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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0209900 |
| Transcript ID | LotjaGi4g1v0209900.2 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Elongation factor G; TAIR: AT1G62750.1 Translation elongation factor EFG/EF2 protein; Swiss-Prot: sp|P34811|EFGC1_SOYBN Elongation factor G-1, chloroplastic; TrEMBL-Plants: tr|A0A0R0FND6|A0A0R0FND6_SOYBN Elongation factor G, chloroplastic; Found in the gene: LotjaGi4g1v0209900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:48732252..48735402) extracted from Lotus japonicus Gifu genome v1.2.
ACGAAGCGTGCTATTCCCTTGAAGGATTATCGCAACATCGGCATCATGGCTCACATAGATGCCGGAAAGACAACTACAAC TGAAAGAATCCTCTTCTATACCGGAAGGAACTACAAAATTGGAGAGGTGCATGAGGGAACAGCAACAATGGACTGGATGG AACAGGAACAAGAAAGAGGGATTACCATTACTTCTGCTGCAACCACCACATTCTGGAATAAGCACCGGATCAACATCATT GATACTCCTGGTCATGTCGACTTTACCTTAGAAGTGGAGCGTGCTCTTAGGGTGTTGGATGGAGCTATATGCTTGTTTGA CAGTGTTGCTGGGGTGGAACCGCAATCAGAAACTGTGTGGAGACAAGCTGATAAGTATGGGGTGCCGCGAATTTGTTTTG TCAATAAAATGGACCGTCTTGGAGCAAACTTTTTCCGAACGAGAGACATGATAGTAACAAACTTAGGTGCTAAACCACTC GTACTTCAGTTGCCAATTGGTGCAGAAGATACCTTTAAGGGAGTCATCGATCTTGTTAGGATGAAAGCTATAGTTTGGTC TGGGGAAGAGCTGGGTGCCAAGTTTGATTATGTAGATATTCCAGAAGATCTTCAAGAGCTGGCCCAGGATTATCGATCCC AGATGATGGAAAATATAGTTGAGTTCGATGACCAGGTTATGGAGAACTATCTTGAAGGAATTGAACCTGATGATGAAACT ATAAAAAAATTAATTAGGAAGGGAACCATATCAGCAAGTTTTGTCCCAGTGATGTGTGGTTCAGCTTTCAAAAACAAGGG GGTCCAACCACTGCTTGATGCTGTTGTGGATTATCTGCCATCACCACTTGACTTACCACCAATGAAGGGCACTGACCCTG AAAACCCAGAAGTGACGATGGAGAGGTCAGCAAGTGATGATGAACCATTTTCTGGACTAGCTTTTAAGATCATGAGTGAT CCATTTGTAGGCACCCTTACATTTGTCAGGGTGTATGCTGGAAAGCTAAGTGCAGGGTCCTATGTGCTCAATGCTAACAA AGGGAAAAAGGAAAGAATTGGTAGACTTCTAGAAATGCATGCAAACAGCAGAGAAGATGTTAAAATTGCTTTAGCTGGGG ATATTGTTGCTCTTGCAGGTTTAAAAGATACTATTACCGGTGAAACATTATGTGACCCTGATAGTCCGATCGTGCTTGAG CGGATGGACTTCCCTGATCCTGTGATTAAAGTTGCAATTGAACCCAAAACTAAAGCTGATATTGACAGGATGGCAGCTGG TTTGGTCAAGCTTGCACAGGAAGATCCTTCTTTCCACTTCTCCCGTGATGAAGAGATAAACCAGACTGTGATTGAAGGAA TGGGAGAATTACATCTTGAAATCATTGTTGATAGATTGAAAAGAGAATTTAAGGTGATATCTTTTATTCCACTTTTGAGA ATATTCAGTTATCAGTCTGCATGTTTATGTGTGTTTAGTCTATCCTGTCTTTCAAATATGTGGCTATCCAGTATCCACCA CTGATGCTGTGGATAGAGTAGTTGCAATTACAAATAATCAGAATTGCACATTGACTTGGACTTTAGCACATTTTATAATG