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IPR041806 is a Polyadenylate-binding protein-interacting protein 5/6/7, CUE domain.
<p>This entry represents the CUE domain found in a group of plant proteins, including CID5/6/7. CID7 contains an N-terminal PABC-interacting domain (PAM2 or PABP-interacting motif 2) which is also found in the human Paip1 and Paip2. It functions as an interaction partner of the PABC domain of Arabidopsis thaliana Poly(A)-binding proteins. It also harbours an ubiquitin-associated (UBA)-like CUE domain and a C-terminal small MutS-related (SMR) domain [[cite:PUB00067313]]. CID5 (also known as IPD1) has been shown to regulate the endocycle leading to hypocotyl elongation [[cite:PUB00088629]]. The biological function of CID6 is unclear.</p>
This description is obtained from EB-eye REST.
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | Smr domain-containing protein; TAIR: AT2G26280.1 CTC-interacting domain 7; Swiss-Prot: sp|O64843|CID7_ARATH Polyadenylate-binding protein-interacting protein 7; TrEMBL-Plants: tr|A0A0L9UH72|A0A0L9UH72_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0372100 | 12 | ||
| – | Smr domain-containing protein; TAIR: AT2G26280.1 CTC-interacting domain 7; Swiss-Prot: sp|O64843|CID7_ARATH Polyadenylate-binding protein-interacting protein 7; TrEMBL-Plants: tr|A0A072VDP3|A0A072VDP3_MEDTR Smr (Small MutS-related) domain protein; Found in the gene: LotjaGi5g1v0048800 | 16 | ||
| – | CTC-interacting domain 7; TAIR: AT2G26280.1 CTC-interacting domain 7; Swiss-Prot: sp|O64843|CID7_ARATH Polyadenylate-binding protein-interacting protein 7; TrEMBL-Plants: tr|A0A072VDP3|A0A072VDP3_MEDTR Smr (Small MutS-related) domain protein; Found in the gene: LotjaGi5g1v0048800 | 8 | ||
| – | CTC-interacting domain protein, putative; TAIR: AT5G11440.1 CTC-interacting domain 5; Swiss-Prot: sp|Q9LYE5|CID5_ARATH Polyadenylate-binding protein-interacting protein 5; TrEMBL-Plants: tr|I3SNT6|I3SNT6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0063100 | 11 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| mobidb-lite | MobiDBLite | 1 | 25.00 |