Domain Predictions — View

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PTHR24559:SF299

Source: PANTHER

Description

No description is available for this domain.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 36

Transcript	Name	Description	Predicted domains	Domain count
LotjaGi1g1v0089900_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00850.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q99315\|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr\|A0A061F1K1\|A0A061F1K1_THECC Retrotransposon-like protein; Found in the gene: LotjaGi1g1v0089900_LC	Domains G3DSA:2.40.70.10 G3DSA:3.10.10.10 IPR021109 IPR043502 PF08284 PTHR24559 PTHR24559:SF299 SSF50630 SSF56672 cd00303 mobidb-lite	11
LotjaGi1g1v0114000_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Pol-polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P04323\|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr\|A0A151U9S6\|A0A151U9S6_CAJCA Retrovirus-related Pol polyprotein from transposon 17.6; Found in the gene: LotjaGi1g1v0114000_LC	Domains G3DSA:3.10.10.10 G3DSA:3.10.20.370 G3DSA:3.30.70.270 IPR000477 IPR041577 IPR043128 IPR043502 PF00078 PF17919 PS50878 PTHR24559 PTHR24559:SF299 SSF56672 cd01647	14
LotjaGi1g1v0153800_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q7LHG5\|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein; TrEMBL-Plants: tr\|A0A151QNT0\|A0A151QNT0_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi1g1v0153800_LC	Domains Coil G3DSA:1.10.340.70 G3DSA:2.40.70.10 G3DSA:3.10.10.10 G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR021109 IPR036397 IPR041373 IPR041588 IPR043128 IPR043502 PF00078 PF00665 PF08284 PF17917 PF17921 PS50878 PS50994 PTHR24559 PTHR24559:SF299 SSF53098 SSF56672 cd00303 cd01647 cd09274	30
LotjaGi1g1v0203500_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00850.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q99315\|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr\|A0A151QTL9\|A0A151QTL9_CAJCA Transposon Ty3-G Gag-Pol polyprotein; Found in the gene: LotjaGi1g1v0203500_LC	Domains G3DSA:2.40.70.10 G3DSA:3.10.10.10 IPR000477 IPR021109 IPR043502 PF00078 PF08284 PTHR24559 PTHR24559:SF299 SSF56672 cd01647	11
LotjaGi1g1v0207900_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; Swiss-Prot: sp\|Q99315\|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr\|A0A151R8H2\|A0A151R8H2_CAJCA Retrovirus-related Pol polyprotein from transposon 17.6; Found in the gene: LotjaGi1g1v0207900_LC	Domains G3DSA:3.10.10.10 G3DSA:3.30.70.270 IPR000477 IPR043128 IPR043502 PF00078 PTHR24559 PTHR24559:SF299 SSF56672 cd01647	10
LotjaGi1g1v0225400_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: AT1G01830.1 ARM repeat superfamily protein; Swiss-Prot: sp\|Q7LHG5\|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein; TrEMBL-Plants: tr\|A0A151TQT4\|A0A151TQT4_CAJCA Retrovirus-related Pol polyprotein from transposon 17.6; Found in the gene: LotjaGi1g1v0225400_LC	Domains G3DSA:3.10.10.10 G3DSA:3.30.70.270 IPR043128 IPR043502 PTHR24559 PTHR24559:SF299 SSF56672 cd01647	8
LotjaGi1g1v0388900_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q99315\|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr\|Q2HW87\|Q2HW87_MEDTR RNA-directed DNA polymerase (Reverse transcriptase); Zinc finger, CCHC-type; Peptidase aspartic, active site; Retrotransposon gag protein; Found in the gene: LotjaGi1g1v0388900_LC	Domains Coil G3DSA:2.40.70.10 G3DSA:3.10.10.10 G3DSA:3.30.70.270 IPR000477 IPR021109 IPR043128 IPR043502 PF00078 PF08284 PS50878 PTHR24559 PTHR24559:SF299 SSF56672 cd00303 cd01647	16
