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PS50271

Source: ProSiteProfiles

Description

Zinc finger UBP-type profile.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0008270
Molecular function Zinc ion binding Interacting selectively and non-covalently with zinc (Zn) ions.
Subterm of

Associated Lotus transcripts 19

Transcript Name Description Predicted domains Domain count
Lj0g3v0338569.1
– PREDICTED: ubiquitin carboxyl-terminal hydrolase 14-like [Glycine max] gi|356517211|ref|XP_003527282.1|
Domains
29
Lj1g3v0051010.1
–
Domains
10
Lj1g3v0051020.1
– PREDICTED: histone deacetylase 6-like isoform X1 [Cicer arietinum] gi|502158868|ref|XP_004511307.1|
Domains
9
Lj3g3v0030640.1
– PREDICTED: BRCA1-associated protein-like [Cicer arietinum] gi|502080643|ref|XP_004486630.1|
Domains
19
Lj4g3v1881410.1
– PREDICTED: BRCA1-associated protein-like [Glycine max] gi|356562985|ref|XP_003549748.1|
Domains
16
Lj4g3v1881410.2
– PREDICTED: BRCA1-associated protein-like [Glycine max] gi|356562985|ref|XP_003549748.1|
Domains
16
Lj5g3v0510990.2
– PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Glycine max] gi|356552474|ref|XP_003544592.1|
Domains
15
Lj6g3v1984610.1
– PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2-like [Glycine max] gi|356534252|ref|XP_003535671.1|
Domains
18
Lj6g3v1984610.2
– PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2-like [Glycine max] gi|356534252|ref|XP_003535671.1|
Domains
18
LotjaGi2g1v0388200.1
– Ubiquitin carboxyl-terminal hydrolase; TAIR: AT4G22350.2 Ubiquitin C-terminal hydrolases superfamily protein; Swiss-Prot: sp|Q53GS9|SNUT2_HUMAN U4/U6.U5 tri-snRNP-associated protein 2; TrEMBL-Plants: tr|V7BEY8|V7BEY8_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0388200
Domains
19
LotjaGi2g1v0388200.2
– Ubiquitin carboxyl-terminal hydrolase; TAIR: AT4G22350.2 Ubiquitin C-terminal hydrolases superfamily protein; Swiss-Prot: sp|Q53GS9|SNUT2_HUMAN U4/U6.U5 tri-snRNP-associated protein 2; TrEMBL-Plants: tr|V7BEY8|V7BEY8_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0388200
Domains
19
LotjaGi2g1v0388200.3
– Ubiquitin carboxyl-terminal hydrolase; TAIR: AT4G22350.2 Ubiquitin C-terminal hydrolases superfamily protein; Swiss-Prot: sp|Q3TIX9|SNUT2_MOUSE U4/U6.U5 tri-snRNP-associated protein 2; TrEMBL-Plants: tr|V7BEY8|V7BEY8_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0388200
Domains
19
LotjaGi2g1v0460500.1
– Ubiquitin carboxyl-terminal hydrolase; TAIR: AT2G14825.1 histone deacetylase-like protein; Swiss-Prot: sp|Q9UBN7|HDAC6_HUMAN Histone deacetylase 6; TrEMBL-Plants: tr|A0A175YFB0|A0A175YFB0_DAUCA Uncharacterized protein; Found in the gene: LotjaGi2g1v0460500
Domains
9
LotjaGi3g1v0325900.1
– Ubiquitinyl hydrolase 1; TAIR: AT3G20630.1 ubiquitin-specific protease 14; Swiss-Prot: sp|Q8L6Y1|UBP14_ARATH Ubiquitin carboxyl-terminal hydrolase 14; TrEMBL-Plants: tr|A0A0S3S9M3|A0A0S3S9M3_PHAAN Ubiquitinyl hydrolase 1; Found in the gene: LotjaGi3g1v0325900
Domains
32
LotjaGi4g1v0273800.1
– BRCA1-associated protein; TAIR: AT2G42160.1 zinc finger (ubiquitin-hydrolase) domain-containing protein; Swiss-Prot: sp|Q7Z569|BRAP_HUMAN BRCA1-associated protein; TrEMBL-Plants: tr|I1MU69|I1MU69_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0273800
Domains
17
LotjaGi5g1v0054200.1
– Ubiquitin carboxyl-terminal hydrolase, putative; TAIR: AT5G10790.1 ubiquitin-specific protease 22; Swiss-Prot: sp|Q9LEW0|UBP22_ARATH Ubiquitin carboxyl-terminal hydrolase 22; TrEMBL-Plants: tr|A0A151RT91|A0A151RT91_CAJCA Ubiquitinyl hydrolase 1; Found in the gene: LotjaGi5g1v0054200
Domains
17
LotjaGi5g1v0054200.2
– Ubiquitin carboxyl-terminal hydrolase, putative; TAIR: AT5G10790.1 ubiquitin-specific protease 22; Swiss-Prot: sp|Q9LEW0|UBP22_ARATH Ubiquitin carboxyl-terminal hydrolase 22; TrEMBL-Plants: tr|A0A151RT91|A0A151RT91_CAJCA Ubiquitinyl hydrolase 1; Found in the gene: LotjaGi5g1v0054200
Domains
17
LotjaGi6g1v0036200.1
– Ubiquitinyl hydrolase 1; TAIR: AT1G04860.1 ubiquitin-specific protease 2; Swiss-Prot: sp|Q8W4N3|UBP2_ARATH Ubiquitin carboxyl-terminal hydrolase 2; TrEMBL-Plants: tr|I1MY83|I1MY83_SOYBN Ubiquitinyl hydrolase 1; Found in the gene: LotjaGi6g1v0036200
Domains
21
LotjaGi6g1v0321900.2
– Ubiquitin carboxyl-terminal hydrolase; TAIR: AT4G22350.2 Ubiquitin C-terminal hydrolases superfamily protein; Swiss-Prot: sp|Q3TIX9|SNUT2_MOUSE U4/U6.U5 tri-snRNP-associated protein 2; TrEMBL-Plants: tr|V7BEY8|V7BEY8_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0321900
Domains
20

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 5.26