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cd02669

Source: CDD

Description

Peptidase_C19M

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0000245
Biological process Spliceosomal complex assembly The aggregation, arrangement and bonding together of a spliceosomal complex, a ribonucleoprotein apparatus that catalyzes nuclear mRNA splicing via transesterification reactions.
Subterm of
Part of
GO:0006397
Biological process MRNA processing Any process involved in the conversion of a primary mRNA transcript into one or more mature mRNA(s) prior to translation into polypeptide.
Subterm of

Associated Lotus transcripts 6

Transcript Name Description Predicted domains Domain count
Lj6g3v1984610.1
– PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2-like [Glycine max] gi|356534252|ref|XP_003535671.1|
Domains
18
Lj6g3v1984610.2
– PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2-like [Glycine max] gi|356534252|ref|XP_003535671.1|
Domains
18
LotjaGi2g1v0388200.1
– Ubiquitin carboxyl-terminal hydrolase; TAIR: AT4G22350.2 Ubiquitin C-terminal hydrolases superfamily protein; Swiss-Prot: sp|Q53GS9|SNUT2_HUMAN U4/U6.U5 tri-snRNP-associated protein 2; TrEMBL-Plants: tr|V7BEY8|V7BEY8_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0388200
Domains
19
LotjaGi2g1v0388200.2
– Ubiquitin carboxyl-terminal hydrolase; TAIR: AT4G22350.2 Ubiquitin C-terminal hydrolases superfamily protein; Swiss-Prot: sp|Q53GS9|SNUT2_HUMAN U4/U6.U5 tri-snRNP-associated protein 2; TrEMBL-Plants: tr|V7BEY8|V7BEY8_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0388200
Domains
19
LotjaGi2g1v0388200.3
– Ubiquitin carboxyl-terminal hydrolase; TAIR: AT4G22350.2 Ubiquitin C-terminal hydrolases superfamily protein; Swiss-Prot: sp|Q3TIX9|SNUT2_MOUSE U4/U6.U5 tri-snRNP-associated protein 2; TrEMBL-Plants: tr|V7BEY8|V7BEY8_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0388200
Domains
19
LotjaGi6g1v0321900.2
– Ubiquitin carboxyl-terminal hydrolase; TAIR: AT4G22350.2 Ubiquitin C-terminal hydrolases superfamily protein; Swiss-Prot: sp|Q3TIX9|SNUT2_MOUSE U4/U6.U5 tri-snRNP-associated protein 2; TrEMBL-Plants: tr|V7BEY8|V7BEY8_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0321900
Domains
20

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 16.67