GTGGAACCTGTTTGCACTATTAATTATCACTTGTTACCCTTAAATTGTTAAGATAAGGAGAGTGAAGGAGTGATGTACCA TTAAAAAGTTGCGATGCTTTTGGAAATCTGTGTCTATCGTCTGATTAAGCATTATTATTGGATAATTCGTACTATTTTTT TTTCCTAGTTGTATGACTGTCCCCCTGTGAAGATCTCATTATCAATATTTGTCAATGCAGGTGGAAGCTAATGTTGGCGC TCCCCAAGTAAACTACAGGGAAAGCATTTCCAAAGTCTCGGAAGTGAAGTATGTGCACAAGAAACAATCAGGTGGACAGG GTCAGTTTGCAGATATCACCGTACGGTTTGAACCCATGGAGCCAGGTAGTGGATATGAGTTCAAGAGTGAAATCAAAGGA GGTGCTGTACCGAGGGAATACATTCCTGGCGTGATGAAAGGATTGGAAGAATGCATGAGCAATGGTGTCCTTGCGGGATT TCCAGTTGTTGATGTACGAGCTGTACTCACGGATGGTTCTTACCACGATGTAGATTCAAGCGTGCTGGCATTCCAGTTGG CAGCTAGAGGAGCTTTTCGGGAAGGAGTTAGAAAAGCTGGACCAAGAATGCTTGAACCTATAATGAAGGTTGAGGTTGTT ACTCCTGAAGAACATCTAGGTGATGTAATTGGTGATCTCAACTCAAGAAGAGGCCAAATCAACAGTTTTGGTGACAAGCC GGGTGGCCTTAAGGTACGTCAAATAACTTGGTTCTCTGTGATTATTTTATTAAATTTGAACTTTGAAGGAATGGCTTGAT AGTGCTTGTGATGTGTTGTTTGTCTGAAAATGCACAATGCTTCACGCTGATATGTTTTAGACACAATTCTAATTTTTGAG GCAACACCTGAAAATGTAAGAAAGGGGAAATGAAACATGAAAAATAAATCTCGATGCCATTCCACATAATCTCGCATAGG CCCTCGGAACCTTCTCTGAAGATAAGTCCAGAAAAAGCATTATATAACGAATGGAATCATAAGGGCATGCCACTTAGGGG GCTGTTCCCTTGTTAATCATGTAGGTTCATTTACTTATAACTTTTGTAAATCGTGTTTGGCTCAAAAAGTATGGATTTAG TGCATGTTTGGAAACCCCCTTCCACAATATATTCCGAAGGAAGAATCAATTACGGAGAGAAACTTCTGCGAGTAGCTTCC GAGTTTCCAAACCAAAGGCCTTGAGCTCGATGTAGGTCATCTATATTGATTGAGGCTTGTGACACAAATGTCTTGAACTT GTATATGAATGACTGGGTTGAAATCTGAATGAAGGCTTTTATTCTTTTTTTTCCCATGGATATTGATTTTAGTGTTTCTT CATTTTGGTGTTGGTGAACACAGGTGGTTGATTCTCTAGTACCACTCGCTGAGATGTTTCAGTACGTGAGTACACTCAGA GGGATGACAAAGGGTCGTGCATCCTACACAATGCAATTAGCCATGTTTGATGTGGTGCCTCAGCACATTCAGAACCAACT TGCCTCAAAAGAGCAAGAAGTTGCTGCTTAA
CDS sequence (LotjaGi4g1v0209900.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTCACATAGATGCCGGAAAGACAACTACAACTGAAAGAATCCTCTTCTATACCGGAAGGAACTACAAAATTGGAGA GGTGCATGAGGGAACAGCAACAATGGACTGGATGGAACAGGAACAAGAAAGAGGGATTACCATTACTTCTGCTGCAACCA CCACATTCTGGAATAAGCACCGGATCAACATCATTGATACTCCTGGTCATGTCGACTTTACCTTAGAAGTGGAGCGTGCT CTTAGGGTGTTGGATGGAGCTATATGCTTGTTTGACAGTGTTGCTGGGGTGGAACCGCAATCAGAAACTGTGTGGAGACA AGCTGATAAGTATGGGGTGCCGCGAATTTGTTTTGTCAATAAAATGGACCGTCTTGGAGCAAACTTTTTCCGAACGAGAG ACATGATAGTAACAAACTTAGGTGCTAAACCACTCGTACTTCAGTTGCCAATTGGTGCAGAAGATACCTTTAAGGGAGTC ATCGATCTTGTTAGGATGAAAGCTATAGTTTGGTCTGGGGAAGAGCTGGGTGCCAAGTTTGATTATGTAGATATTCCAGA