Domain Predictions — View

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cd01886

Source: CDD

Description

EF-G

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 12

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0270919.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: elongation factor G, chloroplastic-like [Glycine max] gi\|356563292\|ref\|XP_003549898.1\|	Domains G3DSA:2.40.30.10 G3DSA:3.30.230.10 G3DSA:3.30.70.240 G3DSA:3.30.70.870 G3DSA:3.40.50.300 IPR000640 IPR000795 IPR004161 IPR004540 IPR005225 IPR005517 IPR009000 IPR009022 IPR014721 IPR020568 IPR027417 IPR030848 IPR031157 MF_00054_B MF_03063 PF00009 PF00679 PF03144 PF03764 PF14492 PR00315 PS00301 PS51722 PTHR23115 PTHR23115:SF66 SM00838 SM00889 SSF50447 SSF52540 SSF54211 SSF54980 TIGR00231 TIGR00484 cd01434 cd01886 cd03713 cd04088 mobidb-lite	43
LotjaGi1g1v0600400.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Elongation factor G; TAIR: AT1G45332.1 Translation elongation factor EFG/EF2 protein; Swiss-Prot: sp\|Q9C641\|EFGM1_ARATH Elongation factor G-1, mitochondrial; TrEMBL-Plants: tr\|A0A151SGJ9\|A0A151SGJ9_CAJCA Elongation factor G, mitochondrial; Found in the gene: LotjaGi1g1v0600400	Domains G3DSA:2.40.30.10 G3DSA:3.40.50.300 IPR000795 IPR005225 IPR009000 IPR027417 IPR031157 PF00009 PR00315 PS00301 PS51722 PTHR43636 SSF50447 SSF52540 TIGR00231 cd01886	16
LotjaGi1g1v0600400.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Elongation factor G; TAIR: AT2G45030.1 Translation elongation factor EFG/EF2 protein; Swiss-Prot: sp\|F4IW10\|EFGM2_ARATH Elongation factor G-2, mitochondrial; TrEMBL-Plants: tr\|A0A0S3RVP1\|A0A0S3RVP1_PHAAN Elongation factor G, mitochondrial; Found in the gene: LotjaGi1g1v0600400	Domains Coil G3DSA:2.40.30.10 G3DSA:3.30.230.10 G3DSA:3.30.70.240 G3DSA:3.30.70.870 G3DSA:3.40.50.300 IPR000640 IPR000795 IPR004161 IPR004540 IPR005225 IPR005517 IPR009000 IPR009022 IPR014721 IPR020568 IPR027417 IPR031157 IPR035647 IPR035649 IPR041095 MF_00054_B NON_CYTOPLASMIC_DOMAIN PF00009 PF00679 PF03144 PF03764 PF14492 PR00315 PS00301 PS51722 PTHR43636 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00838 SM00889 SSF50447 SSF52540 SSF54211 SSF54980 SignalP-TM SignalP-noTM TIGR00231 TIGR00484 cd01434 cd01886 cd04091 cd04097 cd16262	51
LotjaGi1g1v0600400.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Elongation factor G; TAIR: AT2G45030.1 Translation elongation factor EFG/EF2 protein; Swiss-Prot: sp\|F4IW10\|EFGM2_ARATH Elongation factor G-2, mitochondrial; TrEMBL-Plants: tr\|A0A0S3RVP1\|A0A0S3RVP1_PHAAN Elongation factor G, mitochondrial; Found in the gene: LotjaGi1g1v0600400	Domains G3DSA:2.40.30.10 G3DSA:3.30.230.10 G3DSA:3.30.70.240 G3DSA:3.30.70.870 G3DSA:3.40.50.300 IPR000640 IPR000795 IPR004161 IPR004540 IPR005225 IPR005517 IPR009000 IPR014721 IPR020568 IPR027417 IPR031157 IPR035647 IPR035649 IPR041095 MF_00054_B NON_CYTOPLASMIC_DOMAIN PF00009 PF00679 PF03144 PF03764 PF14492 PR00315 PS00301 PS51722 PTHR43636 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00838 SM00889 SSF50447 SSF52540 SSF54211 SSF54980 SignalP-TM SignalP-noTM TIGR00231 cd01434 cd01886 cd04091 cd04097	47
