Domain Predictions — View

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PF13299

Source: Pfam

Description

Cleavage and polyadenylation factor 2 C-terminal

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 5

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0106869.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: cleavage and polyadenylation specificity factor subunit 2-like isoform 2 [Glycine max] gi\|356530858\|ref\|XP_003533996.1\|	Domains Coil IPR001279 IPR011108 IPR025069 IPR027075 PF07521 PF13299 PTHR11203 PTHR11203:SF5 SSF56281	10
LotjaGi2g1v0141300.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Cleavage and polyadenylation specificity factor subunit 2; TAIR: AT5G23880.1 cleavage and polyadenylation specificity factor 100; Swiss-Prot: sp\|Q9LKF9\|CPSF2_ARATH Cleavage and polyadenylation specificity factor subunit 2; TrEMBL-Plants: tr\|A0A1J7HZX4\|A0A1J7HZX4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0141300	Domains Coil G3DSA:3.60.15.10 IPR001279 IPR011108 IPR022712 IPR025069 IPR027075 IPR035639 IPR036866 PF07521 PF10996 PF13299 PF16661 PTHR45922 SM01027 SSF56281 cd16293	17
LotjaGi2g1v0141300.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Cleavage and polyadenylation specificity factor subunit 2-like protein; TAIR: AT5G23880.1 cleavage and polyadenylation specificity factor 100; Swiss-Prot: sp\|Q9LKF9\|CPSF2_ARATH Cleavage and polyadenylation specificity factor subunit 2; TrEMBL-Plants: tr\|A0A0B0PTU3\|A0A0B0PTU3_GOSAR Cleavage and polyadenylation specificity factor subunit 2-like protein; Found in the gene: LotjaGi2g1v0141300	Domains Coil G3DSA:3.40.50.10890 G3DSA:3.60.15.10 IPR001279 IPR011108 IPR025069 IPR027075 IPR035639 IPR036866 PF07521 PF13299 PF16661 PTHR45922 SSF56281 cd16293	15
LotjaGi2g1v0141300.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Cleavage and polyadenylation specificity factor subunit 2; TAIR: AT5G23880.1 cleavage and polyadenylation specificity factor 100; Swiss-Prot: sp\|Q9LKF9\|CPSF2_ARATH Cleavage and polyadenylation specificity factor subunit 2; TrEMBL-Plants: tr\|A0A1J7HZX4\|A0A1J7HZX4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0141300	Domains Coil G3DSA:3.60.15.10 IPR001279 IPR011108 IPR022712 IPR025069 IPR027075 IPR035639 IPR036866 PF07521 PF10996 PF13299 PF16661 PTHR45922 SM01027 SSF56281 cd16293	17
LotjaGi2g1v0141300.5 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Cleavage and polyadenylation specificity factor subunit 2; TAIR: AT5G23880.1 cleavage and polyadenylation specificity factor 100; Swiss-Prot: sp\|Q9LKF9\|CPSF2_ARATH Cleavage and polyadenylation specificity factor subunit 2; TrEMBL-Plants: tr\|A0A1J7HZX4\|A0A1J7HZX4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0141300	Domains Coil G3DSA:3.40.50.10890 G3DSA:3.60.15.10 IPR001279 IPR011108 IPR022712 IPR025069 IPR027075 IPR036866 PF07521 PF10996 PF13299 PF16661 PTHR45922 SM01027 SSF56281	16

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
SSF56281	SUPERFAMILY	1	20.00