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PR00141

Source: PRINTS

Description

Proteasome component signature

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004175
Molecular function Endopeptidase activity Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain.
Subterm of
GO:0005839
Cellular component Proteasome core complex A multisubunit barrel shaped endoprotease complex, which is the core of the proteasome complex.
Subterm of
Part of
GO:0051603
Biological process Proteolysis involved in cellular protein catabolic process The hydrolysis of a peptide bond or bonds within a protein as part of the chemical reactions and pathways resulting in the breakdown of a protein by individual cells.
Subterm of
Part of

Associated Lotus transcripts 13

Transcript Name Description Predicted domains Domain count
Lj0g3v0261409.1
– PREDICTED: proteasome subunit beta type-5-like [Glycine max] gi|356516569|ref|XP_003526966.1|
Domains
14
Lj1g3v2001850.1
– PREDICTED: proteasome subunit beta type-6-like [Cicer arietinum] gi|502132065|ref|XP_004501214.1|
Domains
14
Lj1g3v2001850.2
– PREDICTED: proteasome subunit beta type-6-like [Glycine max] gi|356507848|ref|XP_003522675.1|
Domains
14
Lj5g3v1601800.1
– Proteasome subunit beta type [Medicago truncatula] gi|357504055|ref|XP_003622316.1|
Domains
14
LotjaGi1g1v0237700.1
– Proteasome subunit beta type; TAIR: AT3G26340.1 N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein; Swiss-Prot: sp|O24361|PSB5_SPIOL Proteasome subunit beta type-5; TrEMBL-Plants: tr|I3T0L3|I3T0L3_LOTJA Proteasome subunit beta type; Found in the gene: LotjaGi1g1v0237700
Domains
14
LotjaGi1g1v0237700.2
– Proteasome subunit beta type; TAIR: AT3G26340.1 N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein; Swiss-Prot: sp|O24361|PSB5_SPIOL Proteasome subunit beta type-5; TrEMBL-Plants: tr|I3T0L3|I3T0L3_LOTJA Proteasome subunit beta type; Found in the gene: LotjaGi1g1v0237700
Domains
14
LotjaGi1g1v0397200.1
– Proteasome subunit beta type; TAIR: AT4G31300.1 N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein; Swiss-Prot: sp|Q8LD27|PSB6_ARATH Proteasome subunit beta type-6; TrEMBL-Plants: tr|I3SPC4|I3SPC4_LOTJA Proteasome subunit beta type; Found in the gene: LotjaGi1g1v0397200
Domains
14
LotjaGi2g1v0125900.1
– Proteasome subunit beta type; TAIR: AT5G40580.1 20S proteasome beta subunit PBB2; Swiss-Prot: sp|Q7DLS1|PSB7B_ARATH Proteasome subunit beta type-7-B; TrEMBL-Plants: tr|I3STF0|I3STF0_LOTJA Proteasome subunit beta type; Found in the gene: LotjaGi2g1v0125900
Domains
14
LotjaGi2g1v0125900.2
– Proteasome subunit beta type; TAIR: AT5G40580.1 20S proteasome beta subunit PBB2; Swiss-Prot: sp|Q7DLS1|PSB7B_ARATH Proteasome subunit beta type-7-B; TrEMBL-Plants: tr|I3STF0|I3STF0_LOTJA Proteasome subunit beta type; Found in the gene: LotjaGi2g1v0125900
Domains
14
LotjaGi2g1v0125900.3
– Proteasome subunit beta type; TAIR: AT5G40580.1 20S proteasome beta subunit PBB2; Swiss-Prot: sp|Q7DLS1|PSB7B_ARATH Proteasome subunit beta type-7-B; TrEMBL-Plants: tr|I3STF0|I3STF0_LOTJA Proteasome subunit beta type; Found in the gene: LotjaGi2g1v0125900
Domains
14
LotjaGi5g1v0246600.3
– Proteasome subunit beta type; TAIR: AT5G40580.3 20S proteasome beta subunit PBB2; Swiss-Prot: sp|Q7DLS1|PSB7B_ARATH Proteasome subunit beta type-7-B; TrEMBL-Plants: tr|I3STF0|I3STF0_LOTJA Proteasome subunit beta type; Found in the gene: LotjaGi5g1v0246600
Domains
12
LotjaGi5g1v0246600.4
– Proteasome subunit beta type; TAIR: AT5G40580.1 20S proteasome beta subunit PBB2; Swiss-Prot: sp|Q7DLS1|PSB7B_ARATH Proteasome subunit beta type-7-B; TrEMBL-Plants: tr|I3STF0|I3STF0_LOTJA Proteasome subunit beta type; Found in the gene: LotjaGi5g1v0246600
Domains
14
LotjaGi5g1v0246600.5
– Proteasome subunit beta type; TAIR: AT5G40580.1 20S proteasome beta subunit PBB2; Swiss-Prot: sp|Q7DLS1|PSB7B_ARATH Proteasome subunit beta type-7-B; TrEMBL-Plants: tr|I3STF0|I3STF0_LOTJA Proteasome subunit beta type; Found in the gene: LotjaGi5g1v0246600
Domains
14

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
cd03763 CDD 1 7.69