found in the gene: LotjaGi3g1v0479900
Domains
13
LotjaGi3g1v0479900.5
– Histone deacetylase; TAIR: AT3G44680.1 histone deacetylase 9; Swiss-Prot: sp|Q8H0W2|HDA9_ARATH Histone deacetylase 9; TrEMBL-Plants: tr|A0A151TNQ1|A0A151TNQ1_CAJCA Histone deacetylase; Found in the gene: LotjaGi3g1v0479900
Domains
13
LotjaGi4g1v0229800.1
– Histone deacetylase; TAIR: AT5G63110.1 histone deacetylase 6; Swiss-Prot: sp|Q9FML2|HDA6_ARATH Histone deacetylase 6; TrEMBL-Plants: tr|A0A0S3R6F7|A0A0S3R6F7_PHAAN Histone deacetylase; Found in the gene: LotjaGi4g1v0229800
Domains
15
LotjaGi4g1v0229800.2
– Histone deacetylase; TAIR: AT5G63110.1 histone deacetylase 6; Swiss-Prot: sp|Q9FML2|HDA6_ARATH Histone deacetylase 6; TrEMBL-Plants: tr|A0A0S3R6F7|A0A0S3R6F7_PHAAN Histone deacetylase; Found in the gene: LotjaGi4g1v0229800
Domains
15
LotjaGi4g1v0229800.3
– Histone deacetylase; TAIR: AT5G63110.1 histone deacetylase 6; Swiss-Prot: sp|Q9FML2|HDA6_ARATH Histone deacetylase 6; TrEMBL-Plants: tr|A0A0S3R6F7|A0A0S3R6F7_PHAAN Histone deacetylase; Found in the gene: LotjaGi4g1v0229800
Domains
15
LotjaGi4g1v0230000.1
– Histone deacetylase; TAIR: AT5G63110.1 histone deacetylase 6; Swiss-Prot: sp|Q9FML2|HDA6_ARATH Histone deacetylase 6; TrEMBL-Plants: tr|A0A0L9TQL1|A0A0L9TQL1_PHAAN Histone deacetylase; Found in the gene: LotjaGi4g1v0230000
Domains
15
LotjaGi4g1v0230000.2
– Histone deacetylase; TAIR: AT5G63110.1 histone deacetylase 6; Swiss-Prot: sp|Q9FML2|HDA6_ARATH Histone deacetylase 6; TrEMBL-Plants: tr|A0A0L9TQL1|A0A0L9TQL1_PHAAN Histone deacetylase; Found in the gene: LotjaGi4g1v0230000
Domains
15
LotjaGi4g1v0254400.1
– Histone deacetylase; TAIR: AT5G61060.1 histone deacetylase 5; Swiss-Prot: sp|Q8RX28|HDA5_ARATH Histone deacetylase 5; TrEMBL-Plants: tr|I1JZJ1|I1JZJ1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0254400
Domains
11
LotjaGi4g1v0264100.1
– Histone deacetylase; TAIR: AT3G18520.1 histone deacetylase 15; Swiss-Prot: sp|Q8GXJ1|HDA15_ARATH Histone deacetylase 15; TrEMBL-Plants: tr|A0A072UQH9|A0A072UQH9_MEDTR Histone deacetylase superfamily protein; Found in the gene: LotjaGi4g1v0264100
Domains
12
LotjaGi4g1v0264100.2
– Histone deacetylase; TAIR: AT3G18520.1 histone deacetylase 15; Swiss-Prot: sp|Q8GXJ1|HDA15_ARATH Histone deacetylase 15; TrEMBL-Plants: tr|A0A072UQH9|A0A072UQH9_MEDTR Histone deacetylase superfamily protein; Found in the gene: LotjaGi4g1v0264100
Domains
12
LotjaGi4g1v0410000.1
– Histone deacetylase, putative; TAIR: AT4G33470.1 histone deacetylase 14; Swiss-Prot: sp|Q941D6|HDA14_ARATH Histone deacetylase 14; TrEMBL-Plants: tr|I3SY87|I3SY87_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0410000
Domains
11
LotjaGi4g1v0410000.2
– Histone deacetylase, putative; TAIR: AT4G33470.1 histone deacetylase 14; Swiss-Prot: sp|Q941D6|HDA14_ARATH Histone deacetylase 14; TrEMBL-Plants: tr|I3SY87|I3SY87_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0410000
Domains
11
LotjaGi5g1v0041400.1
– Histone deacetylase, putative; TAIR: AT5G26040.2 histone deacetylase 2; Swiss-Prot: sp|Q944K3|HDA2_ARATH Histone deacetylase 2; TrEMBL-Plants: tr|I3S3T1|I3S3T1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0041400
Domains
11

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
cd09993 CDD 1 2.08