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SSF46589

Source: SUPERFAMILY

Description

No description is available for this domain.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0000166
Molecular function Nucleotide binding Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
Subterm of

Associated Lotus transcripts 14

Transcript Name Description Predicted domains Domain count
Lj1g3v1514800.1
– Seryl-tRNA synthetase [Medicago truncatula] gi|357465107|ref|XP_003602835.1|
Domains
17
Lj1g3v1514800.2
– Seryl-tRNA synthetase [Medicago truncatula] gi|357465105|ref|XP_003602834.1|
Domains
21
Lj5g3v1494610.2
– PREDICTED: seryl-tRNA synthetase-like [Glycine max] gi|356576773|ref|XP_003556504.1|
Domains
20
Lj5g3v1494610.3
– PREDICTED: seryl-tRNA synthetase-like [Glycine max] gi|356576773|ref|XP_003556504.1|
Domains
20
LotjaGi1g1v0339700.1
– Serine--tRNA ligase; TAIR: AT1G11870.2 Seryl-tRNA synthetase; Swiss-Prot: sp|Q8RWT8|SYSM_ARATH Serine--tRNA ligase, chloroplastic/mitochondrial; TrEMBL-Plants: tr|G7J3Z0|G7J3Z0_MEDTR Seryl-tRNA synthetase/serine-tRNA ligase; Found in the gene: LotjaGi1g1v0339700
Domains
22
LotjaGi1g1v0339700.2
– Serine--tRNA ligase; TAIR: AT1G11870.1 Seryl-tRNA synthetase; Swiss-Prot: sp|Q8RWT8|SYSM_ARATH Serine--tRNA ligase, chloroplastic/mitochondrial; TrEMBL-Plants: tr|G7J3Z0|G7J3Z0_MEDTR Seryl-tRNA synthetase/serine-tRNA ligase; Found in the gene: LotjaGi1g1v0339700
Domains
17
LotjaGi1g1v0339700.3
– Serine--tRNA ligase; TAIR: AT1G11870.1 Seryl-tRNA synthetase; Swiss-Prot: sp|Q8RWT8|SYSM_ARATH Serine--tRNA ligase, chloroplastic/mitochondrial; TrEMBL-Plants: tr|G7J3Z0|G7J3Z0_MEDTR Seryl-tRNA synthetase/serine-tRNA ligase; Found in the gene: LotjaGi1g1v0339700
Domains
17
LotjaGi2g1v0111300.2
– Valine--tRNA ligase; TAIR: AT5G16715.1 protein EMBRYO DEFECTIVE 2247; Swiss-Prot: sp|F4KE63|SYVM2_ARATH Valine--tRNA ligase, chloroplastic/mitochondrial 2; TrEMBL-Plants: tr|A0A0B2SHS3|A0A0B2SHS3_GLYSO Valine--tRNA ligase; Found in the gene: LotjaGi2g1v0111300
Domains
31
LotjaGi2g1v0111300.3
– Valine--tRNA ligase; TAIR: AT5G16715.1 protein EMBRYO DEFECTIVE 2247; Swiss-Prot: sp|F4KE63|SYVM2_ARATH Valine--tRNA ligase, chloroplastic/mitochondrial 2; TrEMBL-Plants: tr|A0A0B2SHS3|A0A0B2SHS3_GLYSO Valine--tRNA ligase; Found in the gene: LotjaGi2g1v0111300
Domains
27
LotjaGi2g1v0111300.4
– Valine--tRNA ligase; TAIR: AT5G16715.1 protein EMBRYO DEFECTIVE 2247; Swiss-Prot: sp|F4KE63|SYVM2_ARATH Valine--tRNA ligase, chloroplastic/mitochondrial 2; TrEMBL-Plants: tr|A0A0B2SHS3|A0A0B2SHS3_GLYSO Valine--tRNA ligase; Found in the gene: LotjaGi2g1v0111300
Domains
31
LotjaGi2g1v0111300.5
– Valine--tRNA ligase; TAIR: AT5G16715.1 protein EMBRYO DEFECTIVE 2247; Swiss-Prot: sp|F4KE63|SYVM2_ARATH Valine--tRNA ligase, chloroplastic/mitochondrial 2; TrEMBL-Plants: tr|A0A0B2SHS3|A0A0B2SHS3_GLYSO Valine--tRNA ligase; Found in the gene: LotjaGi2g1v0111300
Domains
28
LotjaGi2g1v0111300.6
– Valine--tRNA ligase; TAIR: AT5G16715.1 protein EMBRYO DEFECTIVE 2247; Swiss-Prot: sp|F4KE63|SYVM2_ARATH Valine--tRNA ligase, chloroplastic/mitochondrial 2; TrEMBL-Plants: tr|A0A0B2SHS3|A0A0B2SHS3_GLYSO Valine--tRNA ligase; Found in the gene: LotjaGi2g1v0111300
Domains
31
LotjaGi2g1v0111300.7
– Valine--tRNA ligase; TAIR: AT5G16715.1 protein EMBRYO DEFECTIVE 2247; Swiss-Prot: sp|F4KE63|SYVM2_ARATH Valine--tRNA ligase, chloroplastic/mitochondrial 2; TrEMBL-Plants: tr|A0A0B2SHS3|A0A0B2SHS3_GLYSO Valine--tRNA ligase; Found in the gene: LotjaGi2g1v0111300
Domains
31
LotjaGi5g1v0220300.2
– Serine--tRNA ligase; TAIR: AT5G27470.1 seryl-tRNA synthetase / serine-tRNA ligase; Swiss-Prot: sp|O81983|SYS_HELAN Serine--tRNA ligase; TrEMBL-Plants: tr|A0A0B2Q4B0|A0A0B2Q4B0_GLYSO Serine--tRNA ligase; Found in the gene: LotjaGi5g1v0220300
Domains
21

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
cd00770 CDD 1 7.14