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SSF82704

Source: SUPERFAMILY

Description

No description is available for this domain.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003676
Molecular function Nucleic acid binding Interacting selectively and non-covalently with any nucleic acid.
Subterm of

Associated Lotus transcripts 27

Transcript Name Description Predicted domains Domain count
Lj0g3v0262739.1
– Alba DNA/RNA-binding protein [Theobroma cacao] gi|508783774|gb|EOY31030.1|
Domains
8
Lj1g3v0116480.1
– Alba DNA/RNA-binding protein [Theobroma cacao] gi|508719138|gb|EOY11035.1|
Domains
8
Lj1g3v1233770.1
– Ribonuclease P protein subunit p25 [Medicago truncatula] gi|357464479|ref|XP_003602521.1|
Domains
7
Lj1g3v3465990.1
– PREDICTED: glycine-rich cell wall structural protein 1.8-like [Cicer arietinum] gi|502103627|ref|XP_004492328.1|
Domains
8
Lj1g3v3465990.2
– PREDICTED: glycine-rich cell wall structural protein 1.8-like [Cicer arietinum] gi|502103627|ref|XP_004492328.1|
Domains
8
Lj1g3v3465990.3
– PREDICTED: glycine-rich cell wall structural protein 1.8-like [Cicer arietinum] gi|502103627|ref|XP_004492328.1|
Domains
7
Lj1g3v3477170.1
– PREDICTED: glycine-rich cell wall structural protein 1.8-like [Cicer arietinum] gi|502103627|ref|XP_004492328.1|
Domains
8
Lj3g3v2211460.1
– Alba DNA/RNA-binding protein [Theobroma cacao] gi|508783774|gb|EOY31030.1|
Domains
8
Lj5g3v0255530.1
– Alba DNA/RNA-binding protein [Theobroma cacao] gi|508723214|gb|EOY15111.1|
Domains
8
LotjaGi1g1v0314600.1
– Alba DNA/RNA-binding protein; TAIR: AT1G76010.1 Alba DNA/RNA-binding protein; Swiss-Prot: sp|Q99JH1|RP25L_MOUSE Ribonuclease P protein subunit p25-like protein; TrEMBL-Plants: tr|A0A067KSQ6|A0A067KSQ6_JATCU Uncharacterized protein; Found in the gene: LotjaGi1g1v0314600
Domains
8
LotjaGi1g1v0314600.2
– Alba DNA/RNA-binding protein; TAIR: AT1G76010.1 Alba DNA/RNA-binding protein; Swiss-Prot: sp|Q9BUL9|RPP25_HUMAN Ribonuclease P protein subunit p25; TrEMBL-Plants: tr|G7JAE0|G7JAE0_MEDTR Rpp20 subunit of nuclear RNase MRP and P protein; Found in the gene: LotjaGi1g1v0314600
Domains
7
LotjaGi1g1v0584900_LC.1
– Alba DNA/RNA-binding protein; TAIR: AT3G07030.2 Alba DNA/RNA-binding protein; Swiss-Prot: sp|Q8N5L8|RP25L_HUMAN Ribonuclease P protein subunit p25-like protein; TrEMBL-Plants: tr|A0A0S3RUV1|A0A0S3RUV1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0584900_LC
Domains
8
LotjaGi1g1v0584900_LC.11
– Alba DNA/RNA-binding protein; TAIR: AT3G07030.2 Alba DNA/RNA-binding protein; Swiss-Prot: sp|Q8N5L8|RP25L_HUMAN Ribonuclease P protein subunit p25-like protein; TrEMBL-Plants: tr|A0A0S3RUV1|A0A0S3RUV1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0584900_LC
Domains
8
LotjaGi1g1v0584900_LC.12
– Alba DNA/RNA-binding protein; TAIR: AT3G07030.2 Alba DNA/RNA-binding protein; Swiss-Prot: sp|Q8N5L8|RP25L_HUMAN Ribonuclease P protein subunit p25-like protein; TrEMBL-Plants: tr|A0A0S3RUV1|A0A0S3RUV1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0584900_LC
Domains
8
LotjaGi1g1v0584900_LC.15
– Alba DNA/RNA-binding protein; TAIR: AT3G07030.2 Alba DNA/RNA-binding protein; Swiss-Prot: sp|Q8N5L8|RP25L_HUMAN Ribonuclease P protein subunit p25-like protein; TrEMBL-Plants: tr|A0A151RF74|A0A151RF74_CAJCA Alba-like protein C9orf23; Found in the gene: LotjaGi1g1v0584900_LC
Domains
8
LotjaGi1g1v0584900_LC.2
