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PF01873

Source: Pfam

Description

Domain found in IF2B/IF5

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003743
Molecular function Translation initiation factor activity Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide.
Subterm of
GO:0006413
Biological process Translational initiation The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA or circRNA, and an initiation complex that contains the first aminoacyl-tRNA.
Subterm of
Part of

Associated Lotus transcripts 13

Transcript Name Description Predicted domains Domain count
Lj1g3v3244550.1
– Eukaryotic translation initiation factor [Medicago truncatula] gi|357508251|ref|XP_003624414.1|
Domains
21
Lj1g3v3244570.1
– PREDICTED: eukaryotic translation initiation factor 5-like [Glycine max] gi|356499628|ref|XP_003518639.1|
Domains
19
Lj2g3v0918380.1
– Eukaryotic translation initiation factor [Medicago truncatula] gi|357508251|ref|XP_003624414.1|
Domains
11
Lj2g3v2447110.1
– PREDICTED: eukaryotic translation initiation factor 2 subunit beta-like [Glycine max] gi|356553184|ref|XP_003544938.1|
Domains
9
Lj6g3v0352720.1
– PREDICTED: eukaryotic translation initiation factor 2 subunit beta-like isoform X1 [Cicer arietinum] gi|502096398|ref|XP_004490723.1|
Domains
10
LotjaGi1g1v0105300.1
– Eukaryotic translation initiation factor 2 subunit beta; TAIR: AT5G20920.1 eukaryotic translation initiation factor 2 beta subunit; Swiss-Prot: sp|P55871|IF2B_MALDO Eukaryotic translation initiation factor 2 subunit beta; TrEMBL-Plants: tr|I3SDH8|I3SDH8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0105300
Domains
10
LotjaGi1g1v0544600.1
– Eukaryotic translation initiation factor 5; TAIR: AT1G36730.1 Translation initiation factor IF2/IF5; Swiss-Prot: sp|P48724|IF5_PHAVU Eukaryotic translation initiation factor 5; TrEMBL-Plants: tr|A0A0L9TDF5|A0A0L9TDF5_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0544600
Domains
22
LotjaGi1g1v0544600.2
– Eukaryotic translation initiation factor 5; TAIR: AT1G36730.1 Translation initiation factor IF2/IF5; Swiss-Prot: sp|P48724|IF5_PHAVU Eukaryotic translation initiation factor 5; TrEMBL-Plants: tr|A0A0L9TDF5|A0A0L9TDF5_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0544600
Domains
22
LotjaGi1g1v0544600.3
– Eukaryotic translation initiation factor 5; TAIR: AT1G36730.1 Translation initiation factor IF2/IF5; Swiss-Prot: sp|P48724|IF5_PHAVU Eukaryotic translation initiation factor 5; TrEMBL-Plants: tr|A0A0L9TDF5|A0A0L9TDF5_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0544600
Domains
22
LotjaGi1g1v0544800.1
– Eukaryotic translation initiation factor 5; TAIR: AT1G36730.1 Translation initiation factor IF2/IF5; Swiss-Prot: sp|P48724|IF5_PHAVU Eukaryotic translation initiation factor 5; TrEMBL-Plants: tr|A0A0L9TDF5|A0A0L9TDF5_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0544800
Domains
21
LotjaGi2g1v0237700_LC.1
– Eukaryotic translation initiation factor, putative; TAIR: AT1G36730.1 Translation initiation factor IF2/IF5; Swiss-Prot: sp|P48724|IF5_PHAVU Eukaryotic translation initiation factor 5; TrEMBL-Plants: tr|B9N7N9|B9N7N9_POPTR Eukaryotic translation initiation factor 5-2 family protein; Found in the gene: LotjaGi2g1v0237700_LC
Domains
12
LotjaGi2g1v0237700_LC.2
– Eukaryotic translation initiation factor, putative; TAIR: AT1G36730.1 Translation initiation factor IF2/IF5; Swiss-Prot: sp|P48724|IF5_PHAVU Eukaryotic translation initiation factor 5; TrEMBL-Plants: tr|B9N7N9|B9N7N9_POPTR Eukaryotic translation initiation factor 5-2 family protein; Found in the gene: LotjaGi2g1v0237700_LC
Domains
12
LotjaGi6g1v0044400.1
– Eukaryotic translation initiation factor 2 subunit beta; TAIR: AT5G20920.1 eukaryotic translation initiation factor 2 beta subunit; Swiss-Prot: sp|P55871|IF2B_MALDO Eukaryotic translation initiation factor 2 subunit beta; TrEMBL-Plants: tr|A0A1J7HMN2|A0A1J7HMN2_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0044400
Domains
10

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
SSF75689 SUPERFAMILY 1 7.69