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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0270919 |
| Transcript ID | Lj0g3v0270919.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: elongation factor G, chloroplastic-like [Glycine max] gi|356563292|ref|XP_003549898.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 80 | 262 | 183 | 0 | – | |
| PANTHER | 80 | 262 | 183 | 0 | – | |
| Hamap | 85 | 782 | 698 | 69.096 | ||
| TIGRFAM | 88 | 777 | 690 | 0 | ||
| SUPERFAMILY | 91 | 366 | 276 | 1.07E-109 | ||
| Hamap | 91 | 777 | 687 | 106.665 | ||
| Gene3D | 92 | 371 | 280 | 7.00E-103 | ||
| ProSiteProfiles | 93 | 368 | 276 | 81.206 | ||
| Pfam | 94 | 366 | 273 | 1.50E-69 | – | |
| TIGRFAM | 95 | 265 | 171 | 4.50E-33 | ||
| CDD | 97 | 367 | 271 | 7.63E-180 | – | |
| PRINTS | 97 | 110 | 14 | 9.60E-16 | ||
| ProSitePatterns | 136 | 151 | 16 | – | ||
| PRINTS | 143 | 151 | 9 | 9.60E-16 | ||
| PRINTS | 163 | 173 | 11 | 9.60E-16 | ||
| PRINTS | 179 | 190 | 12 | 9.60E-16 | ||
| PRINTS | 215 | 224 | 10 | 9.60E-16 | ||
| PANTHER | 339 | 367 | 29 | 0 | – | |
| PANTHER | 339 | 367 | 29 | 0 | – | |
| SUPERFAMILY | 349 | 489 | 141 | 5.55E-37 | ||
| MobiDBLite | 370 | 390 | 21 | – | – | |
| PANTHER | 388 | 777 | 390 | 0 | – | |
| PANTHER | 388 | 777 | 390 | 0 | – | |
| Gene3D | 390 | 489 | 100 | 1.40E-36 | – | |
| CDD | 395 | 477 | 83 | 1.04E-40 | – | |
| Pfam | 409 | 476 | 68 | 1.50E-16 | ||
| SUPERFAMILY | 489 | 566 | 78 | 8.27E-24 | ||
| Pfam | 489 | 562 | 74 | 7.70E-31 | ||
| Gene3D | 490 | 565 | 76 | 1.50E-34 | – | |
| SUPERFAMILY | 564 | 684 | 121 | 2.30E-42 | ||
| Pfam | 564 | 682 | 119 | 4.70E-45 | ||
| SMART | 565 | 683 | 119 | 7.70E-66 | ||
| CDD | 568 | 683 | 116 | 7.77E-67 | ||
| Gene3D | 569 | 682 | 114 | 9.00E-48 | ||
| Gene3D | 683 | 778 | 96 | 8.00E-28 | ||
| SMART | 685 | 773 | 89 | 7.00E-42 | ||
| Pfam | 686 | 772 | 87 | 8.80E-25 | ||
| SUPERFAMILY | 688 | 777 | 90 | 1.25E-24 | ||
| CDD | 688 | 766 | 79 | 4.64E-34 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Translation elongation factor activity | Functions in chain elongation during polypeptide synthesis at the ribosome. | ||
| Molecular function | GTPase activity | Catalysis of the reaction: GTP + H2O = GDP + phosphate. | ||
| Molecular function | GTP binding | Interacting selectively and non-covalently with GTP, guanosine triphosphate. | ||
| Biological process | Translational elongation | The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis. | ||
| Cellular component | Chloroplast | A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma. |
Expression pattern of Lj0g3v0270919.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0270919.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.