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IPR033729 is a Serine-tRNA ligase catalytic core domain.
<p>Serine--tRNA ligase or seryl-tRNA synthetase (SerRS) is responsible for the attachment of serine to the 3' OH group of ribose of the appropriate tRNA. SerRS is a class II aminoacyl-tRNA synthetase, this assignment is based upon its structure and the presence of three characteristic sequence motifs in the core domain [[cite:PUB00003923], [cite:PUB00007363], [cite:PUB00080183], [cite:PUB00079875]]. This core domain is primarily responsible for ATP-dependent formation of the enzyme bound aminoacyl-adenylate. SerRS synthetase is a homodimer [[cite:PUB00004075], [cite:PUB00022697]].</p>
This description is obtained from EB-eye REST.
Transcript | Name | Description | Predicted domains | Domain count |
---|---|---|---|---|
– | Seryl-tRNA synthetase [Medicago truncatula] gi|357465107|ref|XP_003602835.1| | 17 | ||
– | Seryl-tRNA synthetase [Medicago truncatula] gi|357465105|ref|XP_003602834.1| | 21 | ||
– | PREDICTED: seryl-tRNA synthetase-like [Glycine max] gi|356576773|ref|XP_003556504.1| | 20 | ||
– | PREDICTED: seryl-tRNA synthetase-like [Glycine max] gi|356576773|ref|XP_003556504.1| | 20 | ||
– | Serine--tRNA ligase; TAIR: AT1G11870.2 Seryl-tRNA synthetase; Swiss-Prot: sp|Q8RWT8|SYSM_ARATH Serine--tRNA ligase, chloroplastic/mitochondrial; TrEMBL-Plants: tr|G7J3Z0|G7J3Z0_MEDTR Seryl-tRNA synthetase/serine-tRNA ligase; Found in the gene: LotjaGi1g1v0339700 | 22 | ||
– | Serine--tRNA ligase; TAIR: AT1G11870.1 Seryl-tRNA synthetase; Swiss-Prot: sp|Q8RWT8|SYSM_ARATH Serine--tRNA ligase, chloroplastic/mitochondrial; TrEMBL-Plants: tr|G7J3Z0|G7J3Z0_MEDTR Seryl-tRNA synthetase/serine-tRNA ligase; Found in the gene: LotjaGi1g1v0339700 | 17 | ||
– | Serine--tRNA ligase; TAIR: AT1G11870.1 Seryl-tRNA synthetase; Swiss-Prot: sp|Q8RWT8|SYSM_ARATH Serine--tRNA ligase, chloroplastic/mitochondrial; TrEMBL-Plants: tr|G7J3Z0|G7J3Z0_MEDTR Seryl-tRNA synthetase/serine-tRNA ligase; Found in the gene: LotjaGi1g1v0339700 | 17 | ||
– | Serine--tRNA ligase; TAIR: AT5G27470.1 seryl-tRNA synthetase / serine-tRNA ligase; Swiss-Prot: sp|O81983|SYS_HELAN Serine--tRNA ligase; TrEMBL-Plants: tr|A0A0B2Q4B0|A0A0B2Q4B0_GLYSO Serine--tRNA ligase; Found in the gene: LotjaGi5g1v0220300 | 21 |
A list of co-occurring predicted domains within the L. japonicus gene space:
Predicted domain | Source | Observations | Saturation (%) |
---|---|---|---|
cd00770 | CDD | 1 | 12.50 |