Domain Predictions — View

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PS00165

Source: ProSitePatterns

Description

Serine/threonine dehydratases pyridoxal-phosphate attachment site.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on April 27, 2020, while the GO metadata was last updated on April 27, 2020.

GO term	Namespace	Name	Definition	Relationships
GO:0006520 View details of GO:0006520 AmiGO InterPro QuickGO	Biological process	Cellular amino acid metabolic process	The chemical reactions and pathways involving amino acids, carboxylic acids containing one or more amino groups, as carried out by individual cells.	Subterm of GO:0019752 GO:0044238 GO:1901564
GO:0030170 View details of GO:0030170 AmiGO InterPro QuickGO	Molecular function	Pyridoxal phosphate binding	Interacting selectively and non-covalently with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6.	Subterm of GO:0043168 GO:0050662 GO:0070279

Associated Lotus transcripts 15

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0168489.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: threonine dehydratase biosynthetic, chloroplastic-like isoform X1 [Cicer arietinum] gi\|502122057\|ref\|XP_004497558.1\|	Domains G3DSA:3.40.50.1100 IPR000634 IPR001926 PF00291 PS00165 PTHR10314 PTHR10314:SF30 SSF53686 mobidb-lite	9
Lj1g3v4450420.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: threonine dehydratase biosynthetic, chloroplastic-like [Glycine max] gi\|356548297\|ref\|XP_003542539.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:3.40.1020.10 G3DSA:3.40.50.1100 IPR000634 IPR001721 IPR001926 IPR005787 NON_CYTOPLASMIC_DOMAIN PF00291 PF00585 PS00165 PS51672 PTHR10314 PTHR10314:SF30 SSF53686 SSF55021 TIGR01124 TRANSMEMBRANE cd01562 cd04906 cd04907 mobidb-lite	22
Lj3g3v0336700.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Threonine synthase [Lens culinaris] gi\|430736179\|gb\|AGA60119.1\|	Domains G3DSA:3.40.50.1100 IPR000634 IPR001926 IPR004450 PF00291 PS00165 PTHR10314 PTHR10314:SF125 SSF53686 TIGR00260 cd01563 mobidb-lite	12
Lj3g3v0338910.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: threonine synthase, chloroplastic-like [Cicer arietinum] gi\|502081416\|ref\|XP_004486860.1\|	Domains G3DSA:3.40.50.1100 IPR000634 IPR001926 IPR004450 PF00291 PS00165 PTHR10314 PTHR10314:SF125 SSF53686 TIGR00260 cd01563	11
Lj4g3v2176090.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–		Domains G3DSA:3.40.50.1100 IPR000634 IPR001926 IPR004450 PF00291 PS00165 PTHR10314 PTHR10314:SF125 SSF53686 TIGR00260 cd01563 mobidb-lite	12
Lj4g3v2951170.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: probable serine racemase-like [Glycine max] gi\|356513403\|ref\|XP_003525403.1\|	Domains G3DSA:3.40.50.1100 IPR000634 IPR001926 PF00291 PS00165 PTHR10314 PTHR10314:SF36 SSF53686 cd01562	9
Lj5g3v0691270.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Threonine dehydratase biosynthetic [Medicago truncatula] gi\|357440267\|ref\|XP_003590411.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:3.40.50.1100 IPR000634 IPR001926 NON_CYTOPLASMIC_DOMAIN PF00291 PS00165 PTHR10314 PTHR10314:SF30 SSF53686 TMhelix TRANSMEMBRANE cd01562	13
LotjaGi1g1v0714200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Threonine dehydratase; TAIR: AT3G10050.1 L-O-methylthreonine resistant 1; Swiss-Prot: sp\|Q9ZSS6\|THD1_ARATH Threonine dehydratase biosynthetic, chloroplastic; TrEMBL-Plants: tr\|A0A0L9TWQ1\|A0A0L9TWQ1_PHAAN Threonine dehydratase; Found in the gene: LotjaGi1g1v0714200	Domains CYTOPLASMIC_DOMAIN G3DSA:3.40.1020.10 G3DSA:3.40.50.1100 IPR000634 IPR001721 IPR001926 IPR005787 IPR036052 IPR038110 NON_CYTOPLASMIC_DOMAIN PF00291 PF00585 PS00165 PS51672 PTHR43714 SSF53686 SSF55021 TIGR01124 TRANSMEMBRANE cd01562 cd04906 cd04907 mobidb-lite	23