LotjaGi1g1v0401900_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Gag-pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q99315\|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr\|A0A151TQT4\|A0A151TQT4_CAJCA Retrovirus-related Pol polyprotein from transposon 17.6; Found in the gene: LotjaGi1g1v0401900_LC	Domains G3DSA:3.10.10.10 G3DSA:3.30.70.270 IPR000477 IPR043128 IPR043502 PF00078 PS50878 PTHR24559 PTHR24559:SF299 SSF56672 cd01647	11
LotjaGi2g1v0079500_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q99315\|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr\|A0A151R8H2\|A0A151R8H2_CAJCA Retrovirus-related Pol polyprotein from transposon 17.6; Found in the gene: LotjaGi2g1v0079500_LC	Domains G3DSA:3.10.10.10 G3DSA:3.30.70.270 IPR000477 IPR043128 IPR043502 PF00078 PS50878 PTHR24559 PTHR24559:SF299 SSF56672 cd01647	11
LotjaGi2g1v0089800_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: AT3G11910.1 ubiquitin-specific protease 13; Swiss-Prot: sp\|Q99315\|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr\|A0A151QNT0\|A0A151QNT0_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi2g1v0089800_LC	Domains G3DSA:3.10.10.10 G3DSA:3.30.70.270 IPR000477 IPR043128 IPR043502 PF00078 PS50878 PTHR24559 PTHR24559:SF299 SSF56672 cd01647	11
LotjaGi2g1v0106400_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q99315\|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr\|Q2HW87\|Q2HW87_MEDTR RNA-directed DNA polymerase (Reverse transcriptase); Zinc finger, CCHC-type; Peptidase aspartic, active site; Retrotransposon gag protein; Found in the gene: LotjaGi2g1v0106400_LC	Domains Coil G3DSA:2.40.70.10 G3DSA:3.10.10.10 G3DSA:3.30.70.270 G3DSA:4.10.60.10 IPR000477 IPR001878 IPR005162 IPR021109 IPR036875 IPR043128 IPR043502 NON_CYTOPLASMIC_DOMAIN PF00078 PF00098 PF03732 PF08284 PS50158 PS50878 PTHR24559 PTHR24559:SF299 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00343 SSF50630 SSF56672 SSF57756 cd00303 cd01647 mobidb-lite	32
LotjaGi2g1v0111900_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00850.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q99315\|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr\|A0A151S2S3\|A0A151S2S3_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi2g1v0111900_LC	Domains G3DSA:3.10.10.10 G3DSA:3.30.70.270 IPR000477 IPR043128 IPR043502 PF00078 PS50878 PTHR24559 PTHR24559:SF299 SSF56672 cd01647	11
LotjaGi3g1v0138700_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Polyprotein; TAIR: AT4G26180.2 Mitochondrial substrate carrier family protein; Swiss-Prot: sp\|Q6XKE6\|POLG_PVCV2 Genome polyprotein; TrEMBL-Plants: tr\|A0A151R9C8\|A0A151R9C8_CAJCA Polyprotein; Found in the gene: LotjaGi3g1v0138700_LC	Domains G3DSA:3.10.10.10 G3DSA:3.30.70.270 IPR043128 IPR043502 PTHR24559 PTHR24559:SF299 SSF56672	7
LotjaGi3g1v0258400_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q7LHG5\|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein; TrEMBL-Plants: tr\|A0A151QNT0\|A0A151QNT0_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi3g1v0258400_LC	Domains Coil G3DSA:1.10.340.70 G3DSA:3.10.10.10 G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR036397 IPR041373 IPR041588 IPR043128 IPR043502 PF00078 PF00665 PF17917 PF17921 PS50878 PS50994 PTHR24559 PTHR24559:SF299 SSF53098 SSF56672 cd01647 cd09274	26
LotjaGi3g1v0306700_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q7LHG5\|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein; TrEMBL-Plants: tr\|A0A151S2S3\|A0A151S2S3_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi3g1v0306700_LC	Domains G3DSA:2.40.70.10 G3DSA:3.10.10.10 G3DSA:3.10.20.370 G3DSA:3.30.70.270 G3DSA:4.10.60.10 IPR000477 IPR001878 IPR001969 IPR005162 IPR021109 IPR036875 IPR041373 IPR043128 IPR043502 PF00078 PF00098 PF03732 PF08284 PF17917 PS00141 PS50158 PS50878 PTHR24559 PTHR24559:SF299 SM00343 SSF50630 SSF56672 SSF57756 cd00303 cd01647 cd09274 mobidb-lite	32
