Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0141300 |
| Transcript ID | LotjaGi2g1v0141300.3 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Cleavage and polyadenylation specificity factor subunit 2-like protein; TAIR: AT5G23880.1 cleavage and polyadenylation specificity factor 100; Swiss-Prot: sp|Q9LKF9|CPSF2_ARATH Cleavage and polyadenylation specificity factor subunit 2; TrEMBL-Plants: tr|A0A0B0PTU3|A0A0B0PTU3_GOSAR Cleavage and polyadenylation specificity factor subunit 2-like protein; Found in the gene: LotjaGi2g1v0141300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:51446214..51454903) extracted from Lotus japonicus Gifu genome v1.2.
ATGGGAACATCAGTGCAGGTAAAGCCACTGTGTGGAGTGTACAACGAGAACCCTCTCTCGTACTTGGTCTCCATTGATGG CTTCAACTTCCTCATCGACTGTGGTTGGAACGACCACTTCGACCCTTCCCTTCTTCAACCCCTCTCCAGGTTTCTTTCTT TCTTTCCTTTTCCCCAAATGGGTGTCTTGTATTTCAACCCCCCTTGTTTAAGTTTCATAGGGTCACAATATGATGTGATT TTGAGCTTCAAAGTGTTGGTTAGTAACAAATTGGGGTTTGTAATGTGGAAGACAATGCTTGTGAACTAGAAAGAAGGATT TTTTTCTTTTTTCTTTTTGTTGTTATAAATGACATTTGGAGCTTGAAAATATTGAATTTTTCATGTGGGGCATCTTGTAT TTCAAACCCCTCCTTGTTTCCCTTTCATAGAGTCACAATATGATGTGATTTTGAGCTCCAAAGTGTTGGTTAGTAACAAA TTGGGTTTTTTAATGTGGAAGGCAAAGGCAATGCTTATGAACTAGAAAAAATAACATTTTCCAGTTATAAATGTCACTGG GATTGATTTTTCAGAATGTTTGTATTCAATTATTATGTTTTGATTTGTTATTGATGTTGTGTGCTTTTTGGCATGTAGGG TAGCATCAACTATAGATGCTGTCTTGCTTTCGCACCCGGATACGCTTCACCTTGGTGCCCTCCCATATGCTATGAAGCAG CTTGGACTCTCTGCGCCTGTTTTTTCAACTGAGCCTGTCTACAGATTGGGCCTTCTCACTATGTATGACCAGTTCCTCTC AAGAAAGGTGAAATTTCATGCCAGATTTTTGGTTTGTTTGTTTTTACTATTAAGAGAAAGATGTTTTTCTGCTTGGTTTT TAGGCTGTTCGGTATCTTGTGTCCTTATCTGTGAGCTTTCCTATTTAACAATTAACTAGGACTAGGACAATACATATGTT TTAAAGCCAAATGGTTGGGTTAAGCTATCTTATTCTCTTGCAGCAAGTGTCGGAGTTTGATCTGTTCACGCTAGATGATA TTGATTCTGCTTTCCAAAGTGTAACAAGGCTAACATACTCTCAGAATCATCATCTCTCAGGTAGGGATTGAGACATTTGT TAGAATGTGTTGCGTTGAAGTGGTTGTATGCCTTCTCTTTGTTCTCTCCCCCCACCCTCTTTCAGTGTATAAATATTGGT TTGTTTCTAAGCCCTTATGCTTTATAAATTTATAATAAAATGAAATTCTCTACTTCCATGTTGCACACTTCCAAATATTC