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PF09011

Source: Pfam

Description

HMG-box domain

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 13

Transcript Name Description Predicted domains Domain count
Lj0g3v0195299.1
– PREDICTED: high mobility group B protein 10-like [Cicer arietinum] gi|502117956|ref|XP_004496029.1|
Domains
16
Lj0g3v0300819.2
– PREDICTED: high mobility group B protein 9-like [Glycine max] gi|356508987|ref|XP_003523234.1|
Domains
15
Lj1g3v4740410.1
– PREDICTED: high mobility group B protein 10-like [Cicer arietinum] gi|502117956|ref|XP_004496029.1|
Domains
16
Lj1g3v4740410.2
– PREDICTED: high mobility group B protein 10-like [Cicer arietinum] gi|502117956|ref|XP_004496029.1|
Domains
16
Lj4g3v0280790.1
– PREDICTED: high mobility group B protein 14-like isoform X2 [Cicer arietinum] gi|502141898|ref|XP_004504692.1|
Domains
11
Lj5g3v1529860.1
– PREDICTED: high mobility group B protein 10-like [Cicer arietinum] gi|502117956|ref|XP_004496029.1|
Domains
6
Lj5g3v1529860.2
– PREDICTED: high mobility group B protein 10-like [Cicer arietinum] gi|502117956|ref|XP_004496029.1|
Domains
6
LotjaGi1g1v0240800.1
– High mobility group B-like protein; TAIR: AT1G76110.1 HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain-containing protein; Swiss-Prot: sp|Q9SGS2|HMGB9_ARATH High mobility group B protein 9; TrEMBL-Plants: tr|I1JSY3|I1JSY3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0240800
Domains
18
LotjaGi1g1v0737100.1
– High mobility group B-like protein; TAIR: AT1G55650.1 HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain-containing protein; Swiss-Prot: sp|Q9LG02|HMG11_ARATH Putative high mobility group B protein 11; TrEMBL-Plants: tr|A0A0B2QUC4|A0A0B2QUC4_GLYSO High mobility group B protein 10; Found in the gene: LotjaGi1g1v0737100
Domains
19
LotjaGi1g1v0737100.3
– High mobility group B-like protein; TAIR: AT1G55650.1 HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain-containing protein; Swiss-Prot: sp|Q9LG02|HMG11_ARATH Putative high mobility group B protein 11; TrEMBL-Plants: tr|A0A0B2QUC4|A0A0B2QUC4_GLYSO High mobility group B protein 10; Found in the gene: LotjaGi1g1v0737100
Domains
19
LotjaGi1g1v0737100.4
– High mobility group B-like protein; TAIR: AT1G55650.1 HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain-containing protein; Swiss-Prot: sp|B3DLD3|SOX18_XENTR Transcription factor Sox-18; TrEMBL-Plants: tr|A0A0B2QUC4|A0A0B2QUC4_GLYSO High mobility group B protein 10; Found in the gene: LotjaGi1g1v0737100
Domains
10
LotjaGi5g1v0231300.1
– High mobility group B-like protein; TAIR: AT3G13350.1 HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain-containing protein; Swiss-Prot: sp|Q65WY8|SSP1B_ORYSJ FACT complex subunit SSRP1-B; TrEMBL-Plants: tr|A0A0B2QUC4|A0A0B2QUC4_GLYSO High mobility group B protein 10; Found in the gene: LotjaGi5g1v0231300
Domains
9
LotjaGi5g1v0231300.2
– High mobility group B-like protein; TAIR: AT3G13350.1 HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain-containing protein; Swiss-Prot: sp|Q9LTT3|HMG10_ARATH High mobility group B protein 10; TrEMBL-Plants: tr|A0A0B2QUC4|A0A0B2QUC4_GLYSO High mobility group B protein 10; Found in the gene: LotjaGi5g1v0231300
Domains
18

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
cd16872 CDD 1 7.69