Domain Predictions — View

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cd01434

Source: CDD

Description

EFG_mtEFG1_IV

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on April 27, 2020, while the GO metadata was last updated on April 27, 2020.

GO term	Namespace	Name	Definition	Relationships
GO:0005525 View details of GO:0005525 AmiGO InterPro QuickGO	Molecular function	GTP binding	Interacting selectively and non-covalently with GTP, guanosine triphosphate.	Subterm of GO:0032550 GO:0032561 GO:0035639

Associated Lotus transcripts 10

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0270919.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: elongation factor G, chloroplastic-like [Glycine max] gi\|356563292\|ref\|XP_003549898.1\|	Domains G3DSA:2.40.30.10 G3DSA:3.30.230.10 G3DSA:3.30.70.240 G3DSA:3.30.70.870 G3DSA:3.40.50.300 IPR000640 IPR000795 IPR004161 IPR004540 IPR005225 IPR005517 IPR009000 IPR009022 IPR014721 IPR020568 IPR027417 IPR030848 IPR031157 MF_00054_B MF_03063 PF00009 PF00679 PF03144 PF03764 PF14492 PR00315 PS00301 PS51722 PTHR23115 PTHR23115:SF66 SM00838 SM00889 SSF50447 SSF52540 SSF54211 SSF54980 TIGR00231 TIGR00484 cd01434 cd01886 cd03713 cd04088 mobidb-lite	43
LotjaGi1g1v0600400.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Elongation factor G; TAIR: AT2G45030.1 Translation elongation factor EFG/EF2 protein; Swiss-Prot: sp\|F4IW10\|EFGM2_ARATH Elongation factor G-2, mitochondrial; TrEMBL-Plants: tr\|A0A0S3RVP1\|A0A0S3RVP1_PHAAN Elongation factor G, mitochondrial; Found in the gene: LotjaGi1g1v0600400	Domains Coil G3DSA:2.40.30.10 G3DSA:3.30.230.10 G3DSA:3.30.70.240 G3DSA:3.30.70.870 G3DSA:3.40.50.300 IPR000640 IPR000795 IPR004161 IPR004540 IPR005225 IPR005517 IPR009000 IPR009022 IPR014721 IPR020568 IPR027417 IPR031157 IPR035647 IPR035649 IPR041095 MF_00054_B NON_CYTOPLASMIC_DOMAIN PF00009 PF00679 PF03144 PF03764 PF14492 PR00315 PS00301 PS51722 PTHR43636 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00838 SM00889 SSF50447 SSF52540 SSF54211 SSF54980 SignalP-TM SignalP-noTM TIGR00231 TIGR00484 cd01434 cd01886 cd04091 cd04097 cd16262	51
LotjaGi1g1v0600400.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Elongation factor G; TAIR: AT2G45030.1 Translation elongation factor EFG/EF2 protein; Swiss-Prot: sp\|F4IW10\|EFGM2_ARATH Elongation factor G-2, mitochondrial; TrEMBL-Plants: tr\|A0A0S3RVP1\|A0A0S3RVP1_PHAAN Elongation factor G, mitochondrial; Found in the gene: LotjaGi1g1v0600400	Domains G3DSA:2.40.30.10 G3DSA:3.30.230.10 G3DSA:3.30.70.240 G3DSA:3.30.70.870 G3DSA:3.40.50.300 IPR000640 IPR000795 IPR004161 IPR004540 IPR005225 IPR005517 IPR009000 IPR014721 IPR020568 IPR027417 IPR031157 IPR035647 IPR035649 IPR041095 MF_00054_B NON_CYTOPLASMIC_DOMAIN PF00009 PF00679 PF03144 PF03764 PF14492 PR00315 PS00301 PS51722 PTHR43636 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00838 SM00889 SSF50447 SSF52540 SSF54211 SSF54980 SignalP-TM SignalP-noTM TIGR00231 cd01434 cd01886 cd04091 cd04097	47