LotjaGi1g1v0600400.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Elongation factor G; TAIR: AT2G45030.1 Translation elongation factor EFG/EF2 protein; Swiss-Prot: sp\|F4IW10\|EFGM2_ARATH Elongation factor G-2, mitochondrial; TrEMBL-Plants: tr\|A0A0S3RVP1\|A0A0S3RVP1_PHAAN Elongation factor G, mitochondrial; Found in the gene: LotjaGi1g1v0600400	Domains G3DSA:2.40.30.10 G3DSA:3.30.230.10 G3DSA:3.30.70.240 G3DSA:3.40.50.300 IPR000640 IPR000795 IPR004161 IPR004540 IPR005225 IPR005517 IPR009000 IPR014721 IPR020568 IPR027417 IPR031157 IPR035647 IPR035649 IPR041095 MF_00054_B NON_CYTOPLASMIC_DOMAIN PF00009 PF00679 PF03144 PF03764 PF14492 PR00315 PS00301 PS51722 PTHR43636 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00838 SM00889 SSF50447 SSF52540 SSF54211 SSF54980 SignalP-TM SignalP-noTM TIGR00231 cd01886 cd04091 cd04097	45
LotjaGi1g1v0600400.5 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Elongation factor G; TAIR: AT2G45030.1 Translation elongation factor EFG/EF2 protein; Swiss-Prot: sp\|F4IW10\|EFGM2_ARATH Elongation factor G-2, mitochondrial; TrEMBL-Plants: tr\|A0A0S3RVP1\|A0A0S3RVP1_PHAAN Elongation factor G, mitochondrial; Found in the gene: LotjaGi1g1v0600400	Domains G3DSA:2.40.30.10 G3DSA:3.30.230.10 G3DSA:3.30.70.240 G3DSA:3.30.70.870 G3DSA:3.40.50.300 IPR000640 IPR000795 IPR004161 IPR004540 IPR005225 IPR005517 IPR009000 IPR009022 IPR014721 IPR020568 IPR027417 IPR031157 IPR035647 IPR035649 IPR041095 MF_00054_B NON_CYTOPLASMIC_DOMAIN PF00009 PF00679 PF03144 PF03764 PF14492 PR00315 PS00301 PS51722 PTHR43636 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00838 SM00889 SSF50447 SSF52540 SSF54211 SSF54980 SignalP-TM SignalP-noTM TIGR00231 cd01434 cd01886 cd04091 cd04097 cd16262	49
LotjaGi1g1v0600400.6 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Elongation factor G; TAIR: AT2G45030.1 Translation elongation factor EFG/EF2 protein; Swiss-Prot: sp\|F4IW10\|EFGM2_ARATH Elongation factor G-2, mitochondrial; TrEMBL-Plants: tr\|A0A0S3RVP1\|A0A0S3RVP1_PHAAN Elongation factor G, mitochondrial; Found in the gene: LotjaGi1g1v0600400	Domains Coil G3DSA:2.40.30.10 G3DSA:3.30.230.10 G3DSA:3.30.70.240 G3DSA:3.30.70.870 G3DSA:3.40.50.300 IPR000640 IPR000795 IPR004161 IPR004540 IPR005225 IPR005517 IPR009000 IPR009022 IPR014721 IPR020568 IPR027417 IPR031157 IPR035647 IPR035649 IPR041095 MF_00054_B NON_CYTOPLASMIC_DOMAIN PF00009 PF00679 PF03144 PF03764 PF14492 PR00315 PS00301 PS51722 PTHR43636 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00838 SM00889 SSF50447 SSF52540 SSF54211 SSF54980 SignalP-TM SignalP-noTM TIGR00231 TIGR00484 cd01434 cd01886 cd04091 cd04097 cd16262	51
LotjaGi1g1v0600400.7 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Elongation factor G; TAIR: AT2G45030.1 Translation elongation factor EFG/EF2 protein; Swiss-Prot: sp\|F4IW10\|EFGM2_ARATH Elongation factor G-2, mitochondrial; TrEMBL-Plants: tr\|V7B4Z6\|V7B4Z6_PHAVU Elongation factor G, mitochondrial; Found in the gene: LotjaGi1g1v0600400	Domains G3DSA:2.40.30.10 G3DSA:3.30.230.10 G3DSA:3.30.70.240 G3DSA:3.30.70.870 G3DSA:3.40.50.300 IPR000795 IPR004161 IPR004540 IPR005225 IPR005517 IPR009000 IPR009022 IPR014721 IPR020568 IPR027417 IPR031157 IPR035647 IPR041095 MF_00054_B NON_CYTOPLASMIC_DOMAIN PF00009 PF03144 PF03764 PF14492 PR00315 PS00301 PS51722 PTHR43636 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00889 SSF50447 SSF52540 SSF54211 SSF54980 SignalP-TM SignalP-noTM TIGR00231 TIGR00484 cd01434 cd01886 cd04091 cd16262	45
