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IPR042103

Source: InterPro

Description

IPR042103 is a Serine-tRNA synthetase, type1, N-terminal domain superfamily.

<p>The seryl-tRNA synthetase (SerRS) is a homodimeric enzyme that belongs to class II tRNA synthetases. SerRS catalyses the aminoacylation reaction that charges serine onto its cognate tRNA for protein synthesis. Each monomer is comprised of two domains: an N-terminal tRNA-binding domain and a catalytic domain composed of seven-stranded anti-parallel β-sheet [[cite:PUB00092577]].</p> <p>This entry represents the N-terminal domain of Serine-tRNA synthetase, which consists of two helices in a long α-hairpin and corresponds to the tRNA binding domain. Serine-tRNA synthetase ([ec:6.1.1.11]) exists as monomer and belongs to class IIa aminoacyl-tRNA synthetase [[cite:PUB00006326]].</p>

This description is obtained from EB-eye REST.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 2

Transcript Name Description Predicted domains Domain count
LotjaGi1g1v0339700.1
– Serine--tRNA ligase; TAIR: AT1G11870.2 Seryl-tRNA synthetase; Swiss-Prot: sp|Q8RWT8|SYSM_ARATH Serine--tRNA ligase, chloroplastic/mitochondrial; TrEMBL-Plants: tr|G7J3Z0|G7J3Z0_MEDTR Seryl-tRNA synthetase/serine-tRNA ligase; Found in the gene: LotjaGi1g1v0339700
Domains
22
LotjaGi5g1v0220300.2
– Serine--tRNA ligase; TAIR: AT5G27470.1 seryl-tRNA synthetase / serine-tRNA ligase; Swiss-Prot: sp|O81983|SYS_HELAN Serine--tRNA ligase; TrEMBL-Plants: tr|A0A0B2Q4B0|A0A0B2Q4B0_GLYSO Serine--tRNA ligase; Found in the gene: LotjaGi5g1v0220300
Domains
21

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
cd00770 CDD 1 50.00