AGATCTTCAAGAGCTGGCCCAGGATTATCGATCCCAGATGATGGAAAATATAGTTGAGTTCGATGACCAGGTTATGGAGA ACTATCTTGAAGGAATTGAACCTGATGATGAAACTATAAAAAAATTAATTAGGAAGGGAACCATATCAGCAAGTTTTGTC CCAGTGATGTGTGGTTCAGCTTTCAAAAACAAGGGGGTCCAACCACTGCTTGATGCTGTTGTGGATTATCTGCCATCACC ACTTGACTTACCACCAATGAAGGGCACTGACCCTGAAAACCCAGAAGTGACGATGGAGAGGTCAGCAAGTGATGATGAAC CATTTTCTGGACTAGCTTTTAAGATCATGAGTGATCCATTTGTAGGCACCCTTACATTTGTCAGGGTGTATGCTGGAAAG CTAAGTGCAGGGTCCTATGTGCTCAATGCTAACAAAGGGAAAAAGGAAAGAATTGGTAGACTTCTAGAAATGCATGCAAA CAGCAGAGAAGATGTTAAAATTGCTTTAGCTGGGGATATTGTTGCTCTTGCAGGTTTAAAAGATACTATTACCGGTGAAA CATTATGTGACCCTGATAGTCCGATCGTGCTTGAGCGGATGGACTTCCCTGATCCTGTGATTAAAGTTGCAATTGAACCC AAAACTAAAGCTGATATTGACAGGATGGCAGCTGGTTTGGTCAAGCTTGCACAGGAAGATCCTTCTTTCCACTTCTCCCG TGATGAAGAGATAAACCAGACTGTGATTGAAGGAATGGGAGAATTACATCTTGAAATCATTGTTGATAGATTGAAAAGAG AATTTAAGGTGGAAGCTAATGTTGGCGCTCCCCAAGTAAACTACAGGGAAAGCATTTCCAAAGTCTCGGAAGTGAAGTAT GTGCACAAGAAACAATCAGGTGGACAGGGTCAGTTTGCAGATATCACCGTACGGTTTGAACCCATGGAGCCAGGTAGTGG ATATGAGTTCAAGAGTGAAATCAAAGGAGGTGCTGTACCGAGGGAATACATTCCTGGCGTGATGAAAGGATTGGAAGAAT GCATGAGCAATGGTGTCCTTGCGGGATTTCCAGTTGTTGATGTACGAGCTGTACTCACGGATGGTTCTTACCACGATGTA GATTCAAGCGTGCTGGCATTCCAGTTGGCAGCTAGAGGAGCTTTTCGGGAAGGAGTTAGAAAAGCTGGACCAAGAATGCT TGAACCTATAATGAAGGTTGAGGTTGTTACTCCTGAAGAACATCTAGGTGATGTAATTGGTGATCTCAACTCAAGAAGAG GCCAAATCAACAGTTTTGGTGACAAGCCGGGTGGCCTTAAGGTGGTTGATTCTCTAGTACCACTCGCTGAGATGTTTCAG TACGTGAGTACACTCAGAGGGATGACAAAGGGTCGTGCATCCTACACAATGCAATTAGCCATGTTTGATGTGGTGCCTCA GCACATTCAGAACCAACTTGCCTCAAAAGAGCAAGAAGTTGCTGCTTAA
Protein sequence (LotjaGi4g1v0209900.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAHIDAGKTTTTERILFYTGRNYKIGEVHEGTATMDWMEQEQERGITITSAATTTFWNKHRINIIDTPGHVDFTLEVERA LRVLDGAICLFDSVAGVEPQSETVWRQADKYGVPRICFVNKMDRLGANFFRTRDMIVTNLGAKPLVLQLPIGAEDTFKGV IDLVRMKAIVWSGEELGAKFDYVDIPEDLQELAQDYRSQMMENIVEFDDQVMENYLEGIEPDDETIKKLIRKGTISASFV PVMCGSAFKNKGVQPLLDAVVDYLPSPLDLPPMKGTDPENPEVTMERSASDDEPFSGLAFKIMSDPFVGTLTFVRVYAGK LSAGSYVLNANKGKKERIGRLLEMHANSREDVKIALAGDIVALAGLKDTITGETLCDPDSPIVLERMDFPDPVIKVAIEP KTKADIDRMAAGLVKLAQEDPSFHFSRDEEINQTVIEGMGELHLEIIVDRLKREFKVEANVGAPQVNYRESISKVSEVKY VHKKQSGGQGQFADITVRFEPMEPGSGYEFKSEIKGGAVPREYIPGVMKGLEECMSNGVLAGFPVVDVRAVLTDGSYHDV DSSVLAFQLAARGAFREGVRKAGPRMLEPIMKVEVVTPEEHLGDVIGDLNSRRGQINSFGDKPGGLKVVDSLVPLAEMFQ YVSTLRGMTKGRASYTMQLAMFDVVPQHIQNQLASKEQEVAA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 676 | 676 | 0.0 | – | |