– Alba DNA/RNA-binding protein; TAIR: AT3G07030.2 Alba DNA/RNA-binding protein; Swiss-Prot: sp|Q8N5L8|RP25L_HUMAN Ribonuclease P protein subunit p25-like protein; TrEMBL-Plants: tr|A0A0S3RUV1|A0A0S3RUV1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0584900_LC
Domains
8
LotjaGi1g1v0584900_LC.3
– Alba DNA/RNA-binding protein; TAIR: AT3G07030.2 Alba DNA/RNA-binding protein; Swiss-Prot: sp|Q8N5L8|RP25L_HUMAN Ribonuclease P protein subunit p25-like protein; TrEMBL-Plants: tr|A0A0S3RUV1|A0A0S3RUV1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0584900_LC
Domains
8
LotjaGi1g1v0584900_LC.7
– Alba DNA/RNA-binding protein; TAIR: AT3G07030.4 Alba DNA/RNA-binding protein; Swiss-Prot: sp|Q8N5L8|RP25L_HUMAN Ribonuclease P protein subunit p25-like protein; TrEMBL-Plants: tr|A0A0S3RUV1|A0A0S3RUV1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0584900_LC
Domains
8
LotjaGi1g1v0584900_LC.9
– Alba DNA/RNA-binding protein; TAIR: AT3G07030.5 Alba DNA/RNA-binding protein; Swiss-Prot: sp|Q8N5L8|RP25L_HUMAN Ribonuclease P protein subunit p25-like protein; TrEMBL-Plants: tr|A0A0S3RUV1|A0A0S3RUV1_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0584900_LC
Domains
8
LotjaGi2g1v0452300.1
– Alba DNA/RNA-binding protein; TAIR: AT3G04620.1 Alba DNA/RNA-binding protein; Swiss-Prot: sp|O22969|Y2416_ARATH Uncharacterized protein At2g34160; TrEMBL-Plants: tr|A0A151SD76|A0A151SD76_CAJCA Uncharacterized protein family; Found in the gene: LotjaGi2g1v0452300
Domains
9
LotjaGi3g1v0010700.1
– Alba DNA/RNA-binding protein; TAIR: AT2G34160.1 Alba DNA/RNA-binding protein; Swiss-Prot: sp|O22969|Y2416_ARATH Uncharacterized protein At2g34160; TrEMBL-Plants: tr|I3SKS5|I3SKS5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0010700
Domains
9
LotjaGi3g1v0162700.1
– Alba DNA/RNA-binding protein; TAIR: AT3G04620.1 Alba DNA/RNA-binding protein; Swiss-Prot: sp|O22969|Y2416_ARATH Uncharacterized protein At2g34160; TrEMBL-Plants: tr|A0A151SD76|A0A151SD76_CAJCA Uncharacterized protein family; Found in the gene: LotjaGi3g1v0162700
Domains
6
LotjaGi3g1v0162700.2
– Alba DNA/RNA-binding protein; TAIR: AT3G04620.1 Alba DNA/RNA-binding protein; Swiss-Prot: sp|O22969|Y2416_ARATH Uncharacterized protein At2g34160; TrEMBL-Plants: tr|A0A151SD76|A0A151SD76_CAJCA Uncharacterized protein family; Found in the gene: LotjaGi3g1v0162700
Domains
6
LotjaGi3g1v0358000.1
– Alba DNA/RNA-binding protein; TAIR: AT2G34160.1 Alba DNA/RNA-binding protein; Swiss-Prot: sp|O22969|Y2416_ARATH Uncharacterized protein At2g34160; TrEMBL-Plants: tr|I3S5V4|I3S5V4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0358000
Domains
9
LotjaGi5g1v0003300.1
– DNA/RNA-binding protein Alba-like protein; TAIR: AT1G76010.1 Alba DNA/RNA-binding protein; Swiss-Prot: sp|Q8N5L8|RP25L_HUMAN Ribonuclease P protein subunit p25-like protein; TrEMBL-Plants: tr|C6TE19|C6TE19_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi5g1v0003300
Domains
7
LotjaGi5g1v0003300.2
– Alba DNA/RNA-binding protein; TAIR: AT1G76010.1 Alba DNA/RNA-binding protein; Swiss-Prot: sp|Q8N5L8|RP25L_HUMAN Ribonuclease P protein subunit p25-like protein; TrEMBL-Plants: tr|I3SGM4|I3SGM4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0003300
Domains
8
LotjaGi5g1v0211400.1
– Alba DNA/RNA-binding protein; TAIR: AT3G04620.1 Alba DNA/RNA-binding protein; Swiss-Prot: sp|O22969|Y2416_ARATH Uncharacterized protein At2g34160; TrEMBL-Plants: tr|I3SVY5|I3SVY5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0211400
Domains
9

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
SSF82704 SUPERFAMILY 1 3.70