LotjaGi3g1v0391900_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P20825\|POL2_DROME Retrovirus-related Pol polyprotein from transposon 297; TrEMBL-Plants: tr\|A0A151S2S3\|A0A151S2S3_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi3g1v0391900_LC	Domains G3DSA:3.10.20.370 G3DSA:3.30.70.270 IPR000477 IPR041577 IPR043128 IPR043502 PF00078 PF17919 PS50878 PTHR24559 PTHR24559:SF299 SSF56672 cd01647	13
LotjaGi4g1v0044600_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00850.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q99315\|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr\|A0A151SXQ5\|A0A151SXQ5_CAJCA Retrotransposable element Tf2; Found in the gene: LotjaGi4g1v0044600_LC	Domains G3DSA:3.10.10.10 G3DSA:3.30.70.270 IPR043128 IPR043502 PTHR24559 PTHR24559:SF299 SSF56672 cd01647	8
LotjaGi4g1v0156200_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Reverse transcriptase; TAIR: AT4G37310.1 cytochrome P450, family 81, subfamily H, polypeptide 1; Swiss-Prot: sp\|Q7LHG5\|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein; TrEMBL-Plants: tr\|A0A061EEG7\|A0A061EEG7_THECC DNA/RNA polymerases superfamily protein; Found in the gene: LotjaGi4g1v0156200_LC	Domains G3DSA:3.10.10.10 G3DSA:3.30.70.270 IPR000477 IPR043128 IPR043502 PF00078 PTHR24559 PTHR24559:SF299 SSF56672 cd01647	10
LotjaGi4g1v0167800_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00850.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q99315\|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr\|A0A151QNT0\|A0A151QNT0_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi4g1v0167800_LC	Domains G3DSA:3.10.10.10 G3DSA:3.30.70.270 IPR000477 IPR043128 IPR043502 PF00078 PS50878 PTHR24559 PTHR24559:SF299 SSF56672 cd01647	11
LotjaGi4g1v0171300_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q7LHG5\|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein; TrEMBL-Plants: tr\|A0A151QNT0\|A0A151QNT0_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi4g1v0171300_LC	Domains Coil G3DSA:1.10.340.70 G3DSA:2.40.70.10 G3DSA:3.10.10.10 G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 IPR000477 IPR001584 IPR012337 IPR021109 IPR036397 IPR041373 IPR041588 IPR043128 IPR043502 PF00078 PF00665 PF08284 PF17917 PF17921 PS50878 PS50994 PTHR24559 PTHR24559:SF299 SSF53098 SSF56672 cd00303 cd01647 cd09274	30
LotjaGi4g1v0175300_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00850.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q99315\|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr\|A0A151QTL9\|A0A151QTL9_CAJCA Transposon Ty3-G Gag-Pol polyprotein; Found in the gene: LotjaGi4g1v0175300_LC	Domains G3DSA:3.10.10.10 G3DSA:3.30.70.270 IPR000477 IPR043128 IPR043502 PF00078 PTHR24559 PTHR24559:SF299 SSF56672 cd01647	10
LotjaGi5g1v0082100_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00850.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q99315\|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr\|A0A151QWS7\|A0A151QWS7_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi5g1v0082100_LC	Domains G3DSA:3.10.10.10 G3DSA:3.30.70.270 IPR000477 IPR043128 IPR043502 PF00078 PTHR24559 PTHR24559:SF299 SSF56672 cd01647	10
LotjaGi5g1v0096400_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Gag-pol polyprotein; TAIR: AT3G48340.1 Cysteine proteinases superfamily protein; Swiss-Prot: sp\|Q99315\|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr\|A0A151TNR6\|A0A151TNR6_CAJCA Transposon Ty3-G Gag-Pol polyprotein; Found in the gene: LotjaGi5g1v0096400_LC	Domains G3DSA:3.10.10.10 G3DSA:3.30.70.270 IPR000477 IPR043128 IPR043502 PF00078 PTHR24559 PTHR24559:SF299 SSF56672 cd01647 mobidb-lite	11