| Hamap | 1 | 682 | 682 | 67.236 | ||
| SUPERFAMILY | 1 | 266 | 266 | 7.8E-105 | ||
| TIGRFAM | 1 | 165 | 165 | 6.4E-30 | ||
| Hamap | 1 | 677 | 677 | 106.355 | ||
| TIGRFAM | 1 | 677 | 677 | 0.0 | ||
| ProSiteProfiles | 1 | 268 | 268 | 77.62 | ||
| Pfam | 1 | 266 | 266 | 7.3E-66 | ||
| CDD | 1 | 267 | 267 | 3.73692E-177 | – | |
| Gene3D | 1 | 276 | 276 | 2.5E-108 | – | |
| ProSitePatterns | 36 | 51 | 16 | - | ||
| PRINTS | 43 | 51 | 9 | 6.5E-9 | ||
| PRINTS | 63 | 73 | 11 | 6.5E-9 | ||
| PRINTS | 79 | 90 | 12 | 6.5E-9 | ||
| PRINTS | 115 | 124 | 10 | 6.5E-9 | ||
| SUPERFAMILY | 249 | 389 | 141 | 4.29E-37 | ||
| MobiDBLite | 270 | 290 | 21 | - | – | |
| Gene3D | 277 | 390 | 114 | 1.5E-43 | – | |
| CDD | 295 | 377 | 83 | 7.49737E-45 | – | |
| Pfam | 309 | 376 | 68 | 1.4E-16 | ||
| Pfam | 389 | 462 | 74 | 7.2E-31 | ||
| SUPERFAMILY | 389 | 466 | 78 | 6.83E-24 | ||
| CDD | 390 | 465 | 76 | 2.67358E-40 | ||
| Gene3D | 391 | 465 | 75 | 2.7E-29 | – | |
| SUPERFAMILY | 464 | 584 | 121 | 9.61E-43 | ||
| Pfam | 464 | 582 | 119 | 2.9E-45 | ||
| SMART | 465 | 583 | 119 | 4.2E-66 | ||
| CDD | 468 | 583 | 116 | 1.13395E-68 | ||
| Gene3D | 469 | 672 | 204 | 1.7E-83 | ||
| SMART | 585 | 673 | 89 | 7.0E-42 | ||
| Pfam | 586 | 672 | 87 | 8.8E-25 | ||
| SUPERFAMILY | 588 | 677 | 90 | 1.06E-24 | ||
| CDD | 588 | 666 | 79 | 8.74046E-35 | ||
| Gene3D | 589 | 660 | 72 | 1.7E-83 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Translation elongation factor activity | Functions in chain elongation during polypeptide synthesis at the ribosome. | ||
| Molecular function | GTPase activity | Catalysis of the reaction: GTP + H2O = GDP + phosphate. | ||
| Molecular function | GTP binding | Interacting selectively and non-covalently with GTP, guanosine triphosphate. | ||
| Biological process | Translational elongation | The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis. | ||
| Cellular component | Chloroplast | A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma. |
Expression pattern of LotjaGi4g1v0209900.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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