LotjaGi1g1v0600400.5 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Elongation factor G; TAIR: AT2G45030.1 Translation elongation factor EFG/EF2 protein; Swiss-Prot: sp\|F4IW10\|EFGM2_ARATH Elongation factor G-2, mitochondrial; TrEMBL-Plants: tr\|A0A0S3RVP1\|A0A0S3RVP1_PHAAN Elongation factor G, mitochondrial; Found in the gene: LotjaGi1g1v0600400	Domains G3DSA:2.40.30.10 G3DSA:3.30.230.10 G3DSA:3.30.70.240 G3DSA:3.30.70.870 G3DSA:3.40.50.300 IPR000640 IPR000795 IPR004161 IPR004540 IPR005225 IPR005517 IPR009000 IPR009022 IPR014721 IPR020568 IPR027417 IPR031157 IPR035647 IPR035649 IPR041095 MF_00054_B NON_CYTOPLASMIC_DOMAIN PF00009 PF00679 PF03144 PF03764 PF14492 PR00315 PS00301 PS51722 PTHR43636 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00838 SM00889 SSF50447 SSF52540 SSF54211 SSF54980 SignalP-TM SignalP-noTM TIGR00231 cd01434 cd01886 cd04091 cd04097 cd16262	49
LotjaGi1g1v0600400.6 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Elongation factor G; TAIR: AT2G45030.1 Translation elongation factor EFG/EF2 protein; Swiss-Prot: sp\|F4IW10\|EFGM2_ARATH Elongation factor G-2, mitochondrial; TrEMBL-Plants: tr\|A0A0S3RVP1\|A0A0S3RVP1_PHAAN Elongation factor G, mitochondrial; Found in the gene: LotjaGi1g1v0600400	Domains Coil G3DSA:2.40.30.10 G3DSA:3.30.230.10 G3DSA:3.30.70.240 G3DSA:3.30.70.870 G3DSA:3.40.50.300 IPR000640 IPR000795 IPR004161 IPR004540 IPR005225 IPR005517 IPR009000 IPR009022 IPR014721 IPR020568 IPR027417 IPR031157 IPR035647 IPR035649 IPR041095 MF_00054_B NON_CYTOPLASMIC_DOMAIN PF00009 PF00679 PF03144 PF03764 PF14492 PR00315 PS00301 PS51722 PTHR43636 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00838 SM00889 SSF50447 SSF52540 SSF54211 SSF54980 SignalP-TM SignalP-noTM TIGR00231 TIGR00484 cd01434 cd01886 cd04091 cd04097 cd16262	51
LotjaGi1g1v0600400.7 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Elongation factor G; TAIR: AT2G45030.1 Translation elongation factor EFG/EF2 protein; Swiss-Prot: sp\|F4IW10\|EFGM2_ARATH Elongation factor G-2, mitochondrial; TrEMBL-Plants: tr\|V7B4Z6\|V7B4Z6_PHAVU Elongation factor G, mitochondrial; Found in the gene: LotjaGi1g1v0600400	Domains G3DSA:2.40.30.10 G3DSA:3.30.230.10 G3DSA:3.30.70.240 G3DSA:3.30.70.870 G3DSA:3.40.50.300 IPR000795 IPR004161 IPR004540 IPR005225 IPR005517 IPR009000 IPR009022 IPR014721 IPR020568 IPR027417 IPR031157 IPR035647 IPR041095 MF_00054_B NON_CYTOPLASMIC_DOMAIN PF00009 PF03144 PF03764 PF14492 PR00315 PS00301 PS51722 PTHR43636 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00889 SSF50447 SSF52540 SSF54211 SSF54980 SignalP-TM SignalP-noTM TIGR00231 TIGR00484 cd01434 cd01886 cd04091 cd16262	45