LotjaGi4g1v0209900.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Elongation factor G; TAIR: AT1G62750.1 Translation elongation factor EFG/EF2 protein; Swiss-Prot: sp\|P34811\|EFGC1_SOYBN Elongation factor G-1, chloroplastic; TrEMBL-Plants: tr\|A0A151SKP1\|A0A151SKP1_CAJCA Elongation factor G, chloroplastic; Found in the gene: LotjaGi4g1v0209900	Domains G3DSA:2.40.30.10 G3DSA:3.30.230.10 G3DSA:3.30.70.240 G3DSA:3.30.70.870 G3DSA:3.40.50.300 IPR000640 IPR000795 IPR004161 IPR004540 IPR005225 IPR005517 IPR009000 IPR009022 IPR014721 IPR020568 IPR027417 IPR030848 IPR031157 IPR035647 IPR035649 IPR041095 MF_00054_B MF_03063 PF00009 PF00679 PF03144 PF03764 PF14492 PR00315 PS00301 PS51722 PTHR43261 SM00838 SM00889 SSF50447 SSF52540 SSF54211 SSF54980 TIGR00231 TIGR00484 cd01434 cd01886 cd03713 cd04088 cd16262 mobidb-lite	46
LotjaGi4g1v0209900.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Elongation factor G; TAIR: AT1G62750.1 Translation elongation factor EFG/EF2 protein; Swiss-Prot: sp\|P34811\|EFGC1_SOYBN Elongation factor G-1, chloroplastic; TrEMBL-Plants: tr\|A0A0R0FND6\|A0A0R0FND6_SOYBN Elongation factor G, chloroplastic; Found in the gene: LotjaGi4g1v0209900	Domains G3DSA:2.40.30.10 G3DSA:3.30.230.10 G3DSA:3.30.70.240 G3DSA:3.30.70.870 G3DSA:3.40.50.300 IPR000640 IPR000795 IPR004161 IPR004540 IPR005225 IPR005517 IPR009000 IPR009022 IPR014721 IPR020568 IPR027417 IPR030848 IPR031157 IPR035647 IPR035649 IPR041095 MF_00054_B MF_03063 PF00009 PF00679 PF03144 PF03764 PF14492 PR00315 PS00301 PS51722 PTHR43261 SM00838 SM00889 SSF50447 SSF52540 SSF54211 SSF54980 TIGR00231 TIGR00484 cd01434 cd01886 cd03713 cd04088 cd16262 mobidb-lite	46
LotjaGi4g1v0209900.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Elongation factor G; TAIR: AT1G62750.1 Translation elongation factor EFG/EF2 protein; Swiss-Prot: sp\|P34811\|EFGC1_SOYBN Elongation factor G-1, chloroplastic; TrEMBL-Plants: tr\|A0A0R0FND6\|A0A0R0FND6_SOYBN Elongation factor G, chloroplastic; Found in the gene: LotjaGi4g1v0209900	Domains G3DSA:2.40.30.10 G3DSA:3.30.230.10 G3DSA:3.30.70.240 G3DSA:3.30.70.870 G3DSA:3.40.50.300 IPR000640 IPR000795 IPR004161 IPR004540 IPR005225 IPR005517 IPR009000 IPR009022 IPR014721 IPR020568 IPR027417 IPR030848 IPR031157 IPR035647 IPR035649 IPR041095 MF_00054_B MF_03063 PF00009 PF00679 PF03144 PF03764 PF14492 PR00315 PS00301 PS51722 PTHR43261 SM00838 SM00889 SSF50447 SSF52540 SSF54211 SSF54980 TIGR00231 TIGR00484 cd01434 cd01886 cd03713 cd04088 cd16262 mobidb-lite	46
LotjaGi4g1v0209900.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Elongation factor G; TAIR: AT1G62750.1 Translation elongation factor EFG/EF2 protein; Swiss-Prot: sp\|P34811\|EFGC1_SOYBN Elongation factor G-1, chloroplastic; TrEMBL-Plants: tr\|A0A0R0FND6\|A0A0R0FND6_SOYBN Elongation factor G, chloroplastic; Found in the gene: LotjaGi4g1v0209900	Domains G3DSA:2.40.30.10 G3DSA:3.30.230.10 G3DSA:3.30.70.240 G3DSA:3.30.70.870 G3DSA:3.40.50.300 IPR000640 IPR000795 IPR004161 IPR004540 IPR005225 IPR005517 IPR009000 IPR009022 IPR014721 IPR020568 IPR027417 IPR030848 IPR031157 IPR035647 IPR035649 IPR041095 MF_00054_B MF_03063 PF00009 PF00679 PF03144 PF03764 PF14492 PR00315 PS00301 PS51722 PTHR43261 SM00838 SM00889 SSF50447 SSF52540 SSF54211 SSF54980 TIGR00231 TIGR00484 cd01434 cd01886 cd03713 cd04088 cd16262 mobidb-lite	46

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	8.33