LotjaGi5g1v0139100_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-G Gag-Pol polyprotein; TAIR: AT3G01420.1 Peroxidase superfamily protein; Swiss-Prot: sp\|Q99315\|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr\|A0A151QLZ0\|A0A151QLZ0_CAJCA Retrovirus-related Pol polyprotein from transposon 17.6; Found in the gene: LotjaGi5g1v0139100_LC	Domains G3DSA:3.10.10.10 IPR043502 PTHR24559 PTHR24559:SF299 SSF56672	5
LotjaGi5g1v0160800_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00850.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q99315\|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr\|Q6F2D6\|Q6F2D6_SOLDE Putative polyprotein, identical; Found in the gene: LotjaGi5g1v0160800_LC	Domains G3DSA:3.10.10.10 G3DSA:3.30.70.270 IPR043128 IPR043502 PTHR24559 PTHR24559:SF299 SSF56672 cd01647	8
LotjaGi5g1v0172000_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00850.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P20825\|POL2_DROME Retrovirus-related Pol polyprotein from transposon 297; TrEMBL-Plants: tr\|A0A061G943\|A0A061G943_THECC Uncharacterized protein; Found in the gene: LotjaGi5g1v0172000_LC	Domains G3DSA:3.10.10.10 G3DSA:3.30.70.270 IPR000477 IPR043128 IPR043502 PF00078 PS50878 PTHR24559 PTHR24559:SF299 SSF56672 cd01647	11
LotjaGi5g1v0323200_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: AT3G17340.1 ARM repeat superfamily protein; Swiss-Prot: sp\|Q99315\|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr\|A0A151QYW7\|A0A151QYW7_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi5g1v0323200_LC	Domains G3DSA:3.10.10.10 IPR000477 IPR043502 PF00078 PTHR24559 PTHR24559:SF299 SSF56672 cd01647	8
LotjaGi6g1v0125000_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: AT1G75560.1 zinc knuckle (CCHC-type) family protein; Swiss-Prot: sp\|Q99315\|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr\|A0A151RHT9\|A0A151RHT9_CAJCA Retrotransposable element Tf2; Found in the gene: LotjaGi6g1v0125000_LC	Domains Coil G3DSA:2.40.70.10 G3DSA:3.10.10.10 G3DSA:4.10.60.10 IPR000477 IPR001878 IPR005162 IPR021109 IPR036875 IPR043502 PF00078 PF00098 PF03732 PF08284 PS50158 PTHR24559 PTHR24559:SF299 SM00343 SSF50630 SSF56672 SSF57756 cd00303 cd01647 mobidb-lite	24
LotjaGi6g1v0146500_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: AT5G52850.1 Pentatricopeptide repeat (PPR) superfamily protein; Swiss-Prot: sp\|Q7LHG5\|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein; TrEMBL-Plants: tr\|A0A151TQT4\|A0A151TQT4_CAJCA Retrovirus-related Pol polyprotein from transposon 17.6; Found in the gene: LotjaGi6g1v0146500_LC	Domains G3DSA:3.10.10.10 G3DSA:3.30.70.270 IPR043128 IPR043502 PTHR24559 PTHR24559:SF299 SSF56672 cd01647	8
LotjaGi6g1v0151800_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Transposon Ty3-I Gag-Pol polyprotein; TAIR: AT1G74010.1 Calcium-dependent phosphotriesterase superfamily protein; Swiss-Prot: sp\|Q7LHG5\|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein; TrEMBL-Plants: tr\|A0A151SC20\|A0A151SC20_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi6g1v0151800_LC	Domains G3DSA:3.10.10.10 IPR043502 PTHR24559 PTHR24559:SF299 SSF56672 cd03788	6
LotjaGi6g1v0214100_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P20825\|POL2_DROME Retrovirus-related Pol polyprotein from transposon 297; TrEMBL-Plants: tr\|A0A151TQZ3\|A0A151TQZ3_CAJCA Transposon Ty3-G Gag-Pol polyprotein; Found in the gene: LotjaGi6g1v0214100_LC	Domains Coil G3DSA:2.40.70.10 G3DSA:3.10.10.10 G3DSA:3.30.70.270 G3DSA:4.10.60.10 IPR000477 IPR001878 IPR001969 IPR005162 IPR021109 IPR036875 IPR043128 IPR043502 PF00078 PF00098 PF03732 PF08284 PS00141 PS50158 PS50878 PTHR24559 PTHR24559:SF299 SM00343 SSF50630 SSF56672 SSF57756 cd00303 cd01647 cd06503 mobidb-lite	30
