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SSF101224

Source: SUPERFAMILY

Description

No description is available for this domain.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0031491
Molecular function Nucleosome binding Interacting selectively and non-covalently with a nucleosome, a complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures.
Subterm of
GO:0043044
Biological process ATP-dependent chromatin remodeling Dynamic structural changes to eukaryotic chromatin that require energy from the hydrolysis of ATP, ranging from local changes necessary for transcriptional regulation to global changes necessary for chromosome segregation, mediated by ATP-dependent chromatin-remodelling factors.
Subterm of

Associated Lotus transcripts 9

Transcript Name Description Predicted domains Domain count
Lj4g3v2371620.1
– Chromatin remodeling complex subunit [Medicago truncatula] gi|357447407|ref|XP_003593979.1|
Domains
32
Lj4g3v2371620.2
– Chromatin remodeling complex subunit [Medicago truncatula] gi|357447407|ref|XP_003593979.1|
Domains
15
Lj6g3v1919360.1
– Chromatin remodeling complex subunit [Medicago truncatula] gi|357447407|ref|XP_003593979.1|
Domains
34
LotjaGi4g1v0345700.1
– DNA/RNA helicase protein; TAIR: AT5G18620.2 chromatin remodeling factor17; Swiss-Prot: sp|F4JY24|CHR17_ARATH ISWI chromatin-remodeling complex ATPase CHR17; TrEMBL-Plants: tr|A0A1J7I094|A0A1J7I094_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0345700
Domains
37
LotjaGi4g1v0345700.2
– DNA/RNA helicase protein; TAIR: AT5G18620.2 chromatin remodeling factor17; Swiss-Prot: sp|F4JY24|CHR17_ARATH ISWI chromatin-remodeling complex ATPase CHR17; TrEMBL-Plants: tr|I1KN24|I1KN24_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0345700
Domains
35
LotjaGi4g1v0345700.3
– DNA/RNA helicase protein; TAIR: AT5G18620.2 chromatin remodeling factor17; Swiss-Prot: sp|F4JY24|CHR17_ARATH ISWI chromatin-remodeling complex ATPase CHR17; TrEMBL-Plants: tr|A0A1J7I094|A0A1J7I094_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0345700
Domains
35
LotjaGi4g1v0345700.4
– DNA/RNA helicase protein; TAIR: AT5G18620.2 chromatin remodeling factor17; Swiss-Prot: sp|F4JY24|CHR17_ARATH ISWI chromatin-remodeling complex ATPase CHR17; TrEMBL-Plants: tr|A0A1J7I094|A0A1J7I094_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0345700
Domains
35
LotjaGi6g1v0306600.1
– DNA/RNA helicase protein; TAIR: AT3G06400.2 chromatin-remodeling protein 11; Swiss-Prot: sp|Q8RWY3|ISW2_ARATH ISWI chromatin-remodeling complex ATPase CHR11; TrEMBL-Plants: tr|I1M1D0|I1M1D0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0306600
Domains
37
LotjaGi6g1v0306600.2
– DNA/RNA helicase protein; TAIR: AT3G06400.2 chromatin-remodeling protein 11; Swiss-Prot: sp|Q8RWY3|ISW2_ARATH ISWI chromatin-remodeling complex ATPase CHR11; TrEMBL-Plants: tr|A0A0B2RF13|A0A0B2RF13_GLYSO Putative chromatin-remodeling complex ATPase chain; Found in the gene: LotjaGi6g1v0306600
Domains
37

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 11.11