AGCAGCGTTGTTTATTTGTCACCTTTAATGGCATTTTAACTGCTGCTAGGCAAGGGAGAGGGAATTGTGATTGCACCTCA TGTTGCTGGGCATCTTTTGGGAGGTACGATATGGAAAATTACAAAGGATGGTGAGGACGTCATATATGCTGTTGATTTTA ATCATCGGAAAGAAAGGTAAATCTTTCTTTTTGTTTTCCACAGTTAAATTGATCCTATATATCTTTAGAGAGTTAAAAGG AAGCTACTTATCTACCTAATTTTCATTAGGCATTTGAATGGAACTGTTCTAGGTTCTTTTGTGCGGCCAGCAGTTCTAAT AACTGATGCTTATAATGCTTTGAACAATCAGCCTTACAGACGCCAAAAGGACAAAGAATTTGGAGGTAACTAACTTTTAA ATCCAACAACTGTGGCACTGCGACAGAACATAAAATTTTGTTTTCTCAAACTGCTCTTAAGAGGCGGAAATGTTTTTAGG CCCAGGACATTGACAGTGGACTAAAAAATCTTACCATGAAATGAAGAAAACTGTCTAGTATTTGTGTGCTTTATCTATGC TGATCATGTATCTTGTTGATTATTTAGATATCTTAAAGAAGACTCTTAGGTCAGGTGGCAATGTATTGCTCCCTATTGAC ACTGCAGGACGGGTGTTGGAACTTATTCTGATGCTAGAATCGGTCAGTACAGGAAATATGCTTTTACTCTTTTTCTCCCC CTTTTCCTGAATGTACATGTGAGTTAATGTGAGATCTTGGTTTTTGCAGTATTGGGCTGAAGAAAACTTGGTCTACCCCA TATATTTTCTTTCATATGTTTCATCCAGCACAATTGATTATGTAAAGAGTTTCCTTGAGTGGATGAGTGATACCATTGCA AAGTCTTTTGAACAAACGCGTGAAAATATATTTCTTTTGAAGTAAGTGATCTTGTCCTTAAATTTGAAGAAATATTTATT TTTTTGGTTCACGTGGATGCTATAAAACGTTATTGATTATTAGCATTTCAAACTTATATTACTTTGAGTTTCTTGAGATA TTGGTAAAAAATGGTTTTATGCAATTATGAGTAAAAATGAGCTTTGAAAACTTTAAGGTTTGCAAACTTTAAGGATCTTT GCTGTAGACTGATCTAGAAAATAGTTAATCTCCTCTTTTTTTAATTGCTAATGTTATCTTGTGTCTAAAACTAAGCTGCA ATGCTCGTGCCTGCAGGTATATTACACTTCTGGTTAACAAGACTGAGCTTGATAATGTTCCAGATGGTCCAAAGGTTGAA TAATTTGTATGTTTTGTTTTTCATCAAACCATCTTCTTTACTGACTCTGATTCATCATTCATGTATCTTGTACAGGTTGT TCTAGCATCCATGGCAAGTTTGGAAGCAGGTTTTTCTCATGATATATTTGTTGAGTGGGGCAGTGATGTAAAAAATCTCG TGCTTTTTACTGAAAAAGGCCAGGTATTTTTTTTTTTGTAAAATATCCTTTCTCTCTTGTTACGTGTTTCAGAATTGATG TGAATCCCTACAAGCTATAGTAGGGTTTCGCTACTTGGAACCTGCTAATTGATCAAGGGCTGCTTCTTGGAGTTGACTTT ATAGTTGCTTTTGTATTTTAAATATCAATATTAAGCTTGTTTTAGTTTTTTCTGAGGCTTTCTGAAGATTAAAATAATGA GATGAAAAATTCTGAGGGCAATGTATTTGTAAAGTGTAATTGAAATGAATTGCAATAAATTAAGCTGTTTGGATATTTAA TACTGATAATTTGGAAAGTAGTGGGACTTCTATTGGGCCTTTTTTAAAAACTAAACCCAAGGAATTTCAAATACTACATC TCTTGTGATCATTCCAAAATTCCAAGAGCGTCTATCACTAAGCTCATTCTCTCTTCACTACTCTTCCTTCTATCTTCGGA