LotjaGi6g1v0214100_LC.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|P20825\|POL2_DROME Retrovirus-related Pol polyprotein from transposon 297; TrEMBL-Plants: tr\|A0A151TQZ3\|A0A151TQZ3_CAJCA Transposon Ty3-G Gag-Pol polyprotein; Found in the gene: LotjaGi6g1v0214100_LC	Domains Coil G3DSA:2.40.70.10 G3DSA:3.10.10.10 G3DSA:3.30.70.270 G3DSA:4.10.60.10 IPR000477 IPR001878 IPR001969 IPR005162 IPR021109 IPR036875 IPR043128 IPR043502 PF00078 PF00098 PF03732 PF08284 PS00141 PS50158 PS50878 PTHR24559 PTHR24559:SF299 SM00343 SSF50630 SSF56672 SSF57756 cd00303 cd01647 cd06503 mobidb-lite	30
LotjaGi6g1v0218100_LC.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q99315\|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr\|A0A061FHZ8\|A0A061FHZ8_THECC DNA/RNA polymerases superfamily protein; Found in the gene: LotjaGi6g1v0218100_LC	Domains Coil G3DSA:1.10.340.70 G3DSA:2.40.70.10 G3DSA:3.10.10.10 G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 G3DSA:4.10.60.10 IPR000477 IPR001584 IPR001878 IPR005162 IPR012337 IPR016197 IPR021109 IPR036397 IPR041373 IPR041588 IPR043128 IPR043502 PF00078 PF00098 PF00665 PF03732 PF08284 PF17917 PF17921 PS50158 PS50878 PS50994 PTHR24559 PTHR24559:SF299 SM00343 SSF50630 SSF53098 SSF54160 SSF56672 cd00303 cd01647 cd09274 cd18638 mobidb-lite	42
LotjaGi6g1v0218100_LC.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q99315\|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr\|A0A061FHZ8\|A0A061FHZ8_THECC DNA/RNA polymerases superfamily protein; Found in the gene: LotjaGi6g1v0218100_LC	Domains Coil G3DSA:1.10.340.70 G3DSA:2.40.70.10 G3DSA:3.10.10.10 G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 G3DSA:4.10.60.10 IPR000477 IPR001584 IPR001878 IPR005162 IPR012337 IPR016197 IPR021109 IPR036397 IPR041373 IPR041588 IPR043128 IPR043502 PF00078 PF00098 PF00665 PF03732 PF08284 PF17917 PF17921 PS50158 PS50878 PS50994 PTHR24559 PTHR24559:SF299 SM00343 SSF50630 SSF53098 SSF54160 SSF56672 cd00303 cd01647 cd09274 cd18638 mobidb-lite	42
LotjaGi6g1v0218100_LC.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q99315\|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr\|A0A061FHZ8\|A0A061FHZ8_THECC DNA/RNA polymerases superfamily protein; Found in the gene: LotjaGi6g1v0218100_LC	Domains Coil G3DSA:1.10.340.70 G3DSA:2.40.70.10 G3DSA:3.10.10.10 G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 G3DSA:4.10.60.10 IPR000477 IPR001584 IPR001878 IPR005162 IPR012337 IPR016197 IPR021109 IPR036397 IPR041373 IPR041588 IPR043128 IPR043502 PF00078 PF00098 PF00665 PF03732 PF08284 PF17917 PF17921 PS50158 PS50878 PS50994 PTHR24559 PTHR24559:SF299 SM00343 SSF50630 SSF53098 SSF54160 SSF56672 cd00303 cd01647 cd09274 cd18638 mobidb-lite	42
LotjaGi6g1v0218100_LC.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp\|Q99315\|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr\|A0A061FHZ8\|A0A061FHZ8_THECC DNA/RNA polymerases superfamily protein; Found in the gene: LotjaGi6g1v0218100_LC	Domains Coil G3DSA:1.10.340.70 G3DSA:2.40.70.10 G3DSA:3.10.10.10 G3DSA:3.10.20.370 G3DSA:3.30.420.10 G3DSA:3.30.70.270 G3DSA:4.10.60.10 IPR000477 IPR001584 IPR001878 IPR005162 IPR012337 IPR016197 IPR021109 IPR036397 IPR041373 IPR041588 IPR043128 IPR043502 PF00078 PF00098 PF00665 PF03732 PF08284 PF17917 PF17921 PS50158 PS50878 PS50994 PTHR24559 PTHR24559:SF299 SM00343 SSF50630 SSF53098 SSF54160 SSF56672 cd00303 cd01647 cd09274 cd18638 mobidb-lite	42

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	2.78