LotjaGi4g1v0209900.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Elongation factor G; TAIR: AT1G62750.1 Translation elongation factor EFG/EF2 protein; Swiss-Prot: sp\|P34811\|EFGC1_SOYBN Elongation factor G-1, chloroplastic; TrEMBL-Plants: tr\|A0A151SKP1\|A0A151SKP1_CAJCA Elongation factor G, chloroplastic; Found in the gene: LotjaGi4g1v0209900	Domains G3DSA:2.40.30.10 G3DSA:3.30.230.10 G3DSA:3.30.70.240 G3DSA:3.30.70.870 G3DSA:3.40.50.300 IPR000640 IPR000795 IPR004161 IPR004540 IPR005225 IPR005517 IPR009000 IPR009022 IPR014721 IPR020568 IPR027417 IPR030848 IPR031157 IPR035647 IPR035649 IPR041095 MF_00054_B MF_03063 PF00009 PF00679 PF03144 PF03764 PF14492 PR00315 PS00301 PS51722 PTHR43261 SM00838 SM00889 SSF50447 SSF52540 SSF54211 SSF54980 TIGR00231 TIGR00484 cd01434 cd01886 cd03713 cd04088 cd16262 mobidb-lite	46
LotjaGi4g1v0209900.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Elongation factor G; TAIR: AT1G62750.1 Translation elongation factor EFG/EF2 protein; Swiss-Prot: sp\|P34811\|EFGC1_SOYBN Elongation factor G-1, chloroplastic; TrEMBL-Plants: tr\|A0A0R0FND6\|A0A0R0FND6_SOYBN Elongation factor G, chloroplastic; Found in the gene: LotjaGi4g1v0209900	Domains G3DSA:2.40.30.10 G3DSA:3.30.230.10 G3DSA:3.30.70.240 G3DSA:3.30.70.870 G3DSA:3.40.50.300 IPR000640 IPR000795 IPR004161 IPR004540 IPR005225 IPR005517 IPR009000 IPR009022 IPR014721 IPR020568 IPR027417 IPR030848 IPR031157 IPR035647 IPR035649 IPR041095 MF_00054_B MF_03063 PF00009 PF00679 PF03144 PF03764 PF14492 PR00315 PS00301 PS51722 PTHR43261 SM00838 SM00889 SSF50447 SSF52540 SSF54211 SSF54980 TIGR00231 TIGR00484 cd01434 cd01886 cd03713 cd04088 cd16262 mobidb-lite	46
LotjaGi4g1v0209900.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Elongation factor G; TAIR: AT1G62750.1 Translation elongation factor EFG/EF2 protein; Swiss-Prot: sp\|P34811\|EFGC1_SOYBN Elongation factor G-1, chloroplastic; TrEMBL-Plants: tr\|A0A0R0FND6\|A0A0R0FND6_SOYBN Elongation factor G, chloroplastic; Found in the gene: LotjaGi4g1v0209900	Domains G3DSA:2.40.30.10 G3DSA:3.30.230.10 G3DSA:3.30.70.240 G3DSA:3.30.70.870 G3DSA:3.40.50.300 IPR000640 IPR000795 IPR004161 IPR004540 IPR005225 IPR005517 IPR009000 IPR009022 IPR014721 IPR020568 IPR027417 IPR030848 IPR031157 IPR035647 IPR035649 IPR041095 MF_00054_B MF_03063 PF00009 PF00679 PF03144 PF03764 PF14492 PR00315 PS00301 PS51722 PTHR43261 SM00838 SM00889 SSF50447 SSF52540 SSF54211 SSF54980 TIGR00231 TIGR00484 cd01434 cd01886 cd03713 cd04088 cd16262 mobidb-lite	46
LotjaGi4g1v0209900.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Elongation factor G; TAIR: AT1G62750.1 Translation elongation factor EFG/EF2 protein; Swiss-Prot: sp\|P34811\|EFGC1_SOYBN Elongation factor G-1, chloroplastic; TrEMBL-Plants: tr\|A0A0R0FND6\|A0A0R0FND6_SOYBN Elongation factor G, chloroplastic; Found in the gene: LotjaGi4g1v0209900	Domains G3DSA:2.40.30.10 G3DSA:3.30.230.10 G3DSA:3.30.70.240 G3DSA:3.30.70.870 G3DSA:3.40.50.300 IPR000640 IPR000795 IPR004161 IPR004540 IPR005225 IPR005517 IPR009000 IPR009022 IPR014721 IPR020568 IPR027417 IPR030848 IPR031157 IPR035647 IPR035649 IPR041095 MF_00054_B MF_03063 PF00009 PF00679 PF03144 PF03764 PF14492 PR00315 PS00301 PS51722 PTHR43261 SM00838 SM00889 SSF50447 SSF52540 SSF54211 SSF54980 TIGR00231 TIGR00484 cd01434 cd01886 cd03713 cd04088 cd16262 mobidb-lite	46

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	10.00