Domain Predictions — View

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PTHR10848:SF4

Source: PANTHER

Description

No description is available for this domain.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 5

Transcript	Name	Description	Predicted domains	Domain count
LotjaGi2g1v0088900_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	DNA topoisomerase 6 subunit A; TAIR: AT5G02820.1 Spo11/DNA topoisomerase VI, subunit A protein; Swiss-Prot: sp\|A2XFC1\|TOP6A_ORYSI DNA topoisomerase 6 subunit A3; TrEMBL-Plants: tr\|A0A061R4D2\|A0A061R4D2_9CHLO DNA topoisomerase 6 subunit A; Found in the gene: LotjaGi2g1v0088900_LC	Domains G3DSA:3.40.1360.10 IPR002815 IPR013049 IPR036078 PF04406 PR01550 PTHR10848 PTHR10848:SF4 SSF56726	9
LotjaGi2g1v0088900_LC.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	DNA topoisomerase 6 subunit A; TAIR: AT5G02820.1 Spo11/DNA topoisomerase VI, subunit A protein; Swiss-Prot: sp\|Q9LZ03\|TOP6A_ARATH DNA topoisomerase 6 subunit A; TrEMBL-Plants: tr\|A0A061R4D2\|A0A061R4D2_9CHLO DNA topoisomerase 6 subunit A; Found in the gene: LotjaGi2g1v0088900_LC	Domains G3DSA:3.40.1360.10 IPR002815 IPR013049 IPR036078 PF04406 PR01550 PTHR10848 PTHR10848:SF4 SSF56726	9
LotjaGi2g1v0088900_LC.5 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	DNA topoisomerase 6 subunit A; TAIR: AT5G02820.1 Spo11/DNA topoisomerase VI, subunit A protein; Swiss-Prot: sp\|A2XFC1\|TOP6A_ORYSI DNA topoisomerase 6 subunit A3; TrEMBL-Plants: tr\|A0A061R4D2\|A0A061R4D2_9CHLO DNA topoisomerase 6 subunit A; Found in the gene: LotjaGi2g1v0088900_LC	Domains G3DSA:3.40.1360.10 IPR002815 IPR036078 PR01550 PTHR10848 PTHR10848:SF4 SSF56726	7
LotjaGi5g1v0072800.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	DNA topoisomerase 6 subunit A; TAIR: AT5G02820.1 Spo11/DNA topoisomerase VI, subunit A protein; Swiss-Prot: sp\|Q9LZ03\|TOP6A_ARATH DNA topoisomerase 6 subunit A; TrEMBL-Plants: tr\|A0A068F783\|A0A068F783_LOTJA DNA topoisomerase 6 subunit A; Found in the gene: LotjaGi5g1v0072800	Domains G3DSA:1.10.10.10 G3DSA:3.40.1360.10 IPR002815 IPR004085 IPR013049 IPR034136 IPR036078 IPR036388 MF_00132 PF04406 PR01550 PR01552 PTHR10848 PTHR10848:SF4 SSF56726 cd00223 mobidb-lite	17
LotjaGi6g1v0346800.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	DNA topoisomerase 6 subunit A; TAIR: AT5G02820.1 Spo11/DNA topoisomerase VI, subunit A protein; Swiss-Prot: sp\|A2XFC1\|TOP6A_ORYSI DNA topoisomerase 6 subunit A3; TrEMBL-Plants: tr\|I1H6P7\|I1H6P7_BRADI DNA topoisomerase 6 subunit A; Found in the gene: LotjaGi6g1v0346800	Domains Coil G3DSA:1.10.10.10 G3DSA:3.40.1360.10 IPR002815 IPR004085 IPR013049 IPR034136 IPR036078 IPR036388 PF04406 PR01550 PR01552 PTHR10848 PTHR10848:SF4 SSF56726 cd00223	16

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
cd00223	CDD	1	20.00