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IPR022712 is a Beta-Casp domain.
<p>The beta-CASP domain is found C-terminal to the beta-lactamase domain in pre-mRNA 3'-end-processing endonuclease. The active site of this enzyme is located at the interface of these two domains [[cite:PUB00041631]].</p>
This description is obtained from EB-eye REST.
Transcript | Name | Description | Predicted domains | Domain count |
---|---|---|---|---|
– | PREDICTED: LOW QUALITY PROTEIN: cleavage and polyadenylation specificity factor subunit 3-II-like [Cicer arietinum] gi|502123758|ref|XP_004498247.1| | 12 | ||
– | PREDICTED: LOW QUALITY PROTEIN: cleavage and polyadenylation specificity factor subunit 3-II-like [Cicer arietinum] gi|502123758|ref|XP_004498247.1| | 9 | ||
– | PREDICTED: cleavage and polyadenylation specificity factor subunit 2-like isoform 1 [Glycine max] gi|356559788|ref|XP_003548179.1| | 10 | ||
– | PREDICTED: cleavage and polyadenylation specificity factor subunit 3-II-like [Glycine max] gi|356502382|ref|XP_003519998.1| | 10 | ||
– | PREDICTED: LOW QUALITY PROTEIN: cleavage and polyadenylation specificity factor subunit 3-II-like [Cicer arietinum] gi|502123758|ref|XP_004498247.1| | 7 | ||
– | PREDICTED: LOW QUALITY PROTEIN: cleavage and polyadenylation specificity factor subunit 3-II-like [Cicer arietinum] gi|502123758|ref|XP_004498247.1| | 9 | ||
– | PREDICTED: cleavage and polyadenylation specificity factor subunit 3-I-like [Cicer arietinum] gi|502076824|ref|XP_004485469.1| | 8 | ||
– | PREDICTED: LOW QUALITY PROTEIN: cleavage and polyadenylation specificity factor subunit 3-II-like [Cicer arietinum] gi|502123758|ref|XP_004498247.1| | 12 | ||
– | Cleavage and polyadenylation specificity factor subunit 3; TAIR: AT2G01730.1 cleavage and polyadenylation specificity factor 73 kDa subunit-II; Swiss-Prot: sp|Q8GUU3|CPS3B_ARATH Cleavage and polyadenylation specificity factor subunit 3-II; TrEMBL-Plants: tr|A0A072VR63|A0A072VR63_MEDTR Cleavage and polyadenylation specificity factor, putative; Found in the gene: LotjaGi1g1v0255900 | 16 | ||
– | Cleavage and polyadenylation specificity factor subunit 3; TAIR: AT2G01730.1 cleavage and polyadenylation specificity factor 73 kDa subunit-II; Swiss-Prot: sp|Q8GUU3|CPS3B_ARATH Cleavage and polyadenylation specificity factor subunit 3-II; TrEMBL-Plants: tr|A0A072VR63|A0A072VR63_MEDTR Cleavage and polyadenylation specificity factor, putative; Found in the gene: LotjaGi1g1v0255900 | 16 | ||
– | Cleavage and polyadenylation specificity factor subunit 3; TAIR: AT2G01730.1 cleavage and polyadenylation specificity factor 73 kDa subunit-II; Swiss-Prot: sp|Q8GUU3|CPS3B_ARATH Cleavage and polyadenylation specificity factor subunit 3-II; TrEMBL-Plants: tr|A0A072VR63|A0A072VR63_MEDTR Cleavage and polyadenylation specificity factor, putative; Found in the gene: LotjaGi1g1v0255900 | 16 | ||
– | Cleavage and polyadenylation specificity factor subunit 3; TAIR: AT2G01730.1 cleavage and polyadenylation specificity factor 73 kDa subunit-II; Swiss-Prot: sp|Q8GUU3|CPS3B_ARATH Cleavage and polyadenylation specificity factor subunit 3-II; TrEMBL-Plants: tr|A0A072VR63|A0A072VR63_MEDTR Cleavage and polyadenylation specificity factor, putative; Found in the gene: LotjaGi1g1v0255900 | 16 | ||
– | Cleavage and polyadenylation specificity factor subunit 3; TAIR: AT2G01730.1 cleavage and polyadenylation specificity factor 73 kDa subunit-II; Swiss-Prot: sp|Q8GUU3|CPS3B_ARATH Cleavage and polyadenylation specificity factor subunit 3-II; TrEMBL-Plants: tr|V7C7J5|V7C7J5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0072300 | 16 | ||
– | Cleavage and polyadenylation specificity factor subunit 3; TAIR: AT2G01730.1 cleavage and polyadenylation specificity factor 73 kDa subunit-II; Swiss-Prot: sp|Q8GUU3|CPS3B_ARATH Cleavage and polyadenylation specificity factor subunit 3-II; TrEMBL-Plants: tr|V7C7J5|V7C7J5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0072300 | 16 | ||
– | Cleavage and polyadenylation specificity factor subunit 2; TAIR: AT5G23880.1 cleavage and polyadenylation specificity factor 100; Swiss-Prot: sp|Q9LKF9|CPSF2_ARATH Cleavage and polyadenylation specificity factor subunit 2; TrEMBL-Plants: tr|A0A1J7HZX4|A0A1J7HZX4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0141300 | 17 | ||
– | Cleavage and polyadenylation specificity factor subunit 2; TAIR: AT5G23880.1 cleavage and polyadenylation specificity factor 100; Swiss-Prot: sp|Q9LKF9|CPSF2_ARATH Cleavage and polyadenylation specificity factor subunit 2; TrEMBL-Plants: tr|A0A1J7HZX4|A0A1J7HZX4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0141300 | 11 | ||
– | Cleavage and polyadenylation specificity factor subunit 2; TAIR: AT5G23880.1 cleavage and polyadenylation specificity factor 100; Swiss-Prot: sp|Q9LKF9|CPSF2_ARATH Cleavage and polyadenylation specificity factor subunit 2; TrEMBL-Plants: tr|A0A1J7HZX4|A0A1J7HZX4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0141300 | 17 | ||
– | Cleavage and polyadenylation specificity factor subunit 2; TAIR: AT5G23880.1 cleavage and polyadenylation specificity factor 100; Swiss-Prot: sp|Q9LKF9|CPSF2_ARATH Cleavage and polyadenylation specificity factor subunit 2; TrEMBL-Plants: tr|A0A1J7HZX4|A0A1J7HZX4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0141300 | 16 | ||
– | Integrator complex subunit-like protein; TAIR: AT3G07530.2 integrator complex subunit; Swiss-Prot: sp|A7SBF0|INT9_NEMVE Integrator complex subunit 9 homolog; TrEMBL-Plants: tr|A0A1J7GXA9|A0A1J7GXA9_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0112900 | 8 | ||
– | Integrator complex subunit-like protein; TAIR: AT3G07530.2 integrator complex subunit; Swiss-Prot: sp|A7SBF0|INT9_NEMVE Integrator complex subunit 9 homolog; TrEMBL-Plants: tr|A0A1J7GXA9|A0A1J7GXA9_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0112900 | 8 | ||
– | Integrator complex subunit-like protein; TAIR: AT3G07530.2 integrator complex subunit; Swiss-Prot: sp|A7SBF0|INT9_NEMVE Integrator complex subunit 9 homolog; TrEMBL-Plants: tr|A0A1J7GXA9|A0A1J7GXA9_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0112900 | 9 | ||
– | Cleavage and polyadenylation specificity factor subunit 3; TAIR: AT2G01730.1 cleavage and polyadenylation specificity factor 73 kDa subunit-II; Swiss-Prot: sp|Q8GUU3|CPS3B_ARATH Cleavage and polyadenylation specificity factor subunit 3-II; TrEMBL-Plants: tr|V7C7J5|V7C7J5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0053100 | 16 | ||
– | Cleavage and polyadenylation specificity factor subunit 3; TAIR: AT2G01730.1 cleavage and polyadenylation specificity factor 73 kDa subunit-II; Swiss-Prot: sp|Q8GUU3|CPS3B_ARATH Cleavage and polyadenylation specificity factor subunit 3-II; TrEMBL-Plants: tr|V7C7J5|V7C7J5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0053100 | 16 | ||
– | Cleavage and polyadenylation specificity factor subunit 3; TAIR: AT2G01730.1 cleavage and polyadenylation specificity factor 73 kDa subunit-II; Swiss-Prot: sp|Q8GUU3|CPS3B_ARATH Cleavage and polyadenylation specificity factor subunit 3-II; TrEMBL-Plants: tr|V7C7J5|V7C7J5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0053100 | 16 | ||
– | Cleavage and polyadenylation specificity factor subunit 3; TAIR: AT1G61010.1 cleavage and polyadenylation specificity factor 73-I; Swiss-Prot: sp|Q9C952|CPSF3_ARATH Cleavage and polyadenylation specificity factor subunit 3-I; TrEMBL-Plants: tr|K7LVE4|K7LVE4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0362400 | 19 | ||
– | Cleavage and polyadenylation specificity factor subunit 3; TAIR: AT1G61010.1 cleavage and polyadenylation specificity factor 73-I; Swiss-Prot: sp|Q9C952|CPSF3_ARATH Cleavage and polyadenylation specificity factor subunit 3-I; TrEMBL-Plants: tr|K7LVE4|K7LVE4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0362400 | 22 |
A list of co-occurring predicted domains within the L. japonicus gene space:
Predicted domain | Source | Observations | Saturation (%) |
---|---|---|---|
cd16292 | CDD | 1 | 3.85 |