LotjaGi3g1v0029100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Threonine synthase; TAIR: AT4G29840.1 Pyridoxal-5'-phosphate-dependent enzyme family protein; Swiss-Prot: sp\|Q9S7B5\|THRC1_ARATH Threonine synthase 1, chloroplastic; TrEMBL-Plants: tr\|L0EK99\|L0EK99_LENCU Threonine synthase; Found in the gene: LotjaGi3g1v0029100	Domains G3DSA:3.40.50.1100 IPR000634 IPR001926 IPR004450 IPR036052 PF00291 PS00165 PTHR10314 PTHR10314:SF176 SSF53686 TIGR00260 cd01563 mobidb-lite	13
LotjaGi4g1v0328200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Threonine synthase; TAIR: AT4G29840.1 Pyridoxal-5'-phosphate-dependent enzyme family protein; Swiss-Prot: sp\|Q9S7B5\|THRC1_ARATH Threonine synthase 1, chloroplastic; TrEMBL-Plants: tr\|L0EIQ2\|L0EIQ2_CICAR Threonine synthase; Found in the gene: LotjaGi4g1v0328200	Domains G3DSA:3.40.50.1100 IPR000634 IPR001926 IPR004450 IPR036052 PF00291 PS00165 PTHR10314 PTHR10314:SF182 SSF53686 TIGR00260 cd01563 mobidb-lite	13
LotjaGi4g1v0328200.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Threonine synthase; TAIR: AT4G29840.1 Pyridoxal-5'-phosphate-dependent enzyme family protein; Swiss-Prot: sp\|Q9S7B5\|THRC1_ARATH Threonine synthase 1, chloroplastic; TrEMBL-Plants: tr\|L0EIQ2\|L0EIQ2_CICAR Threonine synthase; Found in the gene: LotjaGi4g1v0328200	Domains G3DSA:3.40.50.1100 IPR000634 IPR001926 IPR004450 IPR036052 PF00291 PS00165 PTHR10314 PTHR10314:SF182 SSF53686 TIGR00260 cd01563 mobidb-lite	13
LotjaGi4g1v0425000.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Threonine dehydratase; TAIR: AT4G11640.1 serine racemase; Swiss-Prot: sp\|Q2PGG3\|SRR_ARATH Serine racemase; TrEMBL-Plants: tr\|A0A1J7FZS3\|A0A1J7FZS3_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0425000	Domains G3DSA:3.40.50.1100 IPR000634 IPR001926 IPR036052 PF00291 PS00165 PTHR43050 SSF53686 cd01562	9
LotjaGi4g1v0425000.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Threonine dehydratase; TAIR: AT4G11640.1 serine racemase; Swiss-Prot: sp\|Q2PGG3\|SRR_ARATH Serine racemase; TrEMBL-Plants: tr\|A0A1J7FZS3\|A0A1J7FZS3_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0425000	Domains G3DSA:3.40.50.1100 IPR000634 IPR001926 IPR036052 PF00291 PS00165 PTHR43050 SSF53686 cd01562	9
LotjaGi5g1v0089100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Threonine dehydratase; TAIR: AT3G10050.1 L-O-methylthreonine resistant 1; Swiss-Prot: sp\|Q9ZSS6\|THD1_ARATH Threonine dehydratase biosynthetic, chloroplastic; TrEMBL-Plants: tr\|A0A0L9TWQ1\|A0A0L9TWQ1_PHAAN Threonine dehydratase; Found in the gene: LotjaGi5g1v0089100	Domains G3DSA:3.40.1020.10 G3DSA:3.40.50.1100 IPR000634 IPR001721 IPR001926 IPR005787 IPR036052 IPR038110 PF00291 PF00585 PS00165 PS51672 PTHR43714 SSF53686 SSF55021 TIGR01124 cd01562 cd04906 cd04907 mobidb-lite	20
LotjaGi5g1v0089100.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Threonine dehydratase; TAIR: AT3G10050.1 L-O-methylthreonine resistant 1; Swiss-Prot: sp\|Q9ZSS6\|THD1_ARATH Threonine dehydratase biosynthetic, chloroplastic; TrEMBL-Plants: tr\|A0A0L9TWQ1\|A0A0L9TWQ1_PHAAN Threonine dehydratase; Found in the gene: LotjaGi5g1v0089100	Domains G3DSA:3.40.1020.10 G3DSA:3.40.50.1100 IPR000634 IPR001721 IPR001926 IPR005787 IPR036052 IPR038110 PF00291 PF00585 PS00165 PS51672 PTHR43714 SSF53686 SSF55021 TIGR01124 cd01562 cd04906 cd04907	19

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
cd04907	CDD	1	6.67