CTCGTAATAGAGATAATAAAGTGGTGACTCAAAGAAGTCCCACATTGCCAAGATTAGCAAGTGCACAAGTGCATATATAA TAAAGAACACACACACCCATTGCCTTAAGCCTAAGGTTTTGTGGTGTGTGGTTCTATAGGATTTCTATCATGGTATTAAT AGAGATAATAAAGTGGTGACTCAAAGAAGTCCCACATTGCCAAGATTAGCAAGTGCACAAGTGCATATATAATAAAGAAC ACACACACCCATTGCCTTAAGCCTAAGGTTTTGTGGTGTGTGGTTCTATAGGATTTCTATCATGGTATTAATAGAGATAA TAAAGTGGTGACTCAAAGAAGTCCCACATTGCCAAGATTAGCAAGTGCACAAGTGCATATATAATAAAGAACACACACAC CCATTGCCTTAAGCCTAAGGTTTTGTGGTGTTGTGTGGTTCTAACTTAGGAATTCTAACATGGTATCAGAGCTGGTCTGA TCCAAGCCATGACTGCCGCTTCCCAAAAAAAAACGAAAAAAAAAAAGTAAAAAAAAAAAAAGCAAAAATGGCAGTCCCAT TTGCGCAAGCCAAGACCTCAGACTCAGACGAAGGAGCACAAGTCCAAGGAACTCCGATGTTCCCGCTAGAGTACTAGCCC AGACAAAGAAAGTCGAAAGGCAGACTCAGACGAAGGAGCACAAGTCTGACGACCACTGATGTTCCCGCTAGAGTGCAAGG CACAGGCAAAAAAAAATAAAAATGGAGTCCCAATTGAGGGGGAGTAATAGAGATAATAAAGTGGTGACTCAAAGAAGTCC CACATTGCCAAGATTAGCAGGTGCACAAGTGCATATATAATAAAGAACACACACACCCATTGCCTTAAGCCTAAGGTTTT GTGGTGTTGTGTGGTTCTAACTTAGGATTTCTAACAACTCGGCACTCTCTGAATTTTCGTGTACCTTTGATCTTGTGAGA TTCATTCTCTCTAGCTTCCTCAGGTTTTCACTCTCTTTATCTCTGTTGAATATATGTTAAGCTTAAATCTATCTCTTTGC TGAGATAAGACTAATAACAAACTAAATCTGAACAGATATTGCACAATCTCTTTGCTGAGCTTTGATCTTCCTTCTCTTAG CTTCAGATCTAGATGCACTTGTACCATTGGAGCTTATAATTTTCTTCTTATGCAGAACGAAAATATTGTCTAGAGGGTTA TTGGTGCAAATGCAATGGTTATATCTTGGTTATGTGAAAAGCGGTGGGAATCCAACAAAAACTACAATACCAATAAAGGG TATTATCTGCAAAACAAGACATAGAGTTGGGCCTAATTTGTTACTTTGGAAAGCCAGACAAGATATTTTATAAATGATAG TAGTTTAATTGAACCAATTCAATTTCTTAGAAGTTAGAATTTCAAATCCTTTGAAAATTTGAGATAAGGTATTCAAACAC GGGGTTACTGTATCTCTTTTGTTTTTCCTTTTTATTATCACTGTGTTGTAAACTATCGCACGTTGTATCTTTTCTCCCGT TAACCTTTCAGGTTAATATTTCAAATTCTCTTCTATAAAAATGCTTTATATCAGTGCTAATGATGCTAGCTACTTAACAT ATTTGTTTGCTATCTTATGTTTACTGATCCTTATCTTTTTGGATGCATAGTTTGCCACACTAGCTCGTATGCTTCAGGCT GATCCACCTCCAAAAGCTGTCAAAGTCACTGTGTCCAAGCGTGTTCCTTTGGTTGGCGATGAGCTAATTGCCTATGAGGA AGAGCAAAATCGAATAAAGAAAGAAGAAGCTTTAAAAGCCAGTCTTATAAAGGCGGAAGAATTGAAAGCATCTCATGGGG CTGATAGTAATACAAGTGATCCAATGGTCATTGATACTGGCAATAATCTTGTAGCACCAGAAGGTGTGTGTTGTATAAAT TATTTTGGAGCTAATCTCTTTGAAGTGTTTCCCTTTTCCAGTTTTTCCTTAAGTAGGAGATATAACACATTTGGCATTGT TTTCTTGTTAGTAAACGCTTTCACTTAGGTGTTGAGAATTATCCACTTCATATTCTTGCTAAAAAAAAAATGACCGAACT TCACATATTGCCATTGGTTGGTGTTGCAAACCAACCATTTCGTCATATTAAACAAACTGGATGAACTGTGAGATTTTACC TTGTTGAAACATTTATCACTATTTTATGAACGTGTTAATCGGATATTACAATGTATTATAATTAATACCATCATTTGATA TTAACCTTAAATTTGTCTACAATATTATGAGTTTATCTATTATTTTGCGCCTTGTGGAAAGTTTTTTATGATTTGTTTGT TTTTTTATTTTTTTGAATTGCATTTGCAGTGGCTGGTCCACGAGGTGGAGGATACCGGGACATATTTGTTGATGGATTTG TTCCCCCTTCAACAAGTGTTGCCCCAATGTTTCCCTGTTATGAAAATACGTCTGAGTGGGATGATTTTGGTGAAGTCATA AATCCAGATGATTATGTAATTAAGGACGAAGACATGGACCAGACAGCAATGCATGTGAGTTTCCTTTTCAAAATAACTAC CTTATTACTTCCCAGTTTGAATATAATTATTCGTGTCAGTATTTAATTTGACACTTAATGTCTACATCATGCTTGTTTTC GGAGTTAGAAATTTCTCTGAACTCTGAATCAATTACAACGACTTTACTTATTTAAAAGCATGCCAAGACTTGCCAAATAT AAAGGTCAATGATATCAATGCATTACAAAGTAGTAGGAAACTTTATAAAGGAAAAGCTACAATACAGGAATCATAAGCTT AATAACTTGCTTTGGTCTATTTTGTGTTTGGCTTGGTTGCTTCTATATATCTTTAACTGTTCTCGTCCTTGAAATTTCGA TGAAATGTGATACATTCTGCTTCTAACCATGAAATCTTTTGCCACATCTAATTTTTCTGGTGTTTTGTATTAATAATTAT ATTTTTTAAATATTTTTTCCTATTTTTCTATCAGGTAGGAGGTGATATAAATGGAAAACTAGATGAAGGTGCTGCGAGTT TAATACTTGATACAAAGCCATCAAAAGTCATATCTGATGAAAGGACTGTAAGCTGCTGTATCTTTGTCTTGTATTTGAAA GCTTCTTATATATATTAAACTTATATATTTGTGTTTCTATTTGAATTTGATACTGTTGTATTTGGTAATTGATTGGACAA ACCAAGTTAAATCTCTTTAACTGTCTCAATTCTTTCACTGAGTGCCATTAAAATTTTTTATTGCTTTCACAAAGATTAGA AATCTACATGTTTAGATTTTACAAAAGATGCTGTTATGTAAGTTTTTTTGAGTTATACTATCCTGCTACTGCGTTGATCT TCAAACATGTTCTATATATATGTAACAGAGTTGCAACACATTCATGGTTTTGTCCAGGTGCAAGTCAGGTGTTCCTTGGT ATACATGGACTTTGAAGGCCGTTCAGATGGAAGATCCATTAAAAATATTCTCTCCCATGTGGCTCCCCTGAAGCTGGTAT GGATCTCTTTGGTGCTTTTCAGTTTACTGAAATACATAATTGAATCTTTTTTAACTTGTATTTGGAAGTTCATTATTTGT GGAATGGAAAACAACTGAGGTAGTCATATCTTGCCACCATTGAAAATCATCTGATCTTGGAAATAACTCATTTTAACTAA CATACAATTTTTGAAAGCAAAGCAATAATCTGGCTTCCATTTTAAGTGGGTTTGTGTTGGTCGGGGAGCTCTGGAAACGG CTGTTGTAATGTTGGGAAGGGTAACTATCGGGGGAAAAAATTCATGGTTTGAGTTGAGCACTTTTGAATGGGCATGTAAA ACCTTAGTTATCAATAACATGCTGTCTTTATTAGAATGGGCATGTGTGTGTGTGTGTGTGCATGCGCGCACACATACATA CATATACATATGCACGTGTGTGTCAGCATTCAATTGAACTTAAATCGTAAATGCATAAGGTCACGTAACTCACCAAGTAA TGGCATGAGCTGTTGACAACATGTAAAACCTTAGTTATCAATGACAAGCTGTCTTTATTAGAATGGACCCTATTGTTTTC GTGTCGGTTTTTCCTTCCACTTCGTAGTTCATATTCCCCTAATTTCTGTCTGTCATATTATTTTCAACTTTGGTCTTTGT TTACATGTCTAATGTATTCTGTATTTATCTATTAATTATGTTTTTTCTCTCCCTGTGTTCTCATTCTTATCAATTATGAA TTTGTCTTCAATTTTAGGTTCATTTTTGAAAATGTAAGGCATATAACTGATAAATAATCTGTGCATGTACTCTTGTATAG ATATTGTGATCCAGCTGGTTTAAGGAACCAACTTTTATGTTCATATCATCTGTTTTTTGTTTTTGTATCAAGCATGATGA ATACTTATGATTTTTCTGGAAGGTTTTGGTGCATGGGTCAGCTGAAGCTACGGAGCATCTGAAGCAGCATTGCCTGAAGA ATGTGTGTCCTCACGTTTATGCTCCCCAAATTGAAGAGACAATTGATGTTACCTCTGATTTATGTGCTTATAAGGTACAA CGATGTCAACTTTTGTAAATTTTCTGAGGCAAACAAGATGTCAAAATTAATCTTGTCTGGCATTTCTGGTTATAGGTTCA ACTATCTGAGAAGCTAATGAGTAATGTACTCTTCAAGAAGGTAAATGATAGATGTCTGAACTATTTCAATTTAAATACTC TTCTTTACCAGTTTGTATAGAAATCATCATGTTGAATGATGAATTCAATTCAACTGCAGCTGGGAGATTATGAAGTAGCT TGGGTTGATGCTGAAGTAGGGAAAGCAGAAAATGACACGCTCTCGCTGCTGCCTGTTTCCGGAGCAACTCCTCCGCATAA ATCTGTTCTTGTTGGTGATTTGAAATTGGCAGATTTCAAGCAGTTCCTCTCCAGCAAGGGTGTTCAGGTAATTCCTAAGC TATAGACTTATCGTACCGATTCCTCCTTGCTCCAATTGTCTACTGGTAATCGTCATGGAAACTGATCATGTAAAGGCTGA TAAGTTTTATTGTTTATTTTTTTTTGAATGATGGTTACTGTTCTGCAACAGAAATTTGAGTGAGAAAAATTAGTGAAACA ACTGAATATCTACTTTATAAAAAAATATGAATCATGACATGATACCCTTTATGTAGGTGGAATTTGCTGGTGGGGCTTTG CGTTGCGGTGAATATGTAACTGTCCGGAAGGTTGGGGATGCAAGTCAGAAGGCAAGTTCTCCTTCTTAACATTTGTTAAT TAATTAGATTCATACATTCTTTAGGATATTGATCATTTTCCAATGCAGCTGAGATTATCCAGTTTCTCTTTCAAGATTCT GATCTATTAAGATGATGTTTTTTGATAGGGTGCTGGTTCTGGTACACAGCAAATTATTATTGAAGGCCCCCTGTGTGAAG ATTACTATAAAATTCGCGAATATCTCTATTCACAGTTTTATTTGCTTTAG
CDS sequence (LotjaGi2g1v0141300.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGAACATCAGTGCAGGTAAAGCCACTGTGTGGAGTGTACAACGAGAACCCTCTCTCGTACTTGGTCTCCATTGATGG CTTCAACTTCCTCATCGACTGTGGTTGGAACGACCACTTCGACCCTTCCCTTCTTCAACCCCTCTCCAGGGTAGCATCAA CTATAGATGCTGTCTTGCTTTCGCACCCGGATACGCTTCACCTTGGTGCCCTCCCATATGCTATGAAGCAGCTTGGACTC TCTGCGCCTGTTTTTTCAACTGAGCCTGTCTACAGATTGGGCCTTCTCACTATGTATGACCAGTTCCTCTCAAGAAAGCA AGTGTCGGAGTTTGATCTGTTCACGCTAGATGATATTGATTCTGCTTTCCAAAGTGTAACAAGGCTAACATACTCTCAGA ATCATCATCTCTCAGGCAAGGGAGAGGGAATTGTGATTGCACCTCATGTTGCTGGGCATCTTTTGGGAGGTACGATATGG AAAATTACAAAGGATGGTGAGGACGTCATATATGCTGTTGATTTTAATCATCGGAAAGAAAGGCATTTGAATGGAACTGT TCTAGGTTCTTTTGTGCGGCCAGCAGTTCTAATAACTGATGCTTATAATGCTTTGAACAATCAGCCTTACAGACGCCAAA AGGACAAAGAATTTGGAGATATCTTAAAGAAGACTCTTAGGTCAGGTGGCAATGTATTGCTCCCTATTGACACTGCAGGA CGGGTGTTGGAACTTATTCTGATGCTAGAATCGTGGGGCAGTGATGTAAAAAATCTCGTGCTTTTTACTGAAAAAGGCCA GTTTGCCACACTAGCTCGTATGCTTCAGGCTGATCCACCTCCAAAAGCTGTCAAAGTCACTGTGTCCAAGCGTGTTCCTT TGGTTGGCGATGAGCTAATTGCCTATGAGGAAGAGCAAAATCGAATAAAGAAAGAAGAAGCTTTAAAAGCCAGTCTTATA AAGGCGGAAGAATTGAAAGCATCTCATGGGGCTGATAGTAATACAAGTGATCCAATGGTCATTGATACTGGCAATAATCT TGTAGCACCAGAAGTGGCTGGTCCACGAGGTGGAGGATACCGGGACATATTTGTTGATGGATTTGTTCCCCCTTCAACAA GTGTTGCCCCAATGTTTCCCTGTTATGAAAATACGTCTGAGTGGGATGATTTTGGTGAAGTCATAAATCCAGATGATTAT GTAATTAAGGACGAAGACATGGACCAGACAGCAATGCATGTAGGAGGTGATATAAATGGAAAACTAGATGAAGGTGCTGC GAGTTTAATACTTGATACAAAGCCATCAAAAGTCATATCTGATGAAAGGACTGTGCAAGTCAGGTGTTCCTTGGTATACA TGGACTTTGAAGGCCGTTCAGATGGAAGATCCATTAAAAATATTCTCTCCCATGTGGCTCCCCTGAAGCTGGTTTTGGTG CATGGGTCAGCTGAAGCTACGGAGCATCTGAAGCAGCATTGCCTGAAGAATGTGTGTCCTCACGTTTATGCTCCCCAAAT TGAAGAGACAATTGATGTTACCTCTGATTTATGTGCTTATAAGGTTCAACTATCTGAGAAGCTAATGAGTAATGTACTCT TCAAGAAGCTGGGAGATTATGAAGTAGCTTGGGTTGATGCTGAAGTAGGGAAAGCAGAAAATGACACGCTCTCGCTGCTG CCTGTTTCCGGAGCAACTCCTCCGCATAAATCTGTTCTTGTTGGTGATTTGAAATTGGCAGATTTCAAGCAGTTCCTCTC CAGCAAGGGTGTTCAGGTGGAATTTGCTGGTGGGGCTTTGCGTTGCGGTGAATATGTAACTGTCCGGAAGGGTGCTGGTT CTGGTACACAGCAAATTATTATTGAAGGCCCCCTGTGTGAAGATTACTATAAAATTCGCGAATATCTCTATTCACAGTTT TATTTGCTTTAG
Protein sequence (LotjaGi2g1v0141300.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGTSVQVKPLCGVYNENPLSYLVSIDGFNFLIDCGWNDHFDPSLLQPLSRVASTIDAVLLSHPDTLHLGALPYAMKQLGL SAPVFSTEPVYRLGLLTMYDQFLSRKQVSEFDLFTLDDIDSAFQSVTRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTIW KITKDGEDVIYAVDFNHRKERHLNGTVLGSFVRPAVLITDAYNALNNQPYRRQKDKEFGDILKKTLRSGGNVLLPIDTAG RVLELILMLESWGSDVKNLVLFTEKGQFATLARMLQADPPPKAVKVTVSKRVPLVGDELIAYEEEQNRIKKEEALKASLI KAEELKASHGADSNTSDPMVIDTGNNLVAPEVAGPRGGGYRDIFVDGFVPPSTSVAPMFPCYENTSEWDDFGEVINPDDY VIKDEDMDQTAMHVGGDINGKLDEGAASLILDTKPSKVISDERTVQVRCSLVYMDFEGRSDGRSIKNILSHVAPLKLVLV HGSAEATEHLKQHCLKNVCPHVYAPQIEETIDVTSDLCAYKVQLSEKLMSNVLFKKLGDYEVAWVDAEVGKAENDTLSLL PVSGATPPHKSVLVGDLKLADFKQFLSSKGVQVEFAGGALRCGEYVTVRKGAGSGTQQIIIEGPLCEDYYKIREYLYSQF YLL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 251 | 251 | 2.0E-266 | ||
| SUPERFAMILY | 5 | 513 | 509 | 1.85E-115 | ||
| Gene3D | 7 | 264 | 258 | 6.7E-77 | ||
| CDD | 9 | 203 | 195 | 1.75011E-113 | ||
| Pfam | 22 | 188 | 167 | 1.1E-55 | ||
| PANTHER | 249 | 642 | 394 | 2.0E-266 | ||
| Coils | 302 | 322 | 21 | - | – | |
| Gene3D | 427 | 456 | 30 | 2.4E-5 | – | |
| Pfam | 444 | 495 | 52 | 5.2E-12 | ||
| Gene3D | 457 | 491 | 35 | 2.4E-5 | ||
| Pfam | 553 | 640 | 88 | 6.8E-20 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | MRNA cleavage and polyadenylation specificity factor complex | A multisubunit complex that binds to the canonical AAUAAA hexamer and to U-rich upstream sequence elements on the pre-mRNA, thereby stimulating the otherwise weakly active and nonspecific polymerase to elongate efficiently RNAs containing a poly(A) signal. | ||
| Biological process | MRNA polyadenylation | The enzymatic addition of a sequence of 40-200 adenylyl residues at the 3' end of a eukaryotic mRNA primary transcript. | ||
| Biological process | MRNA cleavage | Any process in which a pre-mRNA or mRNA molecule is cleaved at specific sites or in a regulated manner. |
Expression pattern of LotjaGi